RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W YJR111CP47148 283 aaKnown RBP3.29□□□□□ -1.88
NUP85YJR042W OST3P48439 350 aa3.29□□□□□ -1.88
NUP85YJR042W YNR048WP53740 393 aa3.29□□□□□ -1.88
NUP85YJR042W NRK1P53915 240 aa3.29□□□□□ -1.88
NUP85YJR042W YPR202WQ08993 238 aa3.29□□□□□ -1.88
NUP85YJR042W YCT1Q12235 531 aa3.29□□□□□ -1.88
NUP85YJR042W SME1Q12330 94 aaPredicted RBP3.29□□□□□ -1.88
NUP85YJR042W HRT3Q12347 344 aa3.29□□□□□ -1.88
NUP85YJR042W JLP1Q12358 412 aa3.29□□□□□ -1.88
NUP85YJR042W REP1P03871 373 aa3.29□□□□□ -1.88
NUP85YJR042W ALG7P07286 448 aa3.29□□□□□ -1.88
NUP85YJR042W RPB8P20436 146 aa3.29□□□□□ -1.88
NUP85YJR042W EXG1P23776 448 aaKnown RBP3.29□□□□□ -1.88
NUP85YJR042W MDH3P32419 343 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
NUP85YJR042W YEF1P32622 495 aa3.29□□□□□ -1.88
NUP85YJR042W YBR137WP38276 179 aa3.29□□□□□ -1.88
NUP85YJR042W TRM5P38793 499 aa3.29□□□□□ -1.88
NUP85YJR042W CIN2P46670 268 aa3.29□□□□□ -1.88
NUP85YJR042W PMT4P46971 762 aa3.29□□□□□ -1.88
NUP85YJR042W MDV1P47025 714 aa3.29□□□□□ -1.88
NUP85YJR042W YGL235WP53071 178 aa3.29□□□□□ -1.88
NUP85YJR042W TPN1P53099 579 aa3.29□□□□□ -1.88
NUP85YJR042W ERG13P54839 491 aaKnown RBP3.29□□□□□ -1.88
NUP85YJR042W ARO80Q04052 950 aa3.29□□□□□ -1.88
NUP85YJR042W YMR315WQ04869 349 aaKnown RBP3.29□□□□□ -1.88
NUP85YJR042W MMT2Q08970 484 aa3.29□□□□□ -1.88
NUP85YJR042W UTP23Q12339 254 aaKnown RBP3.29□□□□□ -1.88
NUP85YJR042W EMP46Q12396 444 aa3.29□□□□□ -1.88
NUP85YJR042W YOL163WP0CF20 169 aa3.28□□□□□ -1.88
NUP85YJR042W CAP2P13517 287 aa3.28□□□□□ -1.88
NUP85YJR042W TFS1P14306 219 aa3.28□□□□□ -1.88
NUP85YJR042W CUP2P15315 225 aa3.28□□□□□ -1.88
NUP85YJR042W NAM9P27929 486 aa3.28□□□□□ -1.88
NUP85YJR042W URA10P30402 227 aa3.28□□□□□ -1.88
NUP85YJR042W MNS1P32906 549 aa3.28□□□□□ -1.88
NUP85YJR042W THI80P35202 319 aa3.28□□□□□ -1.88
NUP85YJR042W RBG1P39729 369 aa3.28□□□□□ -1.88
NUP85YJR042W MAM33P40513 266 aa3.28□□□□□ -1.88
NUP85YJR042W PRM10P42946 383 aa3.28□□□□□ -1.88
NUP85YJR042W GAT1P43574 510 aa3.28□□□□□ -1.88
NUP85YJR042W RRT5P43607 289 aa3.28□□□□□ -1.88
NUP85YJR042W IKS1P47042 667 aa3.28□□□□□ -1.88
NUP85YJR042W TRM9P49957 279 aa3.28□□□□□ -1.88
NUP85YJR042W YGR035CP53222 116 aa3.28□□□□□ -1.88
NUP85YJR042W TPS1Q00764 495 aaKnown RBP3.28□□□□□ -1.88
NUP85YJR042W YDR476CQ03362 224 aa3.28□□□□□ -1.88
NUP85YJR042W PER33Q12144 273 aa3.28□□□□□ -1.88
NUP85YJR042W YOR114WQ12219 294 aa3.28□□□□□ -1.88
NUP85YJR042W YGK3Q12222 375 aaPredicted RBP3.28□□□□□ -1.88
NUP85YJR042W RPL20AP0CX23 172 aaKnown RBP3.28□□□□□ -1.88
NUP85YJR042W RPL20BP0CX24 172 aaPredicted RBP3.28□□□□□ -1.88
NUP85YJR042W HRR25P29295 494 aaKnown RBP3.28□□□□□ -1.88
NUP85YJR042W TRR1P29509 319 aaKnown RBP3.28□□□□□ -1.88
NUP85YJR042W PHA2P32452 334 aa3.28□□□□□ -1.88
NUP85YJR042W JEN1P36035 616 aa3.28□□□□□ -1.88
NUP85YJR042W KAE1P36132 386 aa3.28□□□□□ -1.88
NUP85YJR042W ARN1P38731 627 aa3.28□□□□□ -1.88
NUP85YJR042W YPT35P38815 214 aaKnown RBP3.28□□□□□ -1.88
NUP85YJR042W YER137CP40083 148 aaKnown RBP3.28□□□□□ -1.88
NUP85YJR042W PDS1P40316 373 aaPredicted RBP3.28□□□□□ -1.88
NUP85YJR042W TES1P41903 349 aaKnown RBP3.28□□□□□ -1.88
NUP85YJR042W YJR054WP47114 497 aa3.28□□□□□ -1.88
NUP85YJR042W YLR152CP54072 576 aa3.28□□□□□ -1.88
NUP85YJR042W STP1Q00947 519 aa3.28□□□□□ -1.88
NUP85YJR042W MZM1Q03429 123 aaPredicted RBP3.28□□□□□ -1.88
NUP85YJR042W SNX41Q04053 625 aa3.28□□□□□ -1.88
NUP85YJR042W COQ10Q08058 207 aa3.28□□□□□ -1.88
NUP85YJR042W THI20Q08224 551 aa3.28□□□□□ -1.88
NUP85YJR042W PFA4Q12006 378 aa3.28□□□□□ -1.88
NUP85YJR042W NSL1Q12143 216 aa3.28□□□□□ -1.88
NUP85YJR042W YLR111WQ12528 110 aa3.28□□□□□ -1.88
NUP85YJR042W RPS13P05756 151 aaKnown RBP3.27□□□□□ -1.89
NUP85YJR042W MET2P08465 486 aa3.27□□□□□ -1.89
NUP85YJR042W ATR1P13090 542 aa3.27□□□□□ -1.89
NUP85YJR042W COX13P32799 129 aa3.27□□□□□ -1.89
NUP85YJR042W SPT4P32914 102 aaPredicted RBP3.27□□□□□ -1.89
NUP85YJR042W TIR2P33890 251 aa3.27□□□□□ -1.89
NUP85YJR042W SPC34P36131 295 aa3.27□□□□□ -1.89
NUP85YJR042W PHO89P38361 574 aa3.27□□□□□ -1.89
NUP85YJR042W GRE3P38715 327 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
NUP85YJR042W YHK8P38776 514 aa3.27□□□□□ -1.89
NUP85YJR042W AIM18P38884 321 aa3.27□□□□□ -1.89
NUP85YJR042W SEO1P39709 593 aa3.27□□□□□ -1.89
NUP85YJR042W PAC2P39937 518 aa3.27□□□□□ -1.89
NUP85YJR042W COX15P40086 486 aa3.27□□□□□ -1.89
NUP85YJR042W TMA20P89886 181 aaPredicted RBP3.27□□□□□ -1.89
NUP85YJR042W SPR6Q01684 191 aa3.27□□□□□ -1.89
NUP85YJR042W YMR321CQ04898 105 aa3.27□□□□□ -1.89
NUP85YJR042W MHR1Q06630 226 aa3.27□□□□□ -1.89
NUP85YJR042W BSC1Q12140 328 aa3.27□□□□□ -1.89
NUP85YJR042W SPT3P06844 337 aa3.27□□□□□ -1.89
NUP85YJR042W SPS100P13130 326 aa3.27□□□□□ -1.89
NUP85YJR042W DPM1P14020 267 aaKnown RBP3.27□□□□□ -1.89
NUP85YJR042W YCR022CP25620 114 aa3.27□□□□□ -1.89
NUP85YJR042W SNC1P31109 117 aa3.27□□□□□ -1.89
NUP85YJR042W YBR056WP38081 501 aa3.27□□□□□ -1.89
NUP85YJR042W PET8P38921 284 aa3.27□□□□□ -1.89
NUP85YJR042W COS4P43542 379 aa3.27□□□□□ -1.89
NUP85YJR042W FMP32P43557 207 aa3.27□□□□□ -1.89
NUP85YJR042W NUP57P48837 541 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms