RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C SWD3P38123 315 aa2.39□□□□□ -2.03
YMR050CYMR050C YBL029WP38201 376 aa2.39□□□□□ -2.03
YMR050CYMR050C SVP26P38869 228 aa2.39□□□□□ -2.03
YMR050CYMR050C GPP2P40106 250 aaKnown RBP2.39□□□□□ -2.03
YMR050CYMR050C YGR149WP48236 432 aa2.39□□□□□ -2.03
YMR050CYMR050C BUL1P48524 976 aa2.39□□□□□ -2.03
YMR050CYMR050C NUP57P48837 541 aa2.39□□□□□ -2.03
YMR050CYMR050C TOS8P53147 276 aa2.39□□□□□ -2.03
YMR050CYMR050C YLR152CP54072 576 aa2.39□□□□□ -2.03
YMR050CYMR050C PIR3Q03180 325 aa2.39□□□□□ -2.03
YMR050CYMR050C YML079WQ03629 201 aa2.39□□□□□ -2.03
YMR050CYMR050C ERF2Q06551 359 aa2.39□□□□□ -2.03
YMR050CYMR050C SNX3Q08826 162 aaKnown RBP2.39□□□□□ -2.03
YMR050CYMR050C ACM1Q08981 209 aa2.39□□□□□ -2.03
YMR050CYMR050C DCS2Q12123 353 aa2.39□□□□□ -2.03
YMR050CYMR050C TFC7Q12415 435 aa2.39□□□□□ -2.03
YMR050CYMR050C RDI1Q12434 202 aa2.39□□□□□ -2.03
YMR050CYMR050C ERD2P18414 219 aa2.38□□□□□ -2.03
YMR050CYMR050C FTH1P38310 465 aa2.38□□□□□ -2.03
YMR050CYMR050C SSH1P38353 490 aaKnown RBP2.38□□□□□ -2.03
YMR050CYMR050C PSD1P39006 500 aa2.38□□□□□ -2.03
YMR050CYMR050C SIT1P39980 628 aa2.38□□□□□ -2.03
YMR050CYMR050C VHR1P40522 640 aa2.38□□□□□ -2.03
YMR050CYMR050C HIS6P40545 261 aa2.38□□□□□ -2.03
YMR050CYMR050C STE24P47154 453 aa2.38□□□□□ -2.03
YMR050CYMR050C DIA1P54005 336 aa2.38□□□□□ -2.03
YMR050CYMR050C COA4Q05809 96 aa2.38□□□□□ -2.03
YMR050CYMR050C CTS2Q06350 511 aa2.38□□□□□ -2.03
YMR050CYMR050C MRX9Q07349 420 aaKnown RBP2.38□□□□□ -2.03
YMR050CYMR050C FRE8Q12209 686 aa2.38□□□□□ -2.03
YMR050CYMR050C RNH203Q12338 110 aa2.38□□□□□ -2.03
YMR050CYMR050C COX1P00401 534 aa2.38□□□□□ -2.03
YMR050CYMR050C RPL9AP05738 191 aaKnown RBP2.38□□□□□ -2.03
YMR050CYMR050C CNE1P27825 502 aa2.38□□□□□ -2.03
YMR050CYMR050C UGX2P32772 223 aa2.38□□□□□ -2.03
YMR050CYMR050C MGM101P32787 269 aaKnown RBP2.38□□□□□ -2.03
YMR050CYMR050C TIF3P34167 436 aaKnown RBP2.38□□□□□ -2.03
YMR050CYMR050C SET3P36124 751 aa2.38□□□□□ -2.03
YMR050CYMR050C SIM1P40472 476 aa2.38□□□□□ -2.03
YMR050CYMR050C XPT1P47165 209 aa2.38□□□□□ -2.03
YMR050CYMR050C HST3P53687 447 aa2.38□□□□□ -2.03
YMR050CYMR050C RHO5P53879 331 aaKnown RBP2.38□□□□□ -2.03
YMR050CYMR050C CWC27Q02770 301 aa2.38□□□□□ -2.03
YMR050CYMR050C RSM28Q03430 361 aa2.38□□□□□ -2.03
YMR050CYMR050C PPT2Q12036 173 aa2.38□□□□□ -2.03
YMR050CYMR050C SAC1P32368 623 aaKnown RBP2.38□□□□□ -2.03
YMR050CYMR050C YKL063CP35725 167 aa2.38□□□□□ -2.03
YMR050CYMR050C PUG1P40100 303 aa2.38□□□□□ -2.03
YMR050CYMR050C AGX1P43567 385 aa2.38□□□□□ -2.03
YMR050CYMR050C HAM1P47119 197 aaKnown RBP2.38□□□□□ -2.03
YMR050CYMR050C YPL077CQ02831 240 aa2.38□□□□□ -2.03
YMR050CYMR050C TVP15Q03860 143 aa2.38□□□□□ -2.03
YMR050CYMR050C PKR1Q03880 122 aaKnown RBP2.38□□□□□ -2.03
YMR050CYMR050C ATC1Q04005 294 aa2.38□□□□□ -2.03
YMR050CYMR050C THI72Q08579 599 aa2.38□□□□□ -2.03
YMR050CYMR050C ALG6Q12001 544 aaKnown RBP2.38□□□□□ -2.03
YMR050CYMR050C TIR4Q12218 487 aaPredicted RBP2.38□□□□□ -2.03
YMR050CYMR050C SNF8Q12483 233 aa2.38□□□□□ -2.03
YMR050CYMR050C RRP7P25368 297 aaPredicted RBP2.38□□□□□ -2.03
YMR050CYMR050C EHD3P28817 500 aa2.38□□□□□ -2.03
YMR050CYMR050C PTR2P32901 601 aa2.38□□□□□ -2.03
YMR050CYMR050C DAD2P36162 133 aa2.38□□□□□ -2.03
YMR050CYMR050C HEK2P38199 381 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
YMR050CYMR050C RRP4P38792 359 aaKnown RBP2.38□□□□□ -2.03
YMR050CYMR050C SMB1P40018 196 aaKnown RBP2.38□□□□□ -2.03
YMR050CYMR050C SDS23P53172 527 aa2.38□□□□□ -2.03
YMR050CYMR050C PMP3P87284 55 aa2.38□□□□□ -2.03
YMR050CYMR050C DST1P07273 309 aa2.37□□□□□ -2.03
YMR050CYMR050C IMA3P0CW40 589 aa2.37□□□□□ -2.03
YMR050CYMR050C IMA4P0CW41 589 aa2.37□□□□□ -2.03
YMR050CYMR050C FUS3P16892 353 aaKnown RBP2.37□□□□□ -2.03
YMR050CYMR050C SPO11P23179 398 aa2.37□□□□□ -2.03
YMR050CYMR050C SCO1P23833 295 aa2.37□□□□□ -2.03
YMR050CYMR050C RNP1P32385 249 aa2.37□□□□□ -2.03
YMR050CYMR050C MRPS5P33759 307 aa2.37□□□□□ -2.03
YMR050CYMR050C SHE1P38200 338 aa2.37□□□□□ -2.03
YMR050CYMR050C OM14P38325 134 aa2.37□□□□□ -2.03
YMR050CYMR050C SET5P38890 526 aaKnown RBP2.37□□□□□ -2.03
YMR050CYMR050C SEC72P39742 193 aaKnown RBP2.37□□□□□ -2.03
YMR050CYMR050C NSA2P40078 261 aaKnown RBP2.37□□□□□ -2.03
YMR050CYMR050C AMA1P50082 593 aa2.37□□□□□ -2.03
YMR050CYMR050C MGA1P53050 456 aa2.37□□□□□ -2.03
YMR050CYMR050C VPS28Q02767 242 aa2.37□□□□□ -2.03
YMR050CYMR050C ROT1Q03691 256 aa2.37□□□□□ -2.03
YMR050CYMR050C YMR155WQ03795 547 aa2.37□□□□□ -2.03
YMR050CYMR050C VBA1Q04301 562 aa2.37□□□□□ -2.03
YMR050CYMR050C DTD1Q07648 150 aaKnown RBP2.37□□□□□ -2.03
YMR050CYMR050C IZH3Q07959 543 aa2.37□□□□□ -2.03
YMR050CYMR050C IMA2Q08295 589 aa2.37□□□□□ -2.03
YMR050CYMR050C CSM4Q08955 156 aa2.37□□□□□ -2.03
YMR050CYMR050C PAA1Q12447 191 aaKnown RBP2.37□□□□□ -2.03
YMR050CYMR050C RAX2Q12465 1220 aa2.37□□□□□ -2.03
YMR050CYMR050C SUS1Q6WNK7 96 aa2.37□□□□□ -2.03
YMR050CYMR050C MIR1P23641 311 aaKnown RBP2.37□□□□□ -2.03
YMR050CYMR050C PHD1P36093 366 aa2.37□□□□□ -2.03
YMR050CYMR050C TRM5P38793 499 aa2.37□□□□□ -2.03
YMR050CYMR050C HXT14P42833 540 aa2.37□□□□□ -2.03
YMR050CYMR050C SUT1P53032 299 aaKnown RBP2.37□□□□□ -2.03
YMR050CYMR050C ARO8P53090 500 aaKnown RBP2.37□□□□□ -2.03
YMR050CYMR050C NCE103P53615 221 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms