RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C SFH1Q06168 426 aa1.78□□□□□ -2.12
PGD1YGL025C SEC10Q06245 871 aa1.78□□□□□ -2.12
PGD1YGL025C RUD3Q12234 484 aaKnown RBP1.78□□□□□ -2.12
PGD1YGL025C YIL002W-AQ3E7Z5 69 aa1.78□□□□□ -2.12
PGD1YGL025C SSK22P25390 1331 aaPredicted RBP1.77□□□□□ -2.13
PGD1YGL025C RPC40P07703 335 aaKnown RBP1.77□□□□□ -2.13
PGD1YGL025C PPH21P23594 369 aa1.77□□□□□ -2.13
PGD1YGL025C DPB2P24482 689 aaPredicted RBP1.77□□□□□ -2.13
PGD1YGL025C PEX3P28795 441 aa1.77□□□□□ -2.13
PGD1YGL025C ARC19P33204 171 aaKnown RBP1.77□□□□□ -2.13
PGD1YGL025C GRE3P38715 327 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
PGD1YGL025C RRF1P38771 230 aa1.77□□□□□ -2.13
PGD1YGL025C NPT1P39683 429 aaKnown RBP1.77□□□□□ -2.13
PGD1YGL025C MRPL49P40858 161 aaPredicted RBP1.77□□□□□ -2.13
PGD1YGL025C BAT2P47176 376 aaKnown RBP1.77□□□□□ -2.13
PGD1YGL025C ATC1Q04005 294 aa1.77□□□□□ -2.13
PGD1YGL025C SMT3Q12306 101 aaKnown RBP1.77□□□□□ -2.13
PGD1YGL025C YOS9Q99220 542 aa1.77□□□□□ -2.13
PGD1YGL025C AI5_BETAQ9ZZX0 354 aa1.77□□□□□ -2.13
PGD1YGL025C CFT1Q06632 1357 aaKnown RBP1.76□□□□□ -2.13
PGD1YGL025C RPB4P20433 221 aaPredicted RBP1.76□□□□□ -2.13
PGD1YGL025C MRPL25P23369 157 aa1.76□□□□□ -2.13
PGD1YGL025C ICL1P28240 557 aaPredicted RBP1.76□□□□□ -2.13
PGD1YGL025C SFC1P33303 322 aa1.76□□□□□ -2.13
PGD1YGL025C AGX1P43567 385 aa1.76□□□□□ -2.13
PGD1YGL025C YJL028WP47062 111 aa1.76□□□□□ -2.13
PGD1YGL025C YJL027CP47063 138 aaPredicted RBP1.76□□□□□ -2.13
PGD1YGL025C NBP35P52920 328 aa1.76□□□□□ -2.13
PGD1YGL025C NIF3P53081 288 aa1.76□□□□□ -2.13
PGD1YGL025C MDM34P53083 459 aa1.76□□□□□ -2.13
PGD1YGL025C LSB1P53281 241 aa1.76□□□□□ -2.13
PGD1YGL025C YNL247WP53852 767 aaKnown RBP1.76□□□□□ -2.13
PGD1YGL025C SWS2P53937 143 aa1.76□□□□□ -2.13
PGD1YGL025C SNZ1Q03148 297 aa1.76□□□□□ -2.13
PGD1YGL025C YHR086W-AQ3E746 53 aa1.76□□□□□ -2.13
PGD1YGL025C RPL4AP10664 362 aaKnown RBP1.75□□□□□ -2.13
PGD1YGL025C POF1P25576 258 aa1.75□□□□□ -2.13
PGD1YGL025C MRPL40P36534 297 aa1.75□□□□□ -2.13
PGD1YGL025C YHL049CP38722 271 aa1.75□□□□□ -2.13
PGD1YGL025C SPT8P38915 602 aa1.75□□□□□ -2.13
PGD1YGL025C TIF34P40217 347 aaKnown RBP1.75□□□□□ -2.13
PGD1YGL025C RPL4BP49626 362 aaKnown RBP1.75□□□□□ -2.13
PGD1YGL025C EGD1Q02642 157 aaKnown RBP1.75□□□□□ -2.13
PGD1YGL025C RNH1Q04740 348 aa1.75□□□□□ -2.13
PGD1YGL025C GEP5Q12393 293 aa1.75□□□□□ -2.13
PGD1YGL025C EMC6Q12431 108 aa1.75□□□□□ -2.13
PGD1YGL025C TCB3Q03640 1545 aaKnown RBP1.75□□□□□ -2.13
PGD1YGL025C DBP3P20447 523 aaKnown RBP1.74□□□□□ -2.13
PGD1YGL025C ACP1P32463 125 aa1.74□□□□□ -2.13
PGD1YGL025C YHL026CP38740 315 aa1.74□□□□□ -2.13
PGD1YGL025C TEM1P38987 245 aa1.74□□□□□ -2.13
PGD1YGL025C RTT105P40063 208 aa1.74□□□□□ -2.13
PGD1YGL025C FMP33P46998 180 aa1.74□□□□□ -2.13
PGD1YGL025C ERV25P54837 211 aaKnown RBP1.74□□□□□ -2.13
PGD1YGL025C SSQ1Q05931 657 aaPredicted RBP1.74□□□□□ -2.13
PGD1YGL025C RRP36Q12481 300 aaPredicted RBP1.74□□□□□ -2.13
PGD1YGL025C IKI3Q06706 1349 aaKnown RBP1.73□□□□□ -2.13
PGD1YGL025C YSR3P23501 404 aa1.73□□□□□ -2.13
PGD1YGL025C YCR102CP25608 368 aa1.73□□□□□ -2.13
PGD1YGL025C YOR062CP36025 268 aa1.73□□□□□ -2.13
PGD1YGL025C DRE2P36152 348 aa1.73□□□□□ -2.13
PGD1YGL025C EMI1Q04406 187 aa1.73□□□□□ -2.13
PGD1YGL025C YLR413WQ06689 675 aa1.73□□□□□ -2.13
PGD1YGL025C FMP16Q12497 93 aa1.73□□□□□ -2.13
PGD1YGL025C STH1P32597 1359 aa1.72□□□□□ -2.13
PGD1YGL025C ADH3P07246 375 aaKnown RBP1.72□□□□□ -2.13
PGD1YGL025C OM45P16547 393 aa1.72□□□□□ -2.13
PGD1YGL025C RNP1P32385 249 aa1.72□□□□□ -2.13
PGD1YGL025C RIB7P33312 244 aa1.72□□□□□ -2.13
PGD1YGL025C PEX18P38855 283 aa1.72□□□□□ -2.13
PGD1YGL025C TAD2P47058 250 aa1.72□□□□□ -2.13
PGD1YGL025C MNT4P53745 580 aa1.72□□□□□ -2.13
PGD1YGL025C PEX12Q04370 399 aa1.72□□□□□ -2.13
PGD1YGL025C ATG38Q05789 226 aaKnown RBP1.72□□□□□ -2.13
PGD1YGL025C BOP2Q06150 570 aa1.72□□□□□ -2.13
PGD1YGL025C PER33Q12144 273 aa1.72□□□□□ -2.13
PGD1YGL025C MRPL23Q12487 163 aaPredicted RBP1.72□□□□□ -2.13
PGD1YGL025C SKI3P17883 1432 aaKnown RBP1.72□□□□□ -2.13
PGD1YGL025C DSF1P0CX08 502 aa1.71□□□□□ -2.14
PGD1YGL025C YNR073CP0CX09 502 aa1.71□□□□□ -2.14
PGD1YGL025C POX1P13711 748 aa1.71□□□□□ -2.14
PGD1YGL025C YKL070WP36087 169 aa1.71□□□□□ -2.14
PGD1YGL025C ECM13P38195 257 aa1.71□□□□□ -2.14
PGD1YGL025C HSM3P38348 480 aa1.71□□□□□ -2.14
PGD1YGL025C PRM9P39551 298 aa1.71□□□□□ -2.14
PGD1YGL025C DSN1P40568 576 aa1.71□□□□□ -2.14
PGD1YGL025C EMC2P47133 292 aaKnown RBP1.71□□□□□ -2.14
PGD1YGL025C AAH1P53909 347 aa1.71□□□□□ -2.14
PGD1YGL025C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
PGD1YGL025C RSM10Q03201 203 aa1.71□□□□□ -2.14
PGD1YGL025C EBS1Q03466 884 aaKnown RBP1.71□□□□□ -2.14
PGD1YGL025C BRX1Q08235 291 aaKnown RBP1.71□□□□□ -2.14
PGD1YGL025C SGA1P08019 549 aa1.7□□□□□ -2.14
PGD1YGL025C BMH2P34730 273 aaKnown RBP1.7□□□□□ -2.14
PGD1YGL025C MAL32P38158 584 aa1.7□□□□□ -2.14
PGD1YGL025C HEK2P38199 381 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14 RIP-Chip
PGD1YGL025C SSN2P38931 1420 aa1.7□□□□□ -2.14
PGD1YGL025C SHC1P39000 512 aa1.7□□□□□ -2.14
PGD1YGL025C YHB1P39676 399 aaKnown RBP1.7□□□□□ -2.14
PGD1YGL025C RSM25P40496 264 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms