RNA–Protein interactions for RNA: YHR050W

SMF2, Transcript of Divalent metal ion transporter involved in manganese homeostasis, yeastyeast

Gene SMF2, Length 1,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMF2YHR050W SUA5P32579 426 aa5.1□□□□□ -1.59
SMF2YHR050W PAD1P33751 242 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
SMF2YHR050W SDS24P38314 527 aa5.1□□□□□ -1.59
SMF2YHR050W SMB1P40018 196 aaKnown RBP5.1□□□□□ -1.59
SMF2YHR050W YIL067CP40514 678 aa5.1□□□□□ -1.59
SMF2YHR050W CFD1P40558 293 aa5.1□□□□□ -1.59
SMF2YHR050W SHR5P41912 237 aa5.1□□□□□ -1.59
SMF2YHR050W SLS1P42900 643 aa5.1□□□□□ -1.59
SMF2YHR050W MRX5P47007 382 aa5.1□□□□□ -1.59
SMF2YHR050W MPA43P53583 542 aaPredicted RBP5.1□□□□□ -1.59
SMF2YHR050W CUZ1P53899 274 aa5.1□□□□□ -1.59
SMF2YHR050W GRC3Q07845 632 aa5.1□□□□□ -1.59
SMF2YHR050W ZEO1Q08245 113 aa5.1□□□□□ -1.59
SMF2YHR050W REX3Q12090 404 aa5.1□□□□□ -1.59
SMF2YHR050W RLM1Q12224 676 aa5.1□□□□□ -1.59
SMF2YHR050W FAS1P07149 2051 aaKnown RBP5.09□□□□□ -1.59
SMF2YHR050W GAL1P04385 528 aa5.09□□□□□ -1.59
SMF2YHR050W GCD1P09032 578 aaPredicted RBP5.09□□□□□ -1.59
SMF2YHR050W TY1A-LR4P0C2I8 440 aaKnown RBP5.09□□□□□ -1.59
SMF2YHR050W RPL1AP0CX43 217 aaKnown RBP5.09□□□□□ -1.59
SMF2YHR050W RPL1BP0CX44 217 aaKnown RBP5.09□□□□□ -1.59
SMF2YHR050W TY1A-DR6P0CX70 440 aa5.09□□□□□ -1.59
SMF2YHR050W TY1A-ER1P0CX71 440 aa5.09□□□□□ -1.59
SMF2YHR050W TY1A-LR2P0CX72 440 aa5.09□□□□□ -1.59
SMF2YHR050W TY1A-PLP0CX73 440 aa5.09□□□□□ -1.59
SMF2YHR050W TY1A-JR1P0CX74 440 aa5.09□□□□□ -1.59
SMF2YHR050W TY1A-LR3P0CX75 440 aa5.09□□□□□ -1.59
SMF2YHR050W TY1A-ML2P0CX76 440 aa5.09□□□□□ -1.59
SMF2YHR050W SNF5P18480 905 aa5.09□□□□□ -1.59
SMF2YHR050W STP22P25604 385 aa5.09□□□□□ -1.59
SMF2YHR050W MCM10P32354 571 aa5.09□□□□□ -1.59
SMF2YHR050W FLO10P36170 1169 aa5.09□□□□□ -1.59
SMF2YHR050W YHR180WP38868 163 aa5.09□□□□□ -1.59
SMF2YHR050W YJL193WP39542 402 aa5.09□□□□□ -1.59
SMF2YHR050W GCV3P39726 170 aaPredicted RBP5.09□□□□□ -1.59
SMF2YHR050W PGD1P40356 397 aa5.09□□□□□ -1.59
SMF2YHR050W PHO23P50947 330 aa5.09□□□□□ -1.59
SMF2YHR050W SUT1P53032 299 aaKnown RBP5.09□□□□□ -1.59
SMF2YHR050W VHT1P53241 593 aa5.09□□□□□ -1.59
SMF2YHR050W RHO5P53879 331 aaKnown RBP5.09□□□□□ -1.59
SMF2YHR050W ERV25P54837 211 aaKnown RBP5.09□□□□□ -1.59
SMF2YHR050W YMR210WQ03649 449 aa5.09□□□□□ -1.59
SMF2YHR050W TPP1Q03796 238 aa5.09□□□□□ -1.59
SMF2YHR050W UTP15Q04305 513 aaKnown RBP5.09□□□□□ -1.59
SMF2YHR050W MRX8Q05473 314 aa5.09□□□□□ -1.59
SMF2YHR050W PAL1Q05518 499 aaKnown RBP5.09□□□□□ -1.59
SMF2YHR050W CRR1Q05790 422 aa5.09□□□□□ -1.59
SMF2YHR050W BSC6Q08280 497 aa5.09□□□□□ -1.59
SMF2YHR050W TY1A-GR1Q12085 440 aa5.09□□□□□ -1.59
SMF2YHR050W RTK1Q12100 620 aaPredicted RBP5.09□□□□□ -1.59
SMF2YHR050W TMS1Q12116 473 aa5.09□□□□□ -1.59
SMF2YHR050W DGK1Q12382 290 aa5.09□□□□□ -1.59
SMF2YHR050W TRM13Q12383 476 aa5.09□□□□□ -1.59
SMF2YHR050W RRI1Q12468 440 aa5.09□□□□□ -1.59
SMF2YHR050W CMC2Q3E7A4 109 aa5.09□□□□□ -1.59
SMF2YHR050W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.09□□□□□ -1.59
SMF2YHR050W TY1A-OLQ92392 440 aaKnown RBP5.09□□□□□ -1.59
SMF2YHR050W HBN1Q96VH4 193 aa5.09□□□□□ -1.59
SMF2YHR050W POL2P21951 2222 aaKnown RBP5.09□□□□□ -1.59
SMF2YHR050W RPS13P05756 151 aaKnown RBP5.08□□□□□ -1.6
SMF2YHR050W PRB1P09232 635 aa5.08□□□□□ -1.6
SMF2YHR050W HOM3P10869 527 aa5.08□□□□□ -1.6
SMF2YHR050W CPR2P23285 205 aa5.08□□□□□ -1.6
SMF2YHR050W YBL010CP32788 280 aa5.08□□□□□ -1.6
SMF2YHR050W VAM7P32912 316 aa5.08□□□□□ -1.6
SMF2YHR050W SPT10P35208 640 aa5.08□□□□□ -1.6
SMF2YHR050W CHS7P38843 316 aa5.08□□□□□ -1.6
SMF2YHR050W RPS26AP39938 119 aaKnown RBP5.08□□□□□ -1.6
SMF2YHR050W RPS26BP39939 119 aaKnown RBP5.08□□□□□ -1.6
SMF2YHR050W YNL208WP40159 199 aaKnown RBP5.08□□□□□ -1.6
SMF2YHR050W LYS20P48570 428 aaKnown RBP5.08□□□□□ -1.6
SMF2YHR050W YGL159WP53110 370 aa5.08□□□□□ -1.6
SMF2YHR050W MTM1P53320 366 aa5.08□□□□□ -1.6
SMF2YHR050W NRK1P53915 240 aa5.08□□□□□ -1.6
SMF2YHR050W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
SMF2YHR050W SRP1Q02821 542 aaKnown RBP5.08□□□□□ -1.6
SMF2YHR050W VMA9Q3E7B6 73 aa5.08□□□□□ -1.6
SMF2YHR050W ARF1P11076 181 aaKnown RBP5.08□□□□□ -1.6
SMF2YHR050W GLK1P17709 500 aaKnown RBP5.08□□□□□ -1.6
SMF2YHR050W RPB8P20436 146 aa5.08□□□□□ -1.6
SMF2YHR050W YCR006CP25350 157 aa5.08□□□□□ -1.6
SMF2YHR050W FAA1P30624 700 aaKnown RBP5.08□□□□□ -1.6
SMF2YHR050W MLF3P32047 452 aa5.08□□□□□ -1.6
SMF2YHR050W SRP102P36057 244 aaPredicted RBP5.08□□□□□ -1.6
SMF2YHR050W SHM2P37291 469 aaKnown RBP5.08□□□□□ -1.6
SMF2YHR050W ARO9P38840 513 aaPredicted RBP5.08□□□□□ -1.6
SMF2YHR050W ASP1P38986 381 aaPredicted RBP5.08□□□□□ -1.6
SMF2YHR050W SEN34P39707 275 aa5.08□□□□□ -1.6
SMF2YHR050W NAS2P40555 220 aa5.08□□□□□ -1.6
SMF2YHR050W SYS1P41544 203 aa5.08□□□□□ -1.6
SMF2YHR050W YFR054CP43622 192 aa5.08□□□□□ -1.6
SMF2YHR050W UBX6P47049 396 aa5.08□□□□□ -1.6
SMF2YHR050W MCM22P47167 239 aa5.08□□□□□ -1.6
SMF2YHR050W YNR014WP53719 212 aa5.08□□□□□ -1.6
SMF2YHR050W RVB1Q03940 463 aaKnown RBP5.08□□□□□ -1.6
SMF2YHR050W TY1A-DR2Q03964 440 aaKnown RBP5.08□□□□□ -1.6
SMF2YHR050W YOR352WQ08816 343 aa5.08□□□□□ -1.6
SMF2YHR050W YOR385WQ08909 290 aa5.08□□□□□ -1.6
SMF2YHR050W PRM4Q12498 284 aa5.08□□□□□ -1.6
SMF2YHR050W TAD3Q9URQ3 322 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms