RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	RPP0	P05317	312 aa	Known RBP	1.42	□□□□□ -2.18
SHE9	YDR393W	HIS3	P06633	220 aa		1.42	□□□□□ -2.18
SHE9	YDR393W	MSS116	P15424	664 aa	Known RBP	1.42	□□□□□ -2.18
SHE9	YDR393W	SWD2	P36104	329 aa	Predicted RBP	1.42	□□□□□ -2.18
SHE9	YDR393W	SSO2	P39926	295 aa		1.42	□□□□□ -2.18
SHE9	YDR393W	MRS2	Q01926	470 aa		1.42	□□□□□ -2.18
SHE9	YDR393W	TVP15	Q03860	143 aa		1.42	□□□□□ -2.18
SHE9	YDR393W	YDR286C	Q05530	114 aa		1.42	□□□□□ -2.18
SHE9	YDR393W	YPR064W	Q12492	139 aa		1.42	□□□□□ -2.18
SHE9	YDR393W	MEC1	P38111	2368 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	UBR2	Q07963	1872 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	IRA1	P18963	3092 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	RAD7	P06779	565 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	ADH3	P07246	375 aa	Known RBP	1.41	□□□□□ -2.18
SHE9	YDR393W	RPL31A	P0C2H8	113 aa	Known RBP	1.41	□□□□□ -2.18
SHE9	YDR393W	POX1	P13711	748 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	TRX1	P22217	103 aa	Known RBP	1.41	□□□□□ -2.18
SHE9	YDR393W	YCR025C	P25352	136 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	YKL063C	P35725	167 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	MPP10	P47083	593 aa	Known RBP	1.41	□□□□□ -2.18
SHE9	YDR393W	BIO4	P53630	237 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	SWT21	P53873	357 aa	Predicted RBP	1.41	□□□□□ -2.18
SHE9	YDR393W	YNL050C	P53952	270 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	VPS20	Q04272	221 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	MGR3	Q04472	501 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	YLL007C	Q07799	665 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	PGC1	Q08959	321 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	YPL150W	Q12152	901 aa		1.41	□□□□□ -2.18
SHE9	YDR393W	CAR2	P07991	424 aa	Known RBP	1.4	□□□□□ -2.19
SHE9	YDR393W	ZWF1	P11412	505 aa	Known RBP	1.4	□□□□□ -2.19
SHE9	YDR393W	SAR1	P20606	190 aa	Known RBP	1.4	□□□□□ -2.19
SHE9	YDR393W	AEP1	P32493	518 aa		1.4	□□□□□ -2.19
SHE9	YDR393W	SUR2	P38992	349 aa		1.4	□□□□□ -2.19
SHE9	YDR393W	RPE1	P46969	238 aa		1.4	□□□□□ -2.19
SHE9	YDR393W	LOH1	P47055	219 aa		1.4	□□□□□ -2.19
SHE9	YDR393W	YJR141W	P47172	347 aa	Predicted RBP	1.4	□□□□□ -2.19
SHE9	YDR393W	YPT32	P51996	222 aa	Known RBP	1.4	□□□□□ -2.19
SHE9	YDR393W	COG7	P53195	279 aa		1.4	□□□□□ -2.19
SHE9	YDR393W	YPL077C	Q02831	240 aa		1.4	□□□□□ -2.19
SHE9	YDR393W	YMR321C	Q04898	105 aa		1.4	□□□□□ -2.19
SHE9	YDR393W	APC9	Q12107	265 aa		1.4	□□□□□ -2.19
SHE9	YDR393W	SIA1	Q12212	622 aa		1.4	□□□□□ -2.19
SHE9	YDR393W	ATG5	Q12380	294 aa		1.4	□□□□□ -2.19
SHE9	YDR393W	UTP10	P42945	1769 aa	Known RBP	1.39	□□□□□ -2.19
SHE9	YDR393W	YBR056W-A	I2HB52	66 aa		1.39	□□□□□ -2.19
SHE9	YDR393W	GAL7	P08431	366 aa		1.39	□□□□□ -2.19
SHE9	YDR393W	RPL5	P26321	297 aa	Known RBP	1.39	□□□□□ -2.19
SHE9	YDR393W	CLB6	P32943	380 aa		1.39	□□□□□ -2.19
SHE9	YDR393W	PHO89	P38361	574 aa		1.39	□□□□□ -2.19
SHE9	YDR393W	TDA11	P38854	504 aa		1.39	□□□□□ -2.19
SHE9	YDR393W	AVT7	P40501	490 aa		1.39	□□□□□ -2.19
SHE9	YDR393W	GDS1	P41913	522 aa		1.39	□□□□□ -2.19
SHE9	YDR393W	DSK2	P48510	373 aa		1.39	□□□□□ -2.19
SHE9	YDR393W	TPN1	P53099	579 aa		1.39	□□□□□ -2.19
SHE9	YDR393W	VOA1	P53262	265 aa		1.39	□□□□□ -2.19
SHE9	YDR393W	YMR209C	Q03648	457 aa		1.39	□□□□□ -2.19
SHE9	YDR393W	YMR111C	Q04461	462 aa	Predicted RBP	1.39	□□□□□ -2.19
SHE9	YDR393W	DPP1	Q05521	289 aa		1.39	□□□□□ -2.19
SHE9	YDR393W	YOR283W	Q12040	230 aa	Known RBP	1.39	□□□□□ -2.19
SHE9	YDR393W	MLP1	Q02455	1875 aa	Known RBP	1.39	□□□□□ -2.19
SHE9	YDR393W	HFA1	P32874	2273 aa		1.38	□□□□□ -2.19
SHE9	YDR393W	RPS0A	P32905	252 aa	Known RBP	1.38	□□□□□ -2.19
SHE9	YDR393W	COY1	P34237	679 aa		1.38	□□□□□ -2.19
SHE9	YDR393W	DRE2	P36152	348 aa		1.38	□□□□□ -2.19
SHE9	YDR393W	SEN34	P39707	275 aa		1.38	□□□□□ -2.19
SHE9	YDR393W	CDC40	P40968	455 aa	Predicted RBP	1.38	□□□□□ -2.19
SHE9	YDR393W	PIR5	P46999	287 aa		1.38	□□□□□ -2.19
SHE9	YDR393W	GTO1	P48239	356 aa		1.38	□□□□□ -2.19
SHE9	YDR393W	RIB4	P50861	169 aa	Predicted RBP	1.38	□□□□□ -2.19
SHE9	YDR393W	SSU72	P53538	206 aa	Predicted RBP	1.38	□□□□□ -2.19
SHE9	YDR393W	YML018C	Q03730	393 aa		1.38	□□□□□ -2.19
SHE9	YDR393W	TAZ1	Q06510	381 aa		1.38	□□□□□ -2.19
SHE9	YDR393W	ASR1	Q06834	288 aa		1.38	□□□□□ -2.19
SHE9	YDR393W	RDS3	Q06835	107 aa	Predicted RBP	1.38	□□□□□ -2.19
SHE9	YDR393W	CSF1	Q12150	2958 aa		1.38	□□□□□ -2.19
SHE9	YDR393W	MSB2	P32334	1306 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	YEL009C-A	A0A023PZF2	135 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	TFS1	P14306	219 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	KRE6	P32486	720 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	COT1	P32798	439 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	RPC37	P36121	282 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	MOB1	P40484	314 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	YIA6	P40556	373 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	OST3	P48439	350 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	DBP6	P53734	629 aa	Known RBP	1.37	□□□□□ -2.19
SHE9	YDR393W	TAF9	Q05027	157 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	SPO77	Q06134	477 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	SUE1	Q06524	206 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	RTC5	Q12108	567 aa	Known RBP	1.37	□□□□□ -2.19
SHE9	YDR393W	ISD11	Q6Q560	94 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	ECM29	P38737	1868 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	SAC3	P46674	1301 aa		1.37	□□□□□ -2.19
SHE9	YDR393W	STF1	P01098	86 aa		1.36	□□□□□ -2.19
SHE9	YDR393W	GCD2	P12754	651 aa	Predicted RBP	1.36	□□□□□ -2.19
SHE9	YDR393W	OPI1	P21957	404 aa		1.36	□□□□□ -2.19
SHE9	YDR393W	ERG2	P32352	222 aa		1.36	□□□□□ -2.19
SHE9	YDR393W	SUA5	P32579	426 aa		1.36	□□□□□ -2.19
SHE9	YDR393W	CAT2	P32796	670 aa	Known RBP	1.36	□□□□□ -2.19
SHE9	YDR393W	SPT4	P32914	102 aa	Predicted RBP	1.36	□□□□□ -2.19
SHE9	YDR393W	POP8	P38208	133 aa		1.36	□□□□□ -2.19

Retrieved 100 of 5,963 RNA–protein pairs in 123.9 ms