RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C PEX3P28795 441 aa0.38□□□□□ -2.35
SSS1YDR086C UPS2P35200 230 aa0.38□□□□□ -2.35
SSS1YDR086C PHO88P38264 188 aaPredicted RBP0.38□□□□□ -2.35
SSS1YDR086C SWC5P38326 303 aa0.38□□□□□ -2.35
SSS1YDR086C YHR022CP38763 256 aa0.38□□□□□ -2.35
SSS1YDR086C FET3P38993 636 aa0.38□□□□□ -2.35
SSS1YDR086C IBA57P47158 497 aa0.38□□□□□ -2.35
SSS1YDR086C SLX9P53251 210 aaPredicted RBP0.38□□□□□ -2.35
SSS1YDR086C YNR062CP53748 327 aa0.38□□□□□ -2.35
SSS1YDR086C CYT2Q00873 224 aa0.38□□□□□ -2.35
SSS1YDR086C CTF19Q02732 369 aa0.38□□□□□ -2.35
SSS1YDR086C RSM10Q03201 203 aa0.38□□□□□ -2.35
SSS1YDR086C VPS20Q04272 221 aa0.38□□□□□ -2.35
SSS1YDR086C SLD7Q08457 257 aa0.38□□□□□ -2.35
SSS1YDR086C SIA1Q12212 622 aa0.38□□□□□ -2.35
SSS1YDR086C CPA1P07258 411 aaKnown RBP0.37□□□□□ -2.35
SSS1YDR086C CWP1P28319 239 aa0.37□□□□□ -2.35
SSS1YDR086C SWI3P32591 825 aa0.37□□□□□ -2.35
SSS1YDR086C UIP5P36137 443 aa0.37□□□□□ -2.35
SSS1YDR086C ECM13P38195 257 aa0.37□□□□□ -2.35
SSS1YDR086C TDA11P38854 504 aa0.37□□□□□ -2.35
SSS1YDR086C RCY1P39531 840 aa0.37□□□□□ -2.35
SSS1YDR086C LOH1P47055 219 aa0.37□□□□□ -2.35
SSS1YDR086C YGR026WP53217 278 aa0.37□□□□□ -2.35
SSS1YDR086C ARP5P53946 755 aa0.37□□□□□ -2.35
SSS1YDR086C ASR1Q06834 288 aa0.37□□□□□ -2.35
SSS1YDR086C CSI2Q08054 341 aa0.37□□□□□ -2.35
SSS1YDR086C PAA1Q12447 191 aaKnown RBP0.37□□□□□ -2.35
SSS1YDR086C CDC37P06101 506 aaKnown RBP0.36□□□□□ -2.35
SSS1YDR086C POT1P27796 417 aaKnown RBP RIP-Chip data0.36□□□□□ -2.35not detected
SSS1YDR086C TCD1P38756 429 aa0.36□□□□□ -2.35
SSS1YDR086C ARC15P40518 154 aaRIP-Chip data0.36□□□□□ -2.35not detected
SSS1YDR086C CDC40P40968 455 aaPredicted RBP0.36□□□□□ -2.35
SSS1YDR086C YMR279CQ03263 540 aa0.36□□□□□ -2.35
SSS1YDR086C RCF1Q03713 159 aa0.36□□□□□ -2.35
SSS1YDR086C ATC1Q04005 294 aa0.36□□□□□ -2.35
SSS1YDR086C YMR111CQ04461 462 aaPredicted RBP0.36□□□□□ -2.35
SSS1YDR086C YLR162WQ06235 118 aa0.36□□□□□ -2.35
SSS1YDR086C SEC10Q06245 871 aa0.36□□□□□ -2.35
SSS1YDR086C LOA1Q06508 300 aa0.36□□□□□ -2.35
SSS1YDR086C GPN3Q06543 272 aa0.36□□□□□ -2.35
SSS1YDR086C USB1Q12208 290 aaKnown RBP0.36□□□□□ -2.35
SSS1YDR086C NFI1Q12216 726 aa0.36□□□□□ -2.35
SSS1YDR086C ATO3Q12359 275 aa0.36□□□□□ -2.35
SSS1YDR086C YOS9Q99220 542 aa0.36□□□□□ -2.35
SSS1YDR086C PET18P25362 215 aa0.35□□□□□ -2.35
SSS1YDR086C COS8P38723 381 aa0.35□□□□□ -2.35
SSS1YDR086C PRM9P39551 298 aa0.35□□□□□ -2.35
SSS1YDR086C YKE4P40544 346 aa0.35□□□□□ -2.35
SSS1YDR086C YGR219WP53307 113 aa0.35□□□□□ -2.35
SSS1YDR086C AKR2Q12013 749 aa0.35□□□□□ -2.35
SSS1YDR086C ILV1P00927 576 aaKnown RBP0.34□□□□□ -2.36
SSS1YDR086C Q0255P03881 472 aa0.34□□□□□ -2.36
SSS1YDR086C CAR2P07991 424 aaKnown RBP0.34□□□□□ -2.36
SSS1YDR086C RPL4AP10664 362 aaKnown RBP0.34□□□□□ -2.36
SSS1YDR086C GPA2P10823 449 aa0.34□□□□□ -2.36
SSS1YDR086C RCN1P36054 211 aa0.34□□□□□ -2.36
SSS1YDR086C ERV15P38312 142 aa0.34□□□□□ -2.36
SSS1YDR086C SVP26P38869 228 aa0.34□□□□□ -2.36
SSS1YDR086C SMD3P43321 101 aaKnown RBP0.34□□□□□ -2.36
SSS1YDR086C RPL37AP49166 88 aaKnown RBP0.34□□□□□ -2.36
SSS1YDR086C RPL4BP49626 362 aaKnown RBP0.34□□□□□ -2.36
SSS1YDR086C EMI1Q04406 187 aa0.34□□□□□ -2.36
SSS1YDR086C PSY3Q12318 242 aa0.34□□□□□ -2.36
SSS1YDR086C EMP46Q12396 444 aa0.34□□□□□ -2.36
SSS1YDR086C AI5_BETAQ9ZZX0 354 aa0.34□□□□□ -2.36
SSS1YDR086C ICL1P28240 557 aaPredicted RBP0.33□□□□□ -2.36
SSS1YDR086C APE4P38821 490 aa0.33□□□□□ -2.36
SSS1YDR086C END3P39013 349 aa0.33□□□□□ -2.36
SSS1YDR086C AIM20P40451 204 aa0.33□□□□□ -2.36
SSS1YDR086C AGP3P43548 558 aa0.33□□□□□ -2.36
SSS1YDR086C KEL2P50090 882 aa0.33□□□□□ -2.36
SSS1YDR086C ERV29P53337 310 aa0.33□□□□□ -2.36
SSS1YDR086C BER1Q06688 274 aaKnown RBP0.33□□□□□ -2.36
SSS1YDR086C POM33Q12164 279 aa0.33□□□□□ -2.36
SSS1YDR086C ERP4Q12450 207 aa0.33□□□□□ -2.36
SSS1YDR086C SAR1P20606 190 aaKnown RBP0.32□□□□□ -2.36
SSS1YDR086C OAC1P32332 324 aa0.32□□□□□ -2.36
SSS1YDR086C PRS4P38063 326 aaPredicted RBP0.32□□□□□ -2.36
SSS1YDR086C RPL37BP51402 88 aaKnown RBP0.32□□□□□ -2.36
SSS1YDR086C TIM21P53220 239 aa0.32□□□□□ -2.36
SSS1YDR086C YMR007WQ03675 126 aa0.32□□□□□ -2.36
SSS1YDR086C YLR297WQ05899 129 aa0.32□□□□□ -2.36
SSS1YDR086C YHR032W-AP0C5N6 59 aa0.31□□□□□ -2.36
SSS1YDR086C YHL049CP38722 271 aa0.31□□□□□ -2.36
SSS1YDR086C YHR125WP38831 101 aa0.31□□□□□ -2.36
SSS1YDR086C SSO2P39926 295 aa0.31□□□□□ -2.36
SSS1YDR086C HUA1P40325 198 aa0.31□□□□□ -2.36
SSS1YDR086C SER33P40510 469 aa0.31□□□□□ -2.36
SSS1YDR086C YIL001WP40560 513 aa0.31□□□□□ -2.36
SSS1YDR086C VOA1P53262 265 aa0.31□□□□□ -2.36
SSS1YDR086C AIM36Q03798 255 aa0.31□□□□□ -2.36
SSS1YDR086C SML1Q04964 104 aa0.31□□□□□ -2.36
SSS1YDR086C CTR3Q06686 241 aa0.31□□□□□ -2.36
SSS1YDR086C RPL9AP05738 191 aaKnown RBP0.3□□□□□ -2.36
SSS1YDR086C RPC25P35718 212 aa0.3□□□□□ -2.36
SSS1YDR086C EBP2P36049 427 aaKnown RBP0.3□□□□□ -2.36
SSS1YDR086C HIS2P38635 335 aa0.3□□□□□ -2.36
SSS1YDR086C MNN9P39107 395 aaKnown RBP0.3□□□□□ -2.36
SSS1YDR086C AGE2P40529 298 aa0.3□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms