RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	ERV41	Q04651	352 aa		1.47	□□□□□ -2.17
DOT6	YER088C	MRX9	Q07349	420 aa	Known RBP	1.47	□□□□□ -2.17
DOT6	YER088C	RDL2	Q08742	149 aa	Known RBP	1.47	□□□□□ -2.17
DOT6	YER088C	RTC5	Q12108	567 aa	Known RBP	1.47	□□□□□ -2.17
DOT6	YER088C	RGS2	Q99188	309 aa		1.47	□□□□□ -2.17
DOT6	YER088C	BI3	Q9ZZW7	517 aa		1.47	□□□□□ -2.17
DOT6	YER088C	BCY1	P07278	416 aa	Known RBP	1.46	□□□□□ -2.18
DOT6	YER088C	MSS116	P15424	664 aa	Known RBP	1.46	□□□□□ -2.18
DOT6	YER088C	ZRT3	P34240	503 aa		1.46	□□□□□ -2.18
DOT6	YER088C	YKL162C	P36052	402 aa		1.46	□□□□□ -2.18
DOT6	YER088C	YEL075C	P39972	122 aa		1.46	□□□□□ -2.18
DOT6	YER088C	SPO73	P40031	143 aa		1.46	□□□□□ -2.18
DOT6	YER088C	SNZ3	P43545	298 aa		1.46	□□□□□ -2.18
DOT6	YER088C	BUD13	P46947	266 aa	Predicted RBP	1.46	□□□□□ -2.18
DOT6	YER088C	RPC17	P47076	161 aa		1.46	□□□□□ -2.18
DOT6	YER088C	SNZ2	P53824	298 aa		1.46	□□□□□ -2.18
DOT6	YER088C	INP1	Q03694	420 aa		1.46	□□□□□ -2.18
DOT6	YER088C	RVB1	Q03940	463 aa	Known RBP	1.46	□□□□□ -2.18
DOT6	YER088C	VPS20	Q04272	221 aa		1.46	□□□□□ -2.18
DOT6	YER088C	GMC1	Q04399	608 aa		1.46	□□□□□ -2.18
DOT6	YER088C	MRX8	Q05473	314 aa		1.46	□□□□□ -2.18
DOT6	YER088C	YPR195C	Q06594	109 aa		1.46	□□□□□ -2.18
DOT6	YER088C	MDY2	Q12285	212 aa		1.46	□□□□□ -2.18
DOT6	YER088C	YPS3	Q12303	508 aa		1.46	□□□□□ -2.18
DOT6	YER088C	EMP46	Q12396	444 aa		1.46	□□□□□ -2.18
DOT6	YER088C	RPL18A	P0CX49	186 aa	Known RBP	1.45	□□□□□ -2.18
DOT6	YER088C	RPL18B	P0CX50	186 aa	Known RBP	1.45	□□□□□ -2.18
DOT6	YER088C	SPS100	P13130	326 aa		1.45	□□□□□ -2.18
DOT6	YER088C	YSR3	P23501	404 aa		1.45	□□□□□ -2.18
DOT6	YER088C	VMA5	P31412	392 aa	Known RBP	1.45	□□□□□ -2.18
DOT6	YER088C	YER189W	P40104	122 aa		1.45	□□□□□ -2.18
DOT6	YER088C	YIL086C	P40503	102 aa		1.45	□□□□□ -2.18
DOT6	YER088C	INA22	P40576	216 aa		1.45	□□□□□ -2.18
DOT6	YER088C	FMP48	P53233	369 aa		1.45	□□□□□ -2.18
DOT6	YER088C	LAG2	Q92325	660 aa		1.45	□□□□□ -2.18
DOT6	YER088C	CDC39	P25655	2108 aa	Known RBP	1.45	□□□□□ -2.18
DOT6	YER088C	BLM10	P43583	2143 aa		1.45	□□□□□ -2.18
DOT6	YER088C	RPC40	P07703	335 aa	Known RBP	1.45	□□□□□ -2.18
DOT6	YER088C	CPT1	P17898	393 aa		1.45	□□□□□ -2.18
DOT6	YER088C	YCR102C	P25608	368 aa		1.45	□□□□□ -2.18
DOT6	YER088C	DAL80	P26343	269 aa		1.45	□□□□□ -2.18
DOT6	YER088C	ZIP1	P31111	875 aa		1.45	□□□□□ -2.18
DOT6	YER088C	ACB1	P31787	87 aa		1.45	□□□□□ -2.18
DOT6	YER088C	PRX1	P34227	261 aa	Known RBP	1.45	□□□□□ -2.18
DOT6	YER088C	KTI12	P34253	313 aa	Known RBP	1.45	□□□□□ -2.18
DOT6	YER088C	SWC5	P38326	303 aa		1.45	□□□□□ -2.18
DOT6	YER088C	YMR262W	P38430	313 aa		1.45	□□□□□ -2.18
DOT6	YER088C	CYC2	P38909	366 aa		1.45	□□□□□ -2.18
DOT6	YER088C	YEL028W	P39989	153 aa		1.45	□□□□□ -2.18
DOT6	YER088C	PCL7	P40186	285 aa		1.45	□□□□□ -2.18
DOT6	YER088C	AIM20	P40451	204 aa		1.45	□□□□□ -2.18
DOT6	YER088C	VTI1	Q04338	217 aa		1.45	□□□□□ -2.18
DOT6	YER088C	SWC7	Q06707	132 aa		1.45	□□□□□ -2.18
DOT6	YER088C	YRA1	Q12159	226 aa	Known RBP	1.45	□□□□□ -2.18
DOT6	YER088C	COX5A	P00424	153 aa		1.44	□□□□□ -2.18
DOT6	YER088C	CPA1	P07258	411 aa	Known RBP	1.44	□□□□□ -2.18
DOT6	YER088C	CDC33	P07260	213 aa	Known RBP	1.44	□□□□□ -2.18
DOT6	YER088C	GAL7	P08431	366 aa		1.44	□□□□□ -2.18
DOT6	YER088C	CUP2	P15315	225 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YPS1	P32329	569 aa		1.44	□□□□□ -2.18
DOT6	YER088C	SUR1	P33300	382 aa		1.44	□□□□□ -2.18
DOT6	YER088C	RRF1	P38771	230 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YDR089W	P38966	869 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YEL073C	P39974	107 aa		1.44	□□□□□ -2.18
DOT6	YER088C	MEP1	P40260	492 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YIL054W	P40524	105 aa		1.44	□□□□□ -2.18
DOT6	YER088C	CDC40	P40968	455 aa	Predicted RBP	1.44	□□□□□ -2.18
DOT6	YER088C	RPN14	P53196	417 aa		1.44	□□□□□ -2.18
DOT6	YER088C	OKP1	P53298	406 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YNR066C	P53752	436 aa		1.44	□□□□□ -2.18
DOT6	YER088C	HCH1	P53834	153 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YNL247W	P53852	767 aa	Known RBP	1.44	□□□□□ -2.18
DOT6	YER088C	UTP15	Q04305	513 aa	Known RBP	1.44	□□□□□ -2.18
DOT6	YER088C	EMI1	Q04406	187 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YMR111C	Q04461	462 aa	Predicted RBP	1.44	□□□□□ -2.18
DOT6	YER088C	GTO3	Q04806	366 aa		1.44	□□□□□ -2.18
DOT6	YER088C	LDB18	Q07887	179 aa		1.44	□□□□□ -2.18
DOT6	YER088C	AKR2	Q12013	749 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YOR342C	Q12182	319 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YOL107W	Q12239	342 aa		1.44	□□□□□ -2.18
DOT6	YER088C	GTT2	Q12390	233 aa		1.44	□□□□□ -2.18
DOT6	YER088C	TRM10	Q12400	293 aa		1.44	□□□□□ -2.18
DOT6	YER088C	PAA1	Q12447	191 aa	Known RBP	1.44	□□□□□ -2.18
DOT6	YER088C	OCA6	Q12454	224 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YIL002W-A	Q3E7Z5	69 aa		1.44	□□□□□ -2.18
DOT6	YER088C	RBK1	P25332	333 aa		1.44	□□□□□ -2.18
DOT6	YER088C	KRE6	P32486	720 aa		1.44	□□□□□ -2.18
DOT6	YER088C	AEP1	P32493	518 aa		1.44	□□□□□ -2.18
DOT6	YER088C	IME2	P32581	645 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YKT6	P36015	200 aa	Known RBP	1.44	□□□□□ -2.18
DOT6	YER088C	EBP2	P36049	427 aa	Known RBP	1.44	□□□□□ -2.18
DOT6	YER088C	YBR062C	P38239	180 aa		1.44	□□□□□ -2.18
DOT6	YER088C	AIM18	P38884	321 aa		1.44	□□□□□ -2.18
DOT6	YER088C	SOP4	P39543	234 aa	Predicted RBP	1.44	□□□□□ -2.18
DOT6	YER088C	MIC19	P43594	170 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YGR168C	P53293	376 aa		1.44	□□□□□ -2.18
DOT6	YER088C	IGO1	P53897	168 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YDR222W	Q04925	415 aa		1.44	□□□□□ -2.18
DOT6	YER088C	BUR2	Q05949	395 aa		1.44	□□□□□ -2.18
DOT6	YER088C	YPL264C	Q08980	353 aa		1.44	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 70.2 ms