RNA–Protein interactions for RNA: YCR093W

CDC39, Transcript of Component of the CCR4-NOT1 core complex, yeastyeast

Gene CDC39, Length 6,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC39YCR093W PEX30Q06169 523 aa0.96□□□□□ -2.26
CDC39YCR093W RLP24Q07915 199 aaKnown RBP0.96□□□□□ -2.26
CDC39YCR093W YOR292CQ08743 309 aa0.96□□□□□ -2.26
CDC39YCR093W YPL257WQ08974 193 aa0.96□□□□□ -2.26
CDC39YCR093W YPL264CQ08980 353 aa0.96□□□□□ -2.26
CDC39YCR093W SME1Q12330 94 aaPredicted RBP0.96□□□□□ -2.26
CDC39YCR093W YBL111CQ3E7Y5 667 aa0.96□□□□□ -2.26
CDC39YCR093W DET1Q99288 334 aaKnown RBP0.96□□□□□ -2.26
CDC39YCR093W ATP6P00854 259 aa0.96□□□□□ -2.26
CDC39YCR093W PPA2P28239 310 aa0.96□□□□□ -2.26
CDC39YCR093W AST1P35183 429 aa0.96□□□□□ -2.26
CDC39YCR093W DRE2P36152 348 aa0.96□□□□□ -2.26
CDC39YCR093W SEN34P39707 275 aa0.96□□□□□ -2.26
CDC39YCR093W MEP1P40260 492 aa0.96□□□□□ -2.26
CDC39YCR093W TMA22P47089 198 aaPredicted RBP0.96□□□□□ -2.26
CDC39YCR093W MND1P53102 219 aa0.96□□□□□ -2.26
CDC39YCR093W CAX4P53223 239 aa0.96□□□□□ -2.26
CDC39YCR093W PET117Q02771 107 aa0.96□□□□□ -2.26
CDC39YCR093W RRP40Q08285 240 aaKnown RBP0.96□□□□□ -2.26
CDC39YCR093W TMC1Q08422 150 aaPredicted RBP0.96□□□□□ -2.26
CDC39YCR093W TAF10Q12030 206 aa0.96□□□□□ -2.26
CDC39YCR093W SNF8Q12483 233 aa0.96□□□□□ -2.26
CDC39YCR093W FUS3P16892 353 aaKnown RBP0.96□□□□□ -2.26
CDC39YCR093W TEL1P38110 2787 aa0.96□□□□□ -2.26
CDC39YCR093W TAE1P38340 232 aa0.96□□□□□ -2.26
CDC39YCR093W YPT32P51996 222 aaKnown RBP0.96□□□□□ -2.26
CDC39YCR093W BIO4P53630 237 aa0.96□□□□□ -2.26
CDC39YCR093W RMI1Q02685 241 aa0.96□□□□□ -2.26
CDC39YCR093W TVP15Q03860 143 aa0.96□□□□□ -2.26
CDC39YCR093W YPR098CQ06089 161 aa0.96□□□□□ -2.26
CDC39YCR093W YOL107WQ12239 342 aa0.96□□□□□ -2.26
CDC39YCR093W RPL31AP0C2H8 113 aaKnown RBP0.96□□□□□ -2.26
CDC39YCR093W IDH1P28834 360 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26not detected
CDC39YCR093W STP2P38704 541 aa0.96□□□□□ -2.26
CDC39YCR093W NIF3P53081 288 aa0.96□□□□□ -2.26
CDC39YCR093W SWT21P53873 357 aaPredicted RBP0.96□□□□□ -2.26
CDC39YCR093W OSH6Q02201 448 aa0.96□□□□□ -2.26
CDC39YCR093W CUR1Q06469 252 aa0.96□□□□□ -2.26
CDC39YCR093W CPT1P17898 393 aa0.96□□□□□ -2.26
CDC39YCR093W VMA6P32366 345 aaKnown RBP0.96□□□□□ -2.26
CDC39YCR093W TPO5P36029 618 aa0.96□□□□□ -2.26
CDC39YCR093W HEK2P38199 381 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26not detected
CDC39YCR093W FYV6P53913 173 aa0.96□□□□□ -2.26
CDC39YCR093W YML018CQ03730 393 aa0.96□□□□□ -2.26
CDC39YCR093W MHR1Q06630 226 aa0.96□□□□□ -2.26
CDC39YCR093W RPP0P05317 312 aaKnown RBP0.95□□□□□ -2.26
CDC39YCR093W COQ1P18900 473 aa0.95□□□□□ -2.26
CDC39YCR093W FAR1P21268 830 aa0.95□□□□□ -2.26
CDC39YCR093W MEK1P24719 497 aaPredicted RBP0.95□□□□□ -2.26
CDC39YCR093W ZRT3P34240 503 aa0.95□□□□□ -2.26
CDC39YCR093W YIL012WP40551 113 aa0.95□□□□□ -2.26
CDC39YCR093W VMA13P41807 478 aaKnown RBP0.95□□□□□ -2.26
CDC39YCR093W YAL064W-BO13512 126 aa0.95□□□□□ -2.26
CDC39YCR093W TPI1P00942 248 aaKnown RBP0.95□□□□□ -2.26
CDC39YCR093W NHP6BP11633 99 aaKnown RBP0.95□□□□□ -2.26
CDC39YCR093W DTR1P38125 572 aa0.95□□□□□ -2.26
CDC39YCR093W HSM3P38348 480 aa0.95□□□□□ -2.26
CDC39YCR093W YGP1P38616 354 aaKnown RBP0.95□□□□□ -2.26
CDC39YCR093W YHR045WP38775 560 aa0.95□□□□□ -2.26
CDC39YCR093W CDH1P53197 566 aa0.95□□□□□ -2.26
CDC39YCR093W ABF2Q02486 183 aa0.95□□□□□ -2.26
CDC39YCR093W INP2Q03824 705 aa0.95□□□□□ -2.26
CDC39YCR093W CSM3Q04659 317 aa0.95□□□□□ -2.26
CDC39YCR093W CSM4Q08955 156 aa0.95□□□□□ -2.26
CDC39YCR093W YCT1Q12235 531 aa0.95□□□□□ -2.26
CDC39YCR093W COX3P00420 269 aa0.95□□□□□ -2.26
CDC39YCR093W DPB2P24482 689 aaPredicted RBP0.95□□□□□ -2.26
CDC39YCR093W IME2P32581 645 aa0.95□□□□□ -2.26
CDC39YCR093W MAL32P38158 584 aa0.95□□□□□ -2.26
CDC39YCR093W YHL026CP38740 315 aa0.95□□□□□ -2.26
CDC39YCR093W PRM9P39551 298 aa0.95□□□□□ -2.26
CDC39YCR093W BDH1P39714 382 aa0.95□□□□□ -2.26
CDC39YCR093W YGR067CP53243 804 aa0.95□□□□□ -2.26
CDC39YCR093W MAL12P53341 584 aa0.95□□□□□ -2.26
CDC39YCR093W DBP6P53734 629 aaKnown RBP0.95□□□□□ -2.26
CDC39YCR093W SRL4Q03085 281 aa0.95□□□□□ -2.26
CDC39YCR093W GTO3Q04806 366 aa0.95□□□□□ -2.26
CDC39YCR093W ARV1Q06541 321 aa0.95□□□□□ -2.26
CDC39YCR093W DSE1P40077 573 aa0.95□□□□□ -2.26
CDC39YCR093W CDC40P40968 455 aaPredicted RBP0.95□□□□□ -2.26
CDC39YCR093W UFE1P41834 346 aa0.95□□□□□ -2.26
CDC39YCR093W CTK3P46963 296 aaPredicted RBP0.95□□□□□ -2.26
CDC39YCR093W DSK2P48510 373 aa0.95□□□□□ -2.26
CDC39YCR093W UBC13P52490 153 aa0.95□□□□□ -2.26
CDC39YCR093W HOP2P53187 214 aa0.95□□□□□ -2.26
CDC39YCR093W FRE8Q12209 686 aa0.95□□□□□ -2.26
CDC39YCR093W FMP16Q12497 93 aa0.95□□□□□ -2.26
CDC39YCR093W POX1P13711 748 aa0.95□□□□□ -2.26
CDC39YCR093W RSM25P40496 264 aa0.95□□□□□ -2.26
CDC39YCR093W MAL13P53338 473 aa0.95□□□□□ -2.26
CDC39YCR093W MRS2Q01926 470 aa0.95□□□□□ -2.26
CDC39YCR093W FAR10Q06001 478 aa0.95□□□□□ -2.26
CDC39YCR093W SPO77Q06134 477 aa0.95□□□□□ -2.26
CDC39YCR093W YDL211CQ12121 372 aa0.95□□□□□ -2.26
CDC39YCR093W YPL119C-AQ3E751 87 aa0.95□□□□□ -2.26
CDC39YCR093W PUT1P09368 476 aa0.94□□□□□ -2.26
CDC39YCR093W TIP20P33891 701 aa0.94□□□□□ -2.26
CDC39YCR093W YAP3P38749 330 aa0.94□□□□□ -2.26
CDC39YCR093W CHL4P38907 458 aa0.94□□□□□ -2.26
CDC39YCR093W VTC1P40046 129 aaRIP-Chip data0.94□□□□□ -2.26not detected
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms