RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W AIF1P52923 378 aa1.2□□□□□ -2.22
CDC36YDL165W ARO8P53090 500 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W YGL138CP53122 345 aa1.2□□□□□ -2.22
CDC36YDL165W YGL114WP53134 725 aa1.2□□□□□ -2.22
CDC36YDL165W YGL101WP53144 215 aa1.2□□□□□ -2.22
CDC36YDL165W HHO1P53551 258 aa1.2□□□□□ -2.22
CDC36YDL165W YNR066CP53752 436 aa1.2□□□□□ -2.22
CDC36YDL165W YNL134CP53912 376 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W NRK1P53915 240 aa1.2□□□□□ -2.22
CDC36YDL165W COG5P53951 403 aa1.2□□□□□ -2.22
CDC36YDL165W YNL010WP53981 241 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W RPA49Q01080 415 aaPredicted RBP1.2□□□□□ -2.22
CDC36YDL165W SKO1Q02100 647 aa1.2□□□□□ -2.22
CDC36YDL165W SHR3Q02774 210 aa1.2□□□□□ -2.22
CDC36YDL165W YPL113CQ02961 396 aa1.2□□□□□ -2.22
CDC36YDL165W PIR3Q03180 325 aa1.2□□□□□ -2.22
CDC36YDL165W TDA1Q03533 586 aa1.2□□□□□ -2.22
CDC36YDL165W AIM36Q03798 255 aa1.2□□□□□ -2.22
CDC36YDL165W SMP3Q04174 516 aa1.2□□□□□ -2.22
CDC36YDL165W YML096WQ04489 525 aa1.2□□□□□ -2.22
CDC36YDL165W YDR124WQ04608 324 aa1.2□□□□□ -2.22
CDC36YDL165W CSM3Q04659 317 aa1.2□□□□□ -2.22
CDC36YDL165W YMR253CQ04835 414 aa1.2□□□□□ -2.22
CDC36YDL165W YDR278CQ05612 105 aa1.2□□□□□ -2.22
CDC36YDL165W YLR179CQ06252 201 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W CNL1Q06333 122 aa1.2□□□□□ -2.22
CDC36YDL165W CUR1Q06469 252 aa1.2□□□□□ -2.22
CDC36YDL165W CDD1Q06549 142 aa1.2□□□□□ -2.22
CDC36YDL165W MRX9Q07349 420 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W PRP11Q07350 266 aaPredicted RBP1.2□□□□□ -2.22
CDC36YDL165W ATG10Q07879 167 aa1.2□□□□□ -2.22
CDC36YDL165W YLR036CQ07986 203 aa1.2□□□□□ -2.22
CDC36YDL165W ALE1Q08548 619 aa1.2□□□□□ -2.22
CDC36YDL165W FSF1Q12029 327 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W SLF1Q12034 447 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W BTS1Q12051 335 aa1.2□□□□□ -2.22
CDC36YDL165W YPL150WQ12152 901 aa1.2□□□□□ -2.22
CDC36YDL165W YRA1Q12159 226 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W YLR046CQ12253 270 aa1.2□□□□□ -2.22
CDC36YDL165W TRM10Q12400 293 aa1.2□□□□□ -2.22
CDC36YDL165W MRPL23Q12487 163 aaPredicted RBP1.2□□□□□ -2.22
CDC36YDL165W RMD5Q12508 421 aa1.2□□□□□ -2.22
CDC36YDL165W SLO1Q3E784 85 aa1.2□□□□□ -2.22
CDC36YDL165W YLR361C-AQ3E795 98 aa1.2□□□□□ -2.22
CDC36YDL165W YDL085C-AQ3E7B7 68 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W RPS28AQ3E7X9 67 aaPredicted RBP1.2□□□□□ -2.22
CDC36YDL165W YPR014CQ6B0W2 109 aa1.2□□□□□ -2.22
CDC36YDL165W MEX67Q99257 599 aaKnown RBP1.2□□□□□ -2.22
CDC36YDL165W FSH3Q99369 266 aa1.2□□□□□ -2.22
CDC36YDL165W PET20Q99373 253 aa1.2□□□□□ -2.22
CDC36YDL165W NUP159P40477 1460 aa1.19□□□□□ -2.22
CDC36YDL165W MDS3P53094 1487 aa1.19□□□□□ -2.22
CDC36YDL165W TDH2P00358 332 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W TDH3P00359 332 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
CDC36YDL165W COX5BP00425 151 aa1.19□□□□□ -2.22
CDC36YDL165W TPI1P00942 248 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W COX4P04037 155 aa1.19□□□□□ -2.22
CDC36YDL165W RPL22AP05749 121 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W BCY1P07278 416 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W LTE1P07866 1435 aa1.19□□□□□ -2.22
CDC36YDL165W ATP5P09457 212 aa1.19□□□□□ -2.22
CDC36YDL165W YBR121C-AP0C5L4 52 aa1.19□□□□□ -2.22
CDC36YDL165W YFR010W-AP0C5N0 62 aa1.19□□□□□ -2.22
CDC36YDL165W RPS18AP0CX55 146 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W RPS18BP0CX56 146 aaPredicted RBP1.19□□□□□ -2.22
CDC36YDL165W RPL3P14126 387 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W ARO3P14843 370 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W ERD2P18414 219 aa1.19□□□□□ -2.22
CDC36YDL165W STE18P18852 110 aa1.19□□□□□ -2.22
CDC36YDL165W SAM2P19358 384 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W DAL82P21705 255 aa1.19□□□□□ -2.22
CDC36YDL165W MEK1P24719 497 aaPredicted RBP1.19□□□□□ -2.22
CDC36YDL165W YCR023CP25351 611 aa1.19□□□□□ -2.22
CDC36YDL165W YCR007CP25354 239 aa1.19□□□□□ -2.22
CDC36YDL165W YCL068CP25593 260 aa1.19□□□□□ -2.22
CDC36YDL165W UBC8P28263 218 aa1.19□□□□□ -2.22
CDC36YDL165W SUA7P29055 345 aaPredicted RBP1.19□□□□□ -2.22
CDC36YDL165W LDS1P31379 325 aa1.19□□□□□ -2.22
CDC36YDL165W MSK1P32048 576 aa1.19□□□□□ -2.22
CDC36YDL165W ARO7P32178 256 aa1.19□□□□□ -2.22
CDC36YDL165W APE2P32454 952 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W AEP1P32493 518 aa1.19□□□□□ -2.22
CDC36YDL165W UTR4P32626 227 aa1.19□□□□□ -2.22
CDC36YDL165W UGX2P32772 223 aa1.19□□□□□ -2.22
CDC36YDL165W WBP1P33767 430 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W TIR2P33890 251 aa1.19□□□□□ -2.22
CDC36YDL165W SSS1P35179 80 aa1.19□□□□□ -2.22
CDC36YDL165W PTK1P36002 662 aaPredicted RBP1.19□□□□□ -2.22
CDC36YDL165W DRE2P36152 348 aa1.19□□□□□ -2.22
CDC36YDL165W SOL2P37262 315 aa1.19□□□□□ -2.22
CDC36YDL165W IST2P38250 946 aa1.19□□□□□ -2.22
CDC36YDL165W WSC4P38739 605 aa1.19□□□□□ -2.22
CDC36YDL165W IPI1P38803 334 aaPredicted RBP1.19□□□□□ -2.22
CDC36YDL165W YHR127WP38833 243 aaKnown RBP1.19□□□□□ -2.22
CDC36YDL165W NSG1P38837 291 aa1.19□□□□□ -2.22
CDC36YDL165W FAD1P38913 306 aa1.19□□□□□ -2.22
CDC36YDL165W COG3P40094 801 aa1.19□□□□□ -2.22
CDC36YDL165W SWM2P40342 146 aa1.19□□□□□ -2.22
CDC36YDL165W RFC2P40348 353 aa1.19□□□□□ -2.22
CDC36YDL165W MOB1P40484 314 aa1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms