RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C PAC2P39937 518 aa4.09□□□□□ -1.75
GDE1YPL110C MIT1P40002 666 aa4.09□□□□□ -1.75
GDE1YPL110C PRE6P40303 254 aaKnown RBP4.09□□□□□ -1.75
GDE1YPL110C YIL152WP40455 235 aa4.09□□□□□ -1.75
GDE1YPL110C RIB4P50861 169 aaPredicted RBP4.09□□□□□ -1.75
GDE1YPL110C ERV29P53337 310 aa4.09□□□□□ -1.75
GDE1YPL110C ELP4Q02884 456 aaKnown RBP4.09□□□□□ -1.75
GDE1YPL110C UPS3Q04006 179 aa4.09□□□□□ -1.75
GDE1YPL110C IRC13Q08630 104 aa4.09□□□□□ -1.75
GDE1YPL110C RAD28Q12021 506 aa4.09□□□□□ -1.75
GDE1YPL110C UBX3Q12229 455 aa4.09□□□□□ -1.75
GDE1YPL110C YLR126CQ12288 251 aa4.09□□□□□ -1.75
GDE1YPL110C CTF3Q12748 733 aa4.09□□□□□ -1.75
GDE1YPL110C ISD11Q6Q560 94 aa4.09□□□□□ -1.75
GDE1YPL110C CYC1P00044 109 aaPredicted RBP4.09□□□□□ -1.75
GDE1YPL110C DPM1P14020 267 aaKnown RBP4.09□□□□□ -1.75
GDE1YPL110C CPR2P23285 205 aa4.09□□□□□ -1.75
GDE1YPL110C LSB5P25369 354 aa4.09□□□□□ -1.75
GDE1YPL110C INO2P26798 304 aa4.09□□□□□ -1.75
GDE1YPL110C EMC3P36039 253 aa4.09□□□□□ -1.75
GDE1YPL110C RIB1P38066 345 aa4.09□□□□□ -1.75
GDE1YPL110C PPE1P38796 400 aa4.09□□□□□ -1.75
GDE1YPL110C YAR028WP39548 234 aa4.09□□□□□ -1.75
GDE1YPL110C COX15P40086 486 aa4.09□□□□□ -1.75
GDE1YPL110C HXT10P43581 546 aa4.09□□□□□ -1.75
GDE1YPL110C YJL118WP47022 219 aa4.09□□□□□ -1.75
GDE1YPL110C EXG2P52911 562 aa4.09□□□□□ -1.75
GDE1YPL110C TIM13P53299 105 aa4.09□□□□□ -1.75
GDE1YPL110C SMX3P54999 86 aaPredicted RBP4.09□□□□□ -1.75
GDE1YPL110C APS2Q00381 147 aa4.09□□□□□ -1.75
GDE1YPL110C CYT2Q00873 224 aa4.09□□□□□ -1.75
GDE1YPL110C CNL1Q06333 122 aa4.09□□□□□ -1.75
GDE1YPL110C SUE1Q06524 206 aa4.09□□□□□ -1.75
GDE1YPL110C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.09□□□□□ -1.75not detected
GDE1YPL110C FCF2Q12035 217 aaPredicted RBP4.09□□□□□ -1.75
GDE1YPL110C ISU2Q12056 156 aa4.09□□□□□ -1.75
GDE1YPL110C SWT1Q12104 458 aa4.09□□□□□ -1.75
GDE1YPL110C PRR2Q12310 699 aa4.09□□□□□ -1.75
GDE1YPL110C PRM4Q12498 284 aa4.09□□□□□ -1.75
GDE1YPL110C NFS1P25374 497 aa4.09□□□□□ -1.76
GDE1YPL110C TUL1P36096 758 aa4.09□□□□□ -1.76
GDE1YPL110C ECM21P38167 1117 aaKnown RBP4.09□□□□□ -1.76
GDE1YPL110C DOG1P38774 246 aa4.09□□□□□ -1.76
GDE1YPL110C TOS3P43637 560 aa4.09□□□□□ -1.76
GDE1YPL110C DUS1P53759 423 aaKnown RBP4.09□□□□□ -1.76
GDE1YPL110C YNL260CP53846 198 aa4.09□□□□□ -1.76
GDE1YPL110C MHT1Q12525 324 aa4.09□□□□□ -1.76
GDE1YPL110C YNR034W-AQ3E841 98 aa4.09□□□□□ -1.76
GDE1YPL110C MES1P00958 751 aaKnown RBP4.08□□□□□ -1.76
GDE1YPL110C RPS31P05759 152 aaKnown RBP4.08□□□□□ -1.76
GDE1YPL110C PHO90P39535 881 aa4.08□□□□□ -1.76
GDE1YPL110C NPP2P39997 493 aa4.08□□□□□ -1.76
GDE1YPL110C SCS3P53012 380 aa4.08□□□□□ -1.76
GDE1YPL110C JAC1P53193 184 aa4.08□□□□□ -1.76
GDE1YPL110C SPP2Q02521 185 aa4.08□□□□□ -1.76
GDE1YPL110C MRPL35Q06678 367 aa4.08□□□□□ -1.76
GDE1YPL110C AIM39Q08223 395 aa4.08□□□□□ -1.76
GDE1YPL110C YPL260WQ08977 551 aa4.08□□□□□ -1.76
GDE1YPL110C POM34Q12445 299 aa4.08□□□□□ -1.76
GDE1YPL110C CYC3P06182 269 aa4.08□□□□□ -1.76
GDE1YPL110C ERG6P25087 383 aaKnown RBP4.08□□□□□ -1.76
GDE1YPL110C CWP1P28319 239 aa4.08□□□□□ -1.76
GDE1YPL110C TFA2P36145 328 aa4.08□□□□□ -1.76
GDE1YPL110C MRPL28P36527 147 aa4.08□□□□□ -1.76
GDE1YPL110C BNA5Q05979 453 aa4.08□□□□□ -1.76
GDE1YPL110C XYL2Q07993 356 aa4.08□□□□□ -1.76
GDE1YPL110C RDR1Q08904 546 aa4.08□□□□□ -1.76
GDE1YPL110C YCT1Q12235 531 aa4.08□□□□□ -1.76
GDE1YPL110C TPI1P00942 248 aaKnown RBP4.08□□□□□ -1.76
GDE1YPL110C AAC1P04710 309 aa4.08□□□□□ -1.76
GDE1YPL110C MSW1P04803 379 aa4.08□□□□□ -1.76
GDE1YPL110C ADH3P07246 375 aaKnown RBP4.08□□□□□ -1.76
GDE1YPL110C YCL068CP25593 260 aa4.08□□□□□ -1.76
GDE1YPL110C PPZ1P26570 692 aa4.08□□□□□ -1.76
GDE1YPL110C ERV1P27882 189 aa4.08□□□□□ -1.76
GDE1YPL110C WBP1P33767 430 aaKnown RBP4.08□□□□□ -1.76
GDE1YPL110C YKL151CP36059 337 aa4.08□□□□□ -1.76
GDE1YPL110C YHR033WP38690 423 aa4.08□□□□□ -1.76
GDE1YPL110C BMT5P40493 336 aa4.08□□□□□ -1.76
GDE1YPL110C YFL040WP43562 540 aa4.08□□□□□ -1.76
GDE1YPL110C UBC9P50623 157 aaPredicted RBP4.08□□□□□ -1.76
GDE1YPL110C YNR014WP53719 212 aa4.08□□□□□ -1.76
GDE1YPL110C YDR415CQ04033 374 aaPredicted RBP4.08□□□□□ -1.76
GDE1YPL110C YLL056CQ12177 298 aa4.08□□□□□ -1.76
GDE1YPL110C CAR1P00812 333 aaKnown RBP4.07□□□□□ -1.76
GDE1YPL110C CDC21P06785 304 aa4.07□□□□□ -1.76
GDE1YPL110C SRY1P36007 326 aa4.07□□□□□ -1.76
GDE1YPL110C PRY2P36110 329 aa4.07□□□□□ -1.76
GDE1YPL110C YKR075CP36155 307 aa4.07□□□□□ -1.76
GDE1YPL110C LDB7P38210 180 aa4.07□□□□□ -1.76
GDE1YPL110C TOS1P38288 455 aa4.07□□□□□ -1.76
GDE1YPL110C MIC12P38341 106 aa4.07□□□□□ -1.76
GDE1YPL110C PNT1P38969 423 aa4.07□□□□□ -1.76
GDE1YPL110C TIF34P40217 347 aaKnown RBP4.07□□□□□ -1.76
GDE1YPL110C FKH2P41813 862 aa4.07□□□□□ -1.76
GDE1YPL110C YHM2Q04013 314 aa4.07□□□□□ -1.76
GDE1YPL110C MMT2Q08970 484 aa4.07□□□□□ -1.76
GDE1YPL110C YOR029WQ12243 111 aa4.07□□□□□ -1.76
GDE1YPL110C BI3Q9ZZW7 517 aa4.07□□□□□ -1.76
GDE1YPL110C RPB3P16370 318 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms