RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeastyeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR3YLR442C TY1B-GR2Q12269 1755 aa2.23□□□□□ -2.05
SIR3YLR442C TY1B-OLQ12273 1755 aa2.23□□□□□ -2.05
SIR3YLR442C TY1B-PLQ12414 1755 aaKnown RBP2.23□□□□□ -2.05
SIR3YLR442C GDH1P07262 454 aaKnown RBP2.23□□□□□ -2.05
SIR3YLR442C LSB5P25369 354 aa2.23□□□□□ -2.05
SIR3YLR442C POP5P28005 173 aa2.23□□□□□ -2.05
SIR3YLR442C NRP1P32770 719 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
SIR3YLR442C PHD1P36093 366 aa2.23□□□□□ -2.05
SIR3YLR442C UTP30P36144 274 aaKnown RBP2.23□□□□□ -2.05
SIR3YLR442C ROT2P38138 954 aa2.23□□□□□ -2.05
SIR3YLR442C VHC1P38329 1120 aa2.23□□□□□ -2.05
SIR3YLR442C ARO9P38840 513 aaPredicted RBP2.23□□□□□ -2.05
SIR3YLR442C ATG7P38862 630 aa2.23□□□□□ -2.05
SIR3YLR442C YIL012WP40551 113 aa2.23□□□□□ -2.05
SIR3YLR442C YIA6P40556 373 aa2.23□□□□□ -2.05
SIR3YLR442C BUD8P41698 603 aa2.23□□□□□ -2.05
SIR3YLR442C CPR7P47103 393 aa2.23□□□□□ -2.05
SIR3YLR442C PYK2P52489 506 aaKnown RBP2.23□□□□□ -2.05
SIR3YLR442C YGL101WP53144 215 aa2.23□□□□□ -2.05
SIR3YLR442C AIM11P87275 137 aa2.23□□□□□ -2.05
SIR3YLR442C ELC1Q03071 99 aa2.23□□□□□ -2.05
SIR3YLR442C YPR114WQ06107 315 aa2.23□□□□□ -2.05
SIR3YLR442C FRE8Q12209 686 aa2.23□□□□□ -2.05
SIR3YLR442C TY1B-GR3Q12316 1755 aa2.23□□□□□ -2.05
SIR3YLR442C TY1B-ORQ92393 1755 aa2.23□□□□□ -2.05
SIR3YLR442C RPN13O13563 156 aa2.23□□□□□ -2.05
SIR3YLR442C ADH2P00331 348 aaKnown RBP2.23□□□□□ -2.05
SIR3YLR442C MF(ALPHA)1P01149 165 aa2.23□□□□□ -2.05
SIR3YLR442C URE2P23202 354 aaKnown RBP2.23□□□□□ -2.05
SIR3YLR442C PEX34P25584 144 aa2.23□□□□□ -2.05
SIR3YLR442C APE2P32454 952 aaKnown RBP2.23□□□□□ -2.05
SIR3YLR442C YKL162CP36052 402 aa2.23□□□□□ -2.05
SIR3YLR442C SHE2P36068 246 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
SIR3YLR442C SWD2P36104 329 aaPredicted RBP2.23□□□□□ -2.05
SIR3YLR442C YKR051WP36142 418 aa2.23□□□□□ -2.05
SIR3YLR442C DBP8P38719 431 aa2.23□□□□□ -2.05
SIR3YLR442C GOS1P38736 223 aa2.23□□□□□ -2.05
SIR3YLR442C DOG1P38774 246 aa2.23□□□□□ -2.05
SIR3YLR442C IPI1P38803 334 aaPredicted RBP2.23□□□□□ -2.05
SIR3YLR442C VFA1P40080 203 aa2.23□□□□□ -2.05
SIR3YLR442C CDC40P40968 455 aaPredicted RBP2.23□□□□□ -2.05
SIR3YLR442C GSM1P42950 618 aa2.23□□□□□ -2.05
SIR3YLR442C YJR015WP47090 510 aa2.23□□□□□ -2.05
SIR3YLR442C MIC26P50087 233 aa2.23□□□□□ -2.05
SIR3YLR442C ARO8P53090 500 aaKnown RBP2.23□□□□□ -2.05
SIR3YLR442C MPA43P53583 542 aaPredicted RBP2.23□□□□□ -2.05
SIR3YLR442C YNL010WP53981 241 aaKnown RBP2.23□□□□□ -2.05
SIR3YLR442C TRM44Q02648 567 aaKnown RBP2.23□□□□□ -2.05
SIR3YLR442C HNT1Q04344 158 aaKnown RBP2.23□□□□□ -2.05
SIR3YLR442C SEI1Q06058 285 aa2.23□□□□□ -2.05
SIR3YLR442C CTR3Q06686 241 aa2.23□□□□□ -2.05
SIR3YLR442C AIM6Q07716 390 aa2.23□□□□□ -2.05
SIR3YLR442C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
SIR3YLR442C LDS2Q08218 356 aa2.23□□□□□ -2.05
SIR3YLR442C GTT2Q12390 233 aa2.23□□□□□ -2.05
SIR3YLR442C KTI11Q3E840 82 aa2.23□□□□□ -2.05
SIR3YLR442C TPK3P05986 398 aa2.22□□□□□ -2.05
SIR3YLR442C YML003WP0CF16 290 aa2.22□□□□□ -2.05
SIR3YLR442C TAH1P25638 111 aaPredicted RBP2.22□□□□□ -2.05
SIR3YLR442C PTM1P32857 523 aa2.22□□□□□ -2.05
SIR3YLR442C SNC2P33328 115 aa2.22□□□□□ -2.05
SIR3YLR442C SRY1P36007 326 aa2.22□□□□□ -2.05
SIR3YLR442C VBA2P38358 474 aaKnown RBP2.22□□□□□ -2.05
SIR3YLR442C RPS20P38701 121 aaKnown RBP2.22□□□□□ -2.05
SIR3YLR442C RRP4P38792 359 aaKnown RBP2.22□□□□□ -2.05
SIR3YLR442C GNA1P43577 159 aaPredicted RBP2.22□□□□□ -2.05
SIR3YLR442C FAR3P46671 204 aa2.22□□□□□ -2.05
SIR3YLR442C YJL043WP47053 257 aa2.22□□□□□ -2.05
SIR3YLR442C TAD2P47058 250 aa2.22□□□□□ -2.05
SIR3YLR442C ROG1P53118 685 aa2.22□□□□□ -2.05
SIR3YLR442C FLC3P53121 802 aa2.22□□□□□ -2.05
SIR3YLR442C PUS2P53167 370 aa2.22□□□□□ -2.05
SIR3YLR442C JAC1P53193 184 aa2.22□□□□□ -2.05
SIR3YLR442C CSL4P53859 292 aaPredicted RBP2.22□□□□□ -2.05
SIR3YLR442C ACT1P60010 375 aaKnown RBP2.22□□□□□ -2.05
SIR3YLR442C ODC1Q03028 310 aa2.22□□□□□ -2.05
SIR3YLR442C NRG1Q03125 231 aa2.22□□□□□ -2.05
SIR3YLR442C HNT3Q08702 217 aa2.22□□□□□ -2.05
SIR3YLR442C FCY1Q12178 158 aa2.22□□□□□ -2.05
SIR3YLR442C YOR342CQ12182 319 aa2.22□□□□□ -2.05
SIR3YLR442C YCL012CQ8J0M4 134 aa2.22□□□□□ -2.05
SIR3YLR442C TY1B-NL2Q99337 1749 aaKnown RBP2.22□□□□□ -2.05
SIR3YLR442C FAS2P19097 1887 aaKnown RBP2.22□□□□□ -2.05
SIR3YLR442C ILV1P00927 576 aaKnown RBP2.22□□□□□ -2.05
SIR3YLR442C ATP5P09457 212 aa2.22□□□□□ -2.05
SIR3YLR442C PCL1P24867 279 aa2.22□□□□□ -2.05
SIR3YLR442C ARO2P28777 376 aaKnown RBP2.22□□□□□ -2.05
SIR3YLR442C MRPL9P31334 269 aa2.22□□□□□ -2.05
SIR3YLR442C ARO7P32178 256 aa2.22□□□□□ -2.05
SIR3YLR442C ACH1P32316 526 aa2.22□□□□□ -2.05
SIR3YLR442C NUP2P32499 720 aa2.22□□□□□ -2.05
SIR3YLR442C CBP4P37267 147 aa2.22□□□□□ -2.05
SIR3YLR442C POP8P38208 133 aa2.22□□□□□ -2.05
SIR3YLR442C TRM7P38238 310 aaKnown RBP2.22□□□□□ -2.05
SIR3YLR442C COA1P40452 197 aa2.22□□□□□ -2.05
SIR3YLR442C VHS2P40463 436 aa2.22□□□□□ -2.05
SIR3YLR442C SGN1P40561 250 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
SIR3YLR442C YPS6P40583 537 aa2.22□□□□□ -2.05
SIR3YLR442C CTK2P46962 323 aa2.22□□□□□ -2.05
SIR3YLR442C HOC1P47124 396 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms