RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CASP10Q92851 521 aa12.3□□□□□ -0.44
RFFL-204ENST00000414419 BICD1Q96G01 975 aa12.3□□□□□ -0.44
RFFL-204ENST00000414419 REEP2Q9BRK0 252 aa12.3□□□□□ -0.44
RFFL-204ENST00000414419 CCDC94Q9BW85 323 aaPredicted RBP12.3□□□□□ -0.44
RFFL-204ENST00000414419 TARS2Q9BW92 718 aaKnown RBP12.3□□□□□ -0.44
RFFL-204ENST00000414419 EMILIN2Q9BXX0 1053 aa12.3□□□□□ -0.44
RFFL-204ENST00000414419 PARVGQ9HBI0 331 aa12.3□□□□□ -0.44
RFFL-204ENST00000414419 MRPL17Q9NRX2 175 aaKnown RBP12.3□□□□□ -0.44
RFFL-204ENST00000414419 TOPORSQ9NS56 1045 aaPredicted RBP12.3□□□□□ -0.44
RFFL-204ENST00000414419 BLOC1S4Q9NUP1 217 aa12.3□□□□□ -0.44
RFFL-204ENST00000414419 CLEC1BQ9P126 229 aa12.3□□□□□ -0.44
RFFL-204ENST00000414419 STK17AQ9UEE5 414 aa12.3□□□□□ -0.44
RFFL-204ENST00000414419 IRAK3Q9Y616 596 aa12.3□□□□□ -0.44
RFFL-204ENST00000414419 TADA2AO75478 443 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 GLP2RO95838 553 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 SOD2P04179 222 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 URODP06132 367 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 ZSCAN22P10073 491 aaPredicted RBP12.29□□□□□ -0.44
RFFL-204ENST00000414419 SCP2P22307 547 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 NASPP49321 788 aaPredicted RBP12.29□□□□□ -0.44
RFFL-204ENST00000414419 OSTNP61366 133 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 COASYQ13057 564 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 TUSC3Q13454 348 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 SMAD2Q15796 467 aaKnown RBP12.29□□□□□ -0.44
RFFL-204ENST00000414419 MPZL3Q6UWV2 235 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 TMEM184AQ6ZMB5 413 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 CCDC73Q6ZRK6 1079 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 USP49Q70CQ1 688 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 PPFIBP1Q86W92 1011 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 TMEM161BQ8NDZ6 487 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 GSTCDQ8NEC7 633 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 AUTS2Q8WXX7 1259 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 MSLNLQ96KJ4 702 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 POP1Q99575 1024 aaKnown RBP12.29□□□□□ -0.44
RFFL-204ENST00000414419 TFIP11Q9UBB9 837 aaKnown RBP12.29□□□□□ -0.44
RFFL-204ENST00000414419 PRKAG3Q9UGI9 489 aa12.29□□□□□ -0.44
RFFL-204ENST00000414419 MORC2Q9Y6X9 1032 aaPredicted RBP12.29□□□□□ -0.44
RFFL-204ENST00000414419 BDP1A6H8Y1 2624 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 K7ENM7 598 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 C2CD2LO14523 706 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 SPTLC2O15270 562 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 TRAK2O60296 914 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 CLASP2O75122 1294 aaKnown RBP12.28□□□□□ -0.44
RFFL-204ENST00000414419 F13A1P00488 732 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 MAPTP10636 758 aaKnown RBP12.28□□□□□ -0.44
RFFL-204ENST00000414419 MCF2P10911 925 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 HARSP12081 509 aaKnown RBP12.28□□□□□ -0.44
RFFL-204ENST00000414419 HOXB8P17481 243 aaPredicted RBP12.28□□□□□ -0.44
RFFL-204ENST00000414419 KLRC2P26717 231 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 ABCD1P33897 745 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 GRM5P41594 1212 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 STAT6P42226 847 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 GLUD2P49448 558 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 NCKAP1LP55160 1127 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 RBM10P98175 930 aaKnown RBP12.28□□□□□ -0.44
RFFL-204ENST00000414419 HSP90AA2PQ14568 343 aaPredicted RBP12.28□□□□□ -0.44
RFFL-204ENST00000414419 FOXD4L6Q3SYB3 417 aaPredicted RBP12.28□□□□□ -0.44
RFFL-204ENST00000414419 TPRNQ4KMQ1 711 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 ANKRD54Q6NXT1 300 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 FOXD4L3Q6VB84 417 aaPredicted RBP12.28□□□□□ -0.44
RFFL-204ENST00000414419 SV2BQ7L1I2 683 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 TAS1R3Q7RTX0 852 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 HAUS6Q7Z4H7 955 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 GJD3Q8N144 294 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 LINC00301Q8NCQ3 95 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 SMRP1Q8NCR6 262 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 ACAP3Q96P50 834 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 HERC2P3Q9BVR0 1158 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 CDT1Q9H211 546 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 MARCH5Q9NX47 278 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 ANKFY1Q9P2R3 1169 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 ADAM28Q9UKQ2 775 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 HCFC2Q9Y5Z7 792 aa12.28□□□□□ -0.44
RFFL-204ENST00000414419 SPTBN5Q9NRC6 3674 aaKnown RBP12.27□□□□□ -0.44
RFFL-204ENST00000414419 CASTOR2A6NHX0 329 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 CLDN3O15551 220 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 PPP6R2O75170 966 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 TOM1L1O75674 476 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 LIG4P49917 911 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.45
RFFL-204ENST00000414419 PTPN14Q15678 1187 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 USP41Q3LFD5 358 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 CES5AQ6NT32 575 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 ZPBP2Q6X784 338 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 DYMQ7RTS9 669 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 ADHFE1Q8IWW8 467 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 VN1R2Q8NFZ6 395 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 LRRC15Q8TF66 581 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 RABGGTAQ92696 567 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 APOL5Q9BWW9 433 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 VN1R3Q9BXE9 311 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 PANK2Q9BZ23 570 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 PTPRHQ9HD43 1115 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 SLC38A7Q9NVC3 462 aa12.27□□□□□ -0.45
RFFL-204ENST00000414419 SF3B1O75533 1304 aaKnown RBP eCLIP12.27□□□□□ -0.455e-6■■■■■ 88.1
RFFL-204ENST00000414419 MTCL1Q9Y4B5 1905 aaKnown RBP12.27□□□□□ -0.45
RFFL-204ENST00000414419 PDCD11Q14690 1871 aaKnown RBP12.26□□□□□ -0.45
RFFL-204ENST00000414419 F8W810 466 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 PTGESO14684 152 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms