RNA–Protein interactions for RNA: YMR139W

RIM11, Transcript of Protein kinase, yeast

Gene RIM11, Length 1,113 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM11	YMR139W	NAM9	P27929	486 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	WBP1	P33767	430 aa	Known RBP	3.21	□□□□□ -1.9
RIM11	YMR139W	SDS24	P38314	527 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	VBA2	P38358	474 aa	Known RBP	3.21	□□□□□ -1.9
RIM11	YMR139W	ELO1	P39540	310 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	VPS52	P39904	641 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	YER184C	P39961	794 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	YMR144W	P40214	342 aa	Known RBP	3.21	□□□□□ -1.9
RIM11	YMR139W	ALK1	P43633	760 aa	Known RBP	3.21	□□□□□ -1.9
RIM11	YMR139W	ALB1	P47019	175 aa	Predicted RBP	3.21	□□□□□ -1.9
RIM11	YMR139W	UBX6	P47049	396 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	LOH1	P47055	219 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	YJR096W	P47137	282 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	LYS20	P48570	428 aa	Known RBP	3.21	□□□□□ -1.9
RIM11	YMR139W	YGL204C	P53089	101 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	YGL117W	P53133	265 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	OGG1	P53397	376 aa	Predicted RBP	3.21	□□□□□ -1.9
RIM11	YMR139W	CWC25	P53854	179 aa	Known RBP	3.21	□□□□□ -1.9
RIM11	YMR139W	SWS2	P53937	143 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	HXT11	P54862	567 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	KAP120	Q02932	1032 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	DCR2	Q05924	578 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	YFT2	Q06676	274 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	LUC7	Q07508	261 aa	Predicted RBP	3.21	□□□□□ -1.9
RIM11	YMR139W	SYC1	Q08553	188 aa	Predicted RBP	3.21	□□□□□ -1.9
RIM11	YMR139W	RTC5	Q12108	567 aa	Known RBP	3.21	□□□□□ -1.9
RIM11	YMR139W	LYS21	Q12122	440 aa	Known RBP	3.21	□□□□□ -1.9
RIM11	YMR139W	YDR262W	Q12331	272 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	FSH3	Q99369	266 aa		3.21	□□□□□ -1.9
RIM11	YMR139W	YBR085C-A	O43137	85 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	AAC1	P04710	309 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	RPL20A	P0CX23	172 aa	Known RBP	3.2	□□□□□ -1.9
RIM11	YMR139W	RPL20B	P0CX24	172 aa	Predicted RBP	3.2	□□□□□ -1.9
RIM11	YMR139W	RPL3	P14126	387 aa	Known RBP	3.2	□□□□□ -1.9
RIM11	YMR139W	MAG1	P22134	296 aa	Known RBP	3.2	□□□□□ -1.9
RIM11	YMR139W	GPI12	P23797	304 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	MXR2	P25566	168 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	MRP17	P28778	131 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	CAM1	P29547	415 aa	Known RBP	3.2	□□□□□ -1.9
RIM11	YMR139W	TRS65	P32893	560 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	GPX1	P36014	167 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	SRX1	P36077	127 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	SMB1	P40018	196 aa	Known RBP	3.2	□□□□□ -1.9
RIM11	YMR139W	SWM2	P40342	146 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	UTP25	P40498	721 aa	Known RBP	3.2	□□□□□ -1.9
RIM11	YMR139W	NAS2	P40555	220 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	SNO3	P43544	222 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	CIS3	P47001	227 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	LSM1	P47017	172 aa	Known RBP	3.2	□□□□□ -1.9
RIM11	YMR139W	HAM1	P47119	197 aa	Known RBP	3.2	□□□□□ -1.9
RIM11	YMR139W	CCC1	P47818	322 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	YGR042W	P53227	271 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	FMP48	P53233	369 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	MPP6	P53725	186 aa	Predicted RBP	3.2	□□□□□ -1.9
RIM11	YMR139W	NCE101	Q02820	53 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	YLR352W	Q06479	807 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	YPR174C	Q06616	221 aa	Predicted RBP	3.2	□□□□□ -1.9
RIM11	YMR139W	THI73	Q07904	523 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	HRT1	Q08273	121 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	RDR1	Q08904	546 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	FEX2	Q08991	375 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	AEP3	Q12089	606 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	YDL109C	Q12103	647 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	YOS9	Q99220	542 aa		3.2	□□□□□ -1.9
RIM11	YMR139W	PHO2	P07269	559 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	CHO1	P08456	276 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	PRB1	P09232	635 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	PUT1	P09368	476 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	FUS3	P16892	353 aa	Known RBP	3.19	□□□□□ -1.9
RIM11	YMR139W	YCR061W	P25639	631 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	CPR3	P25719	182 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	DBF20	P32328	564 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	MSN4	P33749	630 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
RIM11	YMR139W	RPS27A	P35997	82 aa	Known RBP	3.19	□□□□□ -1.9
RIM11	YMR139W	ELF1	P36053	145 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	RPS27B	P38711	82 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	NSG1	P38837	291 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	YIL077C	P40508	320 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	INN1	P53901	409 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
RIM11	YMR139W	MRPL1	Q04599	285 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	MRX8	Q05473	314 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	STP3	Q05937	343 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	MRPL51	Q06090	140 aa	Predicted RBP	3.19	□□□□□ -1.9
RIM11	YMR139W	YLR031W	Q07978	186 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	COQ10	Q08058	207 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	YOR385W	Q08909	290 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	RLM1	Q12224	676 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	ORT1	Q12375	292 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	SKM1	Q12469	655 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	SET6	Q12529	373 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	YDR034W-B	Q6Q5X2	51 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	YHR213W-A	Q8TGT4	77 aa		3.19	□□□□□ -1.9
RIM11	YMR139W	MEX67	Q99257	599 aa	Known RBP	3.19	□□□□□ -1.9
RIM11	YMR139W	TDH2	P00358	332 aa	Known RBP	3.18	□□□□□ -1.9
RIM11	YMR139W	YSF3	P0C074	85 aa	Predicted RBP	3.18	□□□□□ -1.9
RIM11	YMR139W	HOM3	P10869	527 aa		3.18	□□□□□ -1.9
RIM11	YMR139W	RPB8	P20436	146 aa		3.18	□□□□□ -1.9
RIM11	YMR139W	CPR2	P23285	205 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms