RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W USE1P53146 245 aa3.45□□□□□ -1.86
PUB1YNL016W SWC4P53201 476 aa3.45□□□□□ -1.86
PUB1YNL016W SNX41Q04053 625 aa3.45□□□□□ -1.86
PUB1YNL016W PEX12Q04370 399 aa3.45□□□□□ -1.86
PUB1YNL016W CTR3Q06686 241 aa3.45□□□□□ -1.86
PUB1YNL016W SNA4Q07549 140 aa3.45□□□□□ -1.86
PUB1YNL016W TIM18Q08749 192 aa3.45□□□□□ -1.86
PUB1YNL016W PFA4Q12006 378 aa3.45□□□□□ -1.86
PUB1YNL016W YDL109CQ12103 647 aa3.45□□□□□ -1.86
PUB1YNL016W YDL009CQ12210 107 aa3.45□□□□□ -1.86
PUB1YNL016W YCT1Q12235 531 aa3.45□□□□□ -1.86
PUB1YNL016W JLP1Q12358 412 aa3.45□□□□□ -1.86
PUB1YNL016W TFS1P14306 219 aa3.44□□□□□ -1.86
PUB1YNL016W URA6P15700 204 aa3.44□□□□□ -1.86
PUB1YNL016W EHD3P28817 500 aa3.44□□□□□ -1.86
PUB1YNL016W DEP1P31385 405 aa3.44□□□□□ -1.86
PUB1YNL016W YMC1P32331 307 aa3.44□□□□□ -1.86
PUB1YNL016W NTF2P33331 125 aaKnown RBP3.44□□□□□ -1.86
PUB1YNL016W NUF2P33895 451 aa3.44□□□□□ -1.86
PUB1YNL016W YBR241CP38142 488 aa3.44□□□□□ -1.86
PUB1YNL016W APD1P38281 316 aa3.44□□□□□ -1.86
PUB1YNL016W CUE1P38428 203 aa3.44□□□□□ -1.86
PUB1YNL016W SRP14P38985 146 aa3.44□□□□□ -1.86
PUB1YNL016W YAT2P40017 923 aa3.44□□□□□ -1.86
PUB1YNL016W BMT5P40493 336 aa3.44□□□□□ -1.86
PUB1YNL016W TES1P41903 349 aaKnown RBP3.44□□□□□ -1.86
PUB1YNL016W NBP35P52920 328 aa3.44□□□□□ -1.86
PUB1YNL016W NSA1P53136 463 aaPredicted RBP3.44□□□□□ -1.86
PUB1YNL016W CDH1P53197 566 aa3.44□□□□□ -1.86
PUB1YNL016W MAL13P53338 473 aa3.44□□□□□ -1.86
PUB1YNL016W IRC15Q02733 499 aa3.44□□□□□ -1.86
PUB1YNL016W RSM10Q03201 203 aa3.44□□□□□ -1.86
PUB1YNL016W VPS60Q03390 229 aa3.44□□□□□ -1.86
PUB1YNL016W YMR166CQ03829 368 aa3.44□□□□□ -1.86
PUB1YNL016W MRPL51Q06090 140 aaPredicted RBP3.44□□□□□ -1.86
PUB1YNL016W RDL2Q08742 149 aaKnown RBP3.44□□□□□ -1.86
PUB1YNL016W TMS1Q12116 473 aa3.44□□□□□ -1.86
PUB1YNL016W EMP46Q12396 444 aa3.44□□□□□ -1.86
PUB1YNL016W LSO2Q3E772 92 aaKnown RBP3.44□□□□□ -1.86
PUB1YNL016W RPL16BP26785 198 aaKnown RBP3.43□□□□□ -1.86
PUB1YNL016W VPH2P32341 215 aa3.43□□□□□ -1.86
PUB1YNL016W QRI5P32344 111 aa3.43□□□□□ -1.86
PUB1YNL016W YKL075CP36083 450 aa3.43□□□□□ -1.86
PUB1YNL016W YPC1P38298 316 aa3.43□□□□□ -1.86
PUB1YNL016W SDS24P38314 527 aa3.43□□□□□ -1.86
PUB1YNL016W GWT1P47026 490 aa3.43□□□□□ -1.86
PUB1YNL016W YJR030CP47101 745 aa3.43□□□□□ -1.86
PUB1YNL016W MTM1P53320 366 aa3.43□□□□□ -1.86
PUB1YNL016W YNL095CP53932 642 aa3.43□□□□□ -1.86
PUB1YNL016W YNL040WP53960 456 aaPredicted RBP3.43□□□□□ -1.86
PUB1YNL016W SUR7P54003 302 aa3.43□□□□□ -1.86
PUB1YNL016W YLR460CP54007 376 aa3.43□□□□□ -1.86
PUB1YNL016W YDC1Q02896 317 aa3.43□□□□□ -1.86
PUB1YNL016W RNY1Q02933 434 aaKnown RBP3.43□□□□□ -1.86
PUB1YNL016W DIG1Q03063 452 aaKnown RBP3.43□□□□□ -1.86
PUB1YNL016W BCH1Q05029 724 aa3.43□□□□□ -1.86
PUB1YNL016W ARC18Q05933 178 aaKnown RBP3.43□□□□□ -1.86
PUB1YNL016W SFH1Q06168 426 aa3.43□□□□□ -1.86
PUB1YNL016W ATG10Q07879 167 aa3.43□□□□□ -1.86
PUB1YNL016W UTP23Q12339 254 aaKnown RBP3.43□□□□□ -1.86
PUB1YNL016W RPN6Q12377 434 aa3.43□□□□□ -1.86
PUB1YNL016W PEX11Q12462 236 aa3.43□□□□□ -1.86
PUB1YNL016W RPL28P02406 149 aaKnown RBP3.42□□□□□ -1.86
PUB1YNL016W REP1P03871 373 aa3.42□□□□□ -1.86
PUB1YNL016W SPT3P06844 337 aa3.42□□□□□ -1.86
PUB1YNL016W CDC10P25342 322 aaKnown RBP3.42□□□□□ -1.86
PUB1YNL016W RAD5P32849 1169 aaPredicted RBP3.42□□□□□ -1.86
PUB1YNL016W PDC2P32896 925 aa3.42□□□□□ -1.86
PUB1YNL016W CHK1P38147 527 aa3.42□□□□□ -1.86
PUB1YNL016W YBR096WP38256 230 aa3.42□□□□□ -1.86
PUB1YNL016W SHG1P38337 142 aa3.42□□□□□ -1.86
PUB1YNL016W CHS7P38843 316 aa3.42□□□□□ -1.86
PUB1YNL016W MET30P39014 640 aa3.42□□□□□ -1.86
PUB1YNL016W MST28P39552 234 aa3.42□□□□□ -1.86
PUB1YNL016W VPS52P39904 641 aa3.42□□□□□ -1.86
PUB1YNL016W RTS2P40962 232 aa3.42□□□□□ -1.86
PUB1YNL016W WWM1P43582 211 aaKnown RBP3.42□□□□□ -1.86
PUB1YNL016W IRC7P43623 340 aa3.42□□□□□ -1.86
PUB1YNL016W CIN2P46670 268 aa3.42□□□□□ -1.86
PUB1YNL016W CTK3P46963 296 aaPredicted RBP3.42□□□□□ -1.86
PUB1YNL016W MRM2P53123 320 aa3.42□□□□□ -1.86
PUB1YNL016W VHT1P53241 593 aa3.42□□□□□ -1.86
PUB1YNL016W GND2P53319 492 aa3.42□□□□□ -1.86
PUB1YNL016W HCH1P53834 153 aa3.42□□□□□ -1.86
PUB1YNL016W ASI3P53983 676 aa3.42□□□□□ -1.86
PUB1YNL016W CCE1Q03702 353 aa3.42□□□□□ -1.86
PUB1YNL016W ECI1Q05871 280 aa3.42□□□□□ -1.86
PUB1YNL016W YOR114WQ12219 294 aa3.42□□□□□ -1.86
PUB1YNL016W WTM1Q12363 437 aaKnown RBP3.42□□□□□ -1.86
PUB1YNL016W YPR064WQ12492 139 aa3.42□□□□□ -1.86
PUB1YNL016W IPP1P00817 287 aaKnown RBP3.41□□□□□ -1.86
PUB1YNL016W BCY1P07278 416 aaKnown RBP3.41□□□□□ -1.86
PUB1YNL016W CHA1P25379 360 aaKnown RBP3.41□□□□□ -1.86
PUB1YNL016W CPR3P25719 182 aa3.41□□□□□ -1.86
PUB1YNL016W CTS1P29029 562 aa3.41□□□□□ -1.86
PUB1YNL016W TRR1P29509 319 aaKnown RBP3.41□□□□□ -1.86
PUB1YNL016W SPT4P32914 102 aaPredicted RBP3.41□□□□□ -1.86
PUB1YNL016W YOX1P34161 385 aa3.41□□□□□ -1.86
PUB1YNL016W SRP102P36057 244 aaPredicted RBP3.41□□□□□ -1.86
PUB1YNL016W YBP1P38315 674 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 75.5 ms