RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W DRE2P36152 348 aa2.75□□□□□ -1.97
UBP8YMR223W BDH1P39714 382 aa2.75□□□□□ -1.97
UBP8YMR223W YER076CP40049 302 aa2.75□□□□□ -1.97
UBP8YMR223W PHB1P40961 287 aa2.75□□□□□ -1.97
UBP8YMR223W YGR201CP42936 225 aa2.75□□□□□ -1.97
UBP8YMR223W FMP32P43557 207 aa2.75□□□□□ -1.97
UBP8YMR223W ASG7P46993 209 aa2.75□□□□□ -1.97
UBP8YMR223W YJR054WP47114 497 aa2.75□□□□□ -1.97
UBP8YMR223W NUP57P48837 541 aa2.75□□□□□ -1.97
UBP8YMR223W MMS2P53152 137 aa2.75□□□□□ -1.97
UBP8YMR223W JAC1P53193 184 aa2.75□□□□□ -1.97
UBP8YMR223W PEX31P53203 462 aa2.75□□□□□ -1.97
UBP8YMR223W YPR127WQ06494 345 aa2.75□□□□□ -1.97
UBP8YMR223W TAZ1Q06510 381 aa2.75□□□□□ -1.97
UBP8YMR223W CTR3Q06686 241 aa2.75□□□□□ -1.97
UBP8YMR223W YET3Q07451 203 aa2.75□□□□□ -1.97
UBP8YMR223W YPD1Q07688 167 aa2.75□□□□□ -1.97
UBP8YMR223W FCY22Q12119 530 aa2.75□□□□□ -1.97
UBP8YMR223W YCT1Q12235 531 aa2.75□□□□□ -1.97
UBP8YMR223W RPN6Q12377 434 aa2.75□□□□□ -1.97
UBP8YMR223W ILV1P00927 576 aaKnown RBP2.74□□□□□ -1.97
UBP8YMR223W YOL163WP0CF20 169 aa2.74□□□□□ -1.97
UBP8YMR223W COS2P0CX12 379 aa2.74□□□□□ -1.97
UBP8YMR223W COS3P0CX13 379 aa2.74□□□□□ -1.97
UBP8YMR223W CAM1P29547 415 aaKnown RBP2.74□□□□□ -1.97
UBP8YMR223W JEN1P36035 616 aa2.74□□□□□ -1.97
UBP8YMR223W YCR087C-AP37263 153 aa2.74□□□□□ -1.97
UBP8YMR223W CUE1P38428 203 aa2.74□□□□□ -1.97
UBP8YMR223W TDA11P38854 504 aa2.74□□□□□ -1.97
UBP8YMR223W RBG1P39729 369 aa2.74□□□□□ -1.97
UBP8YMR223W PRE6P40303 254 aaKnown RBP2.74□□□□□ -1.97
UBP8YMR223W KEG1P43614 200 aa2.74□□□□□ -1.97
UBP8YMR223W YJR012CP47087 207 aa2.74□□□□□ -1.97
UBP8YMR223W OST3P48439 350 aa2.74□□□□□ -1.97
UBP8YMR223W TRM9P49957 279 aa2.74□□□□□ -1.97
UBP8YMR223W USE1P53146 245 aa2.74□□□□□ -1.97
UBP8YMR223W MST27P53176 234 aa2.74□□□□□ -1.97
UBP8YMR223W TPS1Q00764 495 aaKnown RBP2.74□□□□□ -1.97
UBP8YMR223W RMI1Q02685 241 aa2.74□□□□□ -1.97
UBP8YMR223W BET5Q03630 159 aa2.74□□□□□ -1.97
UBP8YMR223W ARO80Q04052 950 aa2.74□□□□□ -1.97
UBP8YMR223W NOC4Q06512 552 aaPredicted RBP2.74□□□□□ -1.97
UBP8YMR223W SRL2Q12020 392 aa2.74□□□□□ -1.97
UBP8YMR223W YOP1Q12402 180 aa2.74□□□□□ -1.97
UBP8YMR223W SWI1P09547 1314 aa2.74□□□□□ -1.97
UBP8YMR223W PPH21P23594 369 aa2.73□□□□□ -1.97
UBP8YMR223W VPH2P32341 215 aa2.73□□□□□ -1.97
UBP8YMR223W MUD1P32605 298 aaKnown RBP2.73□□□□□ -1.97
UBP8YMR223W COX13P32799 129 aa2.73□□□□□ -1.97
UBP8YMR223W SPT4P32914 102 aaPredicted RBP2.73□□□□□ -1.97
UBP8YMR223W UTP11P34247 250 aaPredicted RBP2.73□□□□□ -1.97
UBP8YMR223W CSG2P35206 410 aa2.73□□□□□ -1.97
UBP8YMR223W YBR056WP38081 501 aa2.73□□□□□ -1.97
UBP8YMR223W GPX2P38143 162 aa2.73□□□□□ -1.97
UBP8YMR223W SHE3P38272 425 aaKnown RBP2.73□□□□□ -1.97
UBP8YMR223W YHR035WP38769 630 aa2.73□□□□□ -1.97
UBP8YMR223W ALB1P47019 175 aaPredicted RBP2.73□□□□□ -1.97
UBP8YMR223W YJL016WP47072 561 aa2.73□□□□□ -1.97
UBP8YMR223W MOG1P47123 218 aa2.73□□□□□ -1.97
UBP8YMR223W ASI3P53983 676 aa2.73□□□□□ -1.97
UBP8YMR223W SPR6Q01684 191 aa2.73□□□□□ -1.97
UBP8YMR223W NUP49Q02199 472 aa2.73□□□□□ -1.97
UBP8YMR223W YMR315WQ04869 349 aaKnown RBP2.73□□□□□ -1.97
UBP8YMR223W SFH1Q06168 426 aa2.73□□□□□ -1.97
UBP8YMR223W IES4Q08561 116 aa2.73□□□□□ -1.97
UBP8YMR223W TAF10Q12030 206 aa2.73□□□□□ -1.97
UBP8YMR223W YDR018CQ12185 396 aa2.73□□□□□ -1.97
UBP8YMR223W RRP42Q12277 265 aaPredicted RBP2.73□□□□□ -1.97
UBP8YMR223W YLR361C-AQ3E795 98 aa2.73□□□□□ -1.97
UBP8YMR223W SPS100P13130 326 aa2.72□□□□□ -1.97
UBP8YMR223W SLY1P22213 666 aa2.72□□□□□ -1.97
UBP8YMR223W YCR023CP25351 611 aa2.72□□□□□ -1.97
UBP8YMR223W MCR1P36060 302 aaKnown RBP2.72□□□□□ -1.97
UBP8YMR223W YKL075CP36083 450 aa2.72□□□□□ -1.97
UBP8YMR223W ANR2P36090 516 aaPredicted RBP2.72□□□□□ -1.97
UBP8YMR223W YBR137WP38276 179 aa2.72□□□□□ -1.97
UBP8YMR223W YHK8P38776 514 aa2.72□□□□□ -1.97
UBP8YMR223W OXA1P39952 402 aa2.72□□□□□ -1.97
UBP8YMR223W MRM2P53123 320 aa2.72□□□□□ -1.97
UBP8YMR223W COS1P53822 381 aa2.72□□□□□ -1.97
UBP8YMR223W COG5P53951 403 aa2.72□□□□□ -1.97
UBP8YMR223W TMA20P89886 181 aaPredicted RBP2.72□□□□□ -1.97
UBP8YMR223W SNX41Q04053 625 aa2.72□□□□□ -1.97
UBP8YMR223W GAS2Q06135 555 aa2.72□□□□□ -1.97
UBP8YMR223W MRX9Q07349 420 aaKnown RBP2.72□□□□□ -1.97
UBP8YMR223W MFG1Q07684 458 aa2.72□□□□□ -1.97
UBP8YMR223W YOR289WQ12012 251 aaPredicted RBP2.72□□□□□ -1.97
UBP8YMR223W YOR283WQ12040 230 aaKnown RBP2.72□□□□□ -1.97
UBP8YMR223W NCA2Q12374 616 aa2.72□□□□□ -1.97
UBP8YMR223W AGC1Q12482 902 aa2.72□□□□□ -1.97
UBP8YMR223W IZH4Q99393 312 aa2.72□□□□□ -1.97
UBP8YMR223W RPO41P13433 1351 aaKnown RBP2.71□□□□□ -1.98
UBP8YMR223W TFS1P14306 219 aa2.71□□□□□ -1.98
UBP8YMR223W DBF2P22204 572 aa2.71□□□□□ -1.98
UBP8YMR223W TAH1P25638 111 aaPredicted RBP2.71□□□□□ -1.98
UBP8YMR223W CPR5P35176 225 aa2.71□□□□□ -1.98
UBP8YMR223W GEP4P38812 185 aa2.71□□□□□ -1.98
UBP8YMR223W YPT35P38815 214 aaKnown RBP2.71□□□□□ -1.98
UBP8YMR223W SEN34P39707 275 aa2.71□□□□□ -1.98
UBP8YMR223W UBC13P52490 153 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms