RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeast

Gene KSH1, Length 219 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KSH1	YNL024C-A	PAM16	P42949	149 aa		5.76	□□□□□ -1.49
KSH1	YNL024C-A	LOH1	P47055	219 aa		5.76	□□□□□ -1.49
KSH1	YNL024C-A	YJR120W	P47157	116 aa		5.76	□□□□□ -1.49
KSH1	YNL024C-A	PMT3	P47190	753 aa		5.76	□□□□□ -1.49
KSH1	YNL024C-A	LYS20	P48570	428 aa	Known RBP	5.76	□□□□□ -1.49
KSH1	YNL024C-A	YGR126W	P53274	230 aa		5.76	□□□□□ -1.49
KSH1	YNL024C-A	PDR16	P53860	351 aa	Known RBP	5.76	□□□□□ -1.49
KSH1	YNL024C-A	SAM50	P53969	484 aa		5.76	□□□□□ -1.49
KSH1	YNL024C-A	SMX3	P54999	86 aa	Predicted RBP	5.76	□□□□□ -1.49
KSH1	YNL024C-A	TRS23	Q03784	219 aa		5.76	□□□□□ -1.49
KSH1	YNL024C-A	TDA6	Q06466	467 aa		5.76	□□□□□ -1.49
KSH1	YNL024C-A	YNG1	Q08465	219 aa		5.76	□□□□□ -1.49
KSH1	YNL024C-A	LYS21	Q12122	440 aa	Known RBP	5.76	□□□□□ -1.49
KSH1	YNL024C-A	ORT1	Q12375	292 aa		5.76	□□□□□ -1.49
KSH1	YNL024C-A	RTR2	Q12378	196 aa		5.76	□□□□□ -1.49
KSH1	YNL024C-A	TRM13	Q12383	476 aa		5.76	□□□□□ -1.49
KSH1	YNL024C-A	TRA1	P38811	3744 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	RPP1A	P05318	106 aa	Predicted RBP	5.75	□□□□□ -1.49
KSH1	YNL024C-A	PPA2	P28239	310 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	MCM10	P32354	571 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	SSH1	P38353	490 aa	Known RBP	5.75	□□□□□ -1.49
KSH1	YNL024C-A	YNL208W	P40159	199 aa	Known RBP	5.75	□□□□□ -1.49
KSH1	YNL024C-A	AVT7	P40501	490 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	NAS2	P40555	220 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	CAT5	P41735	233 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	ERJ5	P43613	295 aa	Predicted RBP	5.75	□□□□□ -1.49
KSH1	YNL024C-A	UBX6	P47049	396 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	SNX4	P47057	423 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	ECM27	P47144	725 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	SKP1	P52286	194 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	BRR6	P53062	197 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	POP6	P53218	158 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	NRK1	P53915	240 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	DIG2	Q03373	323 aa	Known RBP	5.75	□□□□□ -1.49
KSH1	YNL024C-A	HNT1	Q04344	158 aa	Known RBP	5.75	□□□□□ -1.49
KSH1	YNL024C-A	SRL2	Q12020	392 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	SWM1	Q12379	170 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	PRM4	Q12498	284 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	YPR053C	Q6Q5F3	151 aa		5.75	□□□□□ -1.49
KSH1	YNL024C-A	KRR1	P25586	316 aa	Predicted RBP	5.74	□□□□□ -1.49
KSH1	YNL024C-A	RFA3	P26755	122 aa	Known RBP	5.74	□□□□□ -1.49
KSH1	YNL024C-A	RNP1	P32385	249 aa		5.74	□□□□□ -1.49
KSH1	YNL024C-A	PTI1	P39927	425 aa	Predicted RBP	5.74	□□□□□ -1.49
KSH1	YNL024C-A	REE1	P40893	198 aa		5.74	□□□□□ -1.49
KSH1	YNL024C-A	IDP2	P41939	412 aa		5.74	□□□□□ -1.49
KSH1	YNL024C-A	GPI14	P47088	403 aa	Known RBP	5.74	□□□□□ -1.49
KSH1	YNL024C-A	GTF1	P53260	183 aa	Predicted RBP	5.74	□□□□□ -1.49
KSH1	YNL024C-A	HOL1	P53389	586 aa		5.74	□□□□□ -1.49
KSH1	YNL024C-A	AAH1	P53909	347 aa		5.74	□□□□□ -1.49
KSH1	YNL024C-A	ASI3	P53983	676 aa		5.74	□□□□□ -1.49
KSH1	YNL024C-A	PET191	Q02772	108 aa		5.74	□□□□□ -1.49
KSH1	YNL024C-A	PLP1	Q04004	230 aa		5.74	□□□□□ -1.49
KSH1	YNL024C-A	GAS2	Q06135	555 aa		5.74	□□□□□ -1.49
KSH1	YNL024C-A	RDI1	Q12434	202 aa		5.74	□□□□□ -1.49
KSH1	YNL024C-A	YBR056W-A	I2HB52	66 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	PUT1	P09368	476 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	URA6	P15700	204 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	STE18	P18852	110 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	PUP1	P25043	261 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	CPR4	P25334	318 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	PET18	P25362	215 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	DBF20	P32328	564 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	YPC1	P38298	316 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	GRE3	P38715	327 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
KSH1	YNL024C-A	SHO1	P40073	367 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	MRPL19	P53875	158 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	ATG21	Q02887	496 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	SDC1	Q03323	175 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	NMA1	Q06178	401 aa	Known RBP	5.73	□□□□□ -1.49
KSH1	YNL024C-A	RAX1	Q08760	435 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	YHR214C-E	Q8TGK0	99 aa		5.73	□□□□□ -1.49
KSH1	YNL024C-A	TDH2	P00358	332 aa	Known RBP	5.72	□□□□□ -1.49
KSH1	YNL024C-A	RPL3	P14126	387 aa	Known RBP	5.72	□□□□□ -1.49
KSH1	YNL024C-A	GRX2	P17695	143 aa	Known RBP	5.72	□□□□□ -1.49
KSH1	YNL024C-A	SEC62	P21825	274 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	CPR2	P23285	205 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	HXT2	P23585	541 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	YCP4	P25349	247 aa	Known RBP	5.72	□□□□□ -1.49
KSH1	YNL024C-A	NFS1	P25374	497 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	MRP17	P28778	131 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	ACB1	P31787	87 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	AIM46	P38885	310 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	SER3	P40054	469 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	NIT2	P47016	307 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	MSY1	P48527	492 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	HSV2	P50079	448 aa	Predicted RBP	5.72	□□□□□ -1.49
KSH1	YNL024C-A	YGR066C	P53242	292 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	RSM27	P53305	110 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	BSC5	P53755	489 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	SUR7	P54003	302 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	RSM23	Q01163	450 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	PRM15	Q03262	622 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	NUP53	Q03790	475 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	YDR387C	Q04162	555 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	CTS2	Q06350	511 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	YLR031W	Q07978	186 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	HMS1	Q12398	434 aa		5.72	□□□□□ -1.49
KSH1	YNL024C-A	FUR4	P05316	633 aa	Known RBP	5.71	□□□□□ -1.5
KSH1	YNL024C-A	CDC36	P06100	191 aa	Predicted RBP	5.71	□□□□□ -1.5
KSH1	YNL024C-A	YFR010W-A	P0C5N0	62 aa		5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 106.3 ms