RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	10.76	□□□□□ -0.69	not detected
NPL3	YDR432W	DBF2	P22204	572 aa		10.76	□□□□□ -0.69
NPL3	YDR432W	RPL24B	P24000	155 aa	Known RBP	10.76	□□□□□ -0.69
NPL3	YDR432W	DDI1	P40087	428 aa		10.76	□□□□□ -0.69
NPL3	YDR432W	OST1	P41543	476 aa	Known RBP	10.76	□□□□□ -0.69
NPL3	YDR432W	DUG3	P53871	357 aa		10.76	□□□□□ -0.69
NPL3	YDR432W	NOG1	Q02892	647 aa	Known RBP	10.76	□□□□□ -0.69
NPL3	YDR432W	GPI17	Q04080	534 aa		10.76	□□□□□ -0.69
NPL3	YDR432W	YMR252C	Q04814	134 aa		10.76	□□□□□ -0.69
NPL3	YDR432W	TPO3	Q06451	622 aa		10.76	□□□□□ -0.69
NPL3	YDR432W	IES3	Q12345	250 aa		10.76	□□□□□ -0.69
NPL3	YDR432W	YCL048W-A	Q2V2Q2	79 aa		10.76	□□□□□ -0.69
NPL3	YDR432W	TAL1	P15019	335 aa	Known RBP	10.75	□□□□□ -0.69
NPL3	YDR432W	FUN26	P31381	517 aa		10.75	□□□□□ -0.69
NPL3	YDR432W	MRT4	P33201	236 aa	Known RBP	10.75	□□□□□ -0.69
NPL3	YDR432W	YPK3	P38070	525 aa		10.75	□□□□□ -0.69
NPL3	YDR432W	TAT1	P38085	619 aa		10.75	□□□□□ -0.69
NPL3	YDR432W	YCK3	P39962	524 aa		10.75	□□□□□ -0.69
NPL3	YDR432W	PUG1	P40100	303 aa		10.75	□□□□□ -0.69
NPL3	YDR432W	TYW3	P53177	273 aa		10.75	□□□□□ -0.69
NPL3	YDR432W	MCM21	Q06675	368 aa		10.75	□□□□□ -0.69
NPL3	YDR432W	MDM36	Q06820	579 aa		10.75	□□□□□ -0.69
NPL3	YDR432W	TY1A-NL1	Q12391	440 aa	Known RBP	10.75	□□□□□ -0.69
NPL3	YDR432W	VMA11	P32842	164 aa		10.74	□□□□□ -0.69
NPL3	YDR432W	MCH2	P36032	473 aa		10.74	□□□□□ -0.69
NPL3	YDR432W	PCL6	P40038	420 aa		10.74	□□□□□ -0.69
NPL3	YDR432W	AAD14	P42884	376 aa		10.74	□□□□□ -0.69
NPL3	YDR432W	MTL1	P53214	551 aa		10.74	□□□□□ -0.69
NPL3	YDR432W	PAU12	P53343	120 aa		10.74	□□□□□ -0.69
NPL3	YDR432W	MSS11	Q03825	758 aa		10.74	□□□□□ -0.69
NPL3	YDR432W	MGR3	Q04472	501 aa		10.74	□□□□□ -0.69
NPL3	YDR432W	YPR1	Q12458	312 aa		10.74	□□□□□ -0.69
NPL3	YDR432W	YBL113C	Q7M4S9	792 aa		10.74	□□□□□ -0.69
NPL3	YDR432W	YEL009C-A	A0A023PZF2	135 aa		10.73	□□□□□ -0.69
NPL3	YDR432W	RPL39	P04650	51 aa		10.73	□□□□□ -0.69
NPL3	YDR432W	DPB2	P24482	689 aa	Predicted RBP	10.73	□□□□□ -0.69
NPL3	YDR432W	MTC2	P34246	357 aa		10.73	□□□□□ -0.69
NPL3	YDR432W	IES5	P40060	125 aa		10.73	□□□□□ -0.69
NPL3	YDR432W	YNR064C	P53750	290 aa		10.73	□□□□□ -0.69
NPL3	YDR432W	RRP17	Q04031	235 aa	Predicted RBP	10.73	□□□□□ -0.69
NPL3	YDR432W	HLR1	Q04429	423 aa		10.73	□□□□□ -0.69
NPL3	YDR432W	SSK1	Q07084	712 aa		10.73	□□□□□ -0.69
NPL3	YDR432W	MSA1	Q08471	629 aa		10.73	□□□□□ -0.69
NPL3	YDR432W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	10.73	□□□□□ -0.69	not detected
NPL3	YDR432W	PAU24	P38155	120 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	TIR3	P40552	269 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	PMT6	P42934	759 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	CTK2	P46962	323 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	YJL016W	P47072	561 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	YAE1	P47118	141 aa	Predicted RBP	10.72	□□□□□ -0.69
NPL3	YDR432W	BNA2	P47125	453 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	GEP7	P53171	287 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	SAM50	P53969	484 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	DLT1	Q04216	342 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	RIM9	Q04734	239 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	YPR098C	Q06089	161 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	TGS1	Q12052	315 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	USB1	Q12208	290 aa	Known RBP	10.72	□□□□□ -0.69
NPL3	YDR432W	FRE6	Q12473	712 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	YLR099W-A	Q3E798	87 aa		10.72	□□□□□ -0.69
NPL3	YDR432W	MES1	P00958	751 aa	Known RBP	10.71	□□□□□ -0.69
NPL3	YDR432W	ANR2	P36090	516 aa	Predicted RBP	10.71	□□□□□ -0.69
NPL3	YDR432W	PEX32	P38292	413 aa		10.71	□□□□□ -0.69
NPL3	YDR432W	YJL218W	P40892	196 aa	Known RBP	10.71	□□□□□ -0.69
NPL3	YDR432W	HHT1	P61830	136 aa		10.71	□□□□□ -0.69
NPL3	YDR432W	YDR514C	Q04408	483 aa		10.71	□□□□□ -0.69
NPL3	YDR432W	GAL83	Q04739	417 aa		10.71	□□□□□ -0.69
NPL3	YDR432W	NMA1	Q06178	401 aa	Known RBP	10.71	□□□□□ -0.69
NPL3	YDR432W	YLR108C	Q12259	485 aa		10.71	□□□□□ -0.69
NPL3	YDR432W	SIR2	P06700	562 aa		10.7	□□□□□ -0.7
NPL3	YDR432W	PRE7	P23724	241 aa	Known RBP	10.7	□□□□□ -0.7
NPL3	YDR432W	DEG1	P31115	442 aa	Known RBP	10.7	□□□□□ -0.7
NPL3	YDR432W	VPS17	P32913	551 aa		10.7	□□□□□ -0.7
NPL3	YDR432W	ARC40	P38328	384 aa	Known RBP	10.7	□□□□□ -0.7
NPL3	YDR432W	CTR2	P38865	189 aa		10.7	□□□□□ -0.7
NPL3	YDR432W	YNR048W	P53740	393 aa		10.7	□□□□□ -0.7
NPL3	YDR432W	GRX3	Q03835	250 aa		10.7	□□□□□ -0.7
NPL3	YDR432W	FMP42	Q04991	504 aa		10.7	□□□□□ -0.7
NPL3	YDR432W	RPL5	P26321	297 aa	Known RBP	10.69	□□□□□ -0.7
NPL3	YDR432W	FRM2	P37261	193 aa		10.69	□□□□□ -0.7
NPL3	YDR432W	GPX2	P38143	162 aa		10.69	□□□□□ -0.7
NPL3	YDR432W	GZF3	P42944	551 aa	Known RBP	10.69	□□□□□ -0.7
NPL3	YDR432W	YJR120W	P47157	116 aa		10.69	□□□□□ -0.7
NPL3	YDR432W	CCC1	P47818	322 aa		10.69	□□□□□ -0.7
NPL3	YDR432W	IMO32	P53219	342 aa		10.69	□□□□□ -0.7
NPL3	YDR432W	AHC2	P25649	128 aa		10.68	□□□□□ -0.7
NPL3	YDR432W	GPI18	P38211	433 aa		10.68	□□□□□ -0.7
NPL3	YDR432W	JLP2	P40206	208 aa		10.68	□□□□□ -0.7
NPL3	YDR432W	LYS20	P48570	428 aa	Known RBP	10.68	□□□□□ -0.7
NPL3	YDR432W	LYS21	Q12122	440 aa	Known RBP	10.68	□□□□□ -0.7
NPL3	YDR432W	TIR4	Q12218	487 aa	Predicted RBP	10.68	□□□□□ -0.7
NPL3	YDR432W	MRP1	P10662	321 aa	Known RBP	10.67	□□□□□ -0.7
NPL3	YDR432W	DOA4	P32571	926 aa		10.67	□□□□□ -0.7
NPL3	YDR432W	REC114	P32841	428 aa		10.67	□□□□□ -0.7
NPL3	YDR432W	YKL102C	P34249	101 aa		10.67	□□□□□ -0.7
NPL3	YDR432W	MTH1	P35198	433 aa		10.67	□□□□□ -0.7
NPL3	YDR432W	CIN2	P46670	268 aa		10.67	□□□□□ -0.7
NPL3	YDR432W	PXR1	P53335	271 aa	Predicted RBP	10.67	□□□□□ -0.7
NPL3	YDR432W	CPR8	P53728	308 aa		10.67	□□□□□ -0.7
NPL3	YDR432W	TSR2	Q06672	205 aa	Known RBP	10.67	□□□□□ -0.7

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms