RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ORAI2Q96SN7 254 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 PCGF6Q9BYE7 350 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 DNAI1Q9UI46 699 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 TMPRSS11EQ9UL52 423 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 FZD1Q9UP38 647 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 ATP8A1Q9Y2Q0 1164 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 ZNF644Q9H582 1327 aaPredicted RBP5.89□□□□□ -1.47
CLK1-203ENST00000409769 TSPOAP1O95153 1857 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 DAPK1P53355 1430 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 CD109Q6YHK3 1445 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 FANCAO15360 1455 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 SYCP2Q9BX26 1530 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 MAST1Q9Y2H9 1570 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 ADGBQ8N7X0 1667 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 ST20-MTHFSA0A0A6YYL1 179 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 PRSS38A1L453 326 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 RPS6KA4O75676 772 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 RECQL4O94761 1208 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 AMPD3Q01432 767 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 LY6G5CQ5SRR4 150 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 RHOUQ7L0Q8 258 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 DDX42Q86XP3 938 aaKnown RBP eCLIP5.88□□□□□ -1.47
CLK1-203ENST00000409769 SLC41A1Q8IVJ1 513 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 CDYL2Q8N8U2 506 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 FERMT2Q96AC1 680 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 HIST1H2AHQ96KK5 128 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 UIMC1Q96RL1 719 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 HIST1H2AJQ99878 128 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 PDCD2LQ9BRP1 358 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 FAM126AQ9BYI3 521 aaPredicted RBP5.88□□□□□ -1.47
CLK1-203ENST00000409769 MS4A5Q9H3V2 200 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 PPP2R3BQ9Y5P8 575 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 NEO1Q92859 1461 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 SHANK2Q9UPX8 1470 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 GCC2Q8IWJ2 1684 aa5.88□□□□□ -1.47
CLK1-203ENST00000409769 A0A0A6YYK5 440 aaPredicted RBP5.87□□□□□ -1.47
CLK1-203ENST00000409769 TRIM24O15164 1050 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 SEC24DO94855 1032 aaPredicted RBP5.87□□□□□ -1.47
CLK1-203ENST00000409769 GCP02774 474 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 ITGB1P05556 798 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 KRTAP1-1Q07627 177 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 FAM50AQ14320 339 aaKnown RBP5.87□□□□□ -1.47
CLK1-203ENST00000409769 PDCD1Q15116 288 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 PTPAQ15257 358 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 FSCN1Q16658 493 aaKnown RBP5.87□□□□□ -1.47
CLK1-203ENST00000409769 EFCAB2Q5VUJ9 269 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 LHFPL2Q6ZUX7 228 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 HDGFL2Q7Z4V5 671 aaPredicted RBP5.87□□□□□ -1.47
CLK1-203ENST00000409769 LYSMD2Q8IV50 215 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 ELOA2Q8IYF1 753 aaPredicted RBP5.87□□□□□ -1.47
CLK1-203ENST00000409769 UNC5BQ8IZJ1 945 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 FAM177A1Q8N128 213 aaPredicted RBP5.87□□□□□ -1.47
CLK1-203ENST00000409769 ATL2Q8NHH9 583 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 ZCRB1Q8TBF4 217 aaKnown RBP5.87□□□□□ -1.47
CLK1-203ENST00000409769 SOX7Q9BT81 388 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 TOPORSQ9NS56 1045 aaPredicted RBP5.87□□□□□ -1.47
CLK1-203ENST00000409769 NCDNQ9UBB6 729 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 PCDHB6Q9Y5E3 794 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 AKNAQ7Z591 1439 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 ADGRL2O95490 1459 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 CCDC141Q6ZP82 1450 aa5.87□□□□□ -1.47
CLK1-203ENST00000409769 RICTORQ6R327 1708 aa5.86□□□□□ -1.47
CLK1-203ENST00000409769 KDM5CP41229 1560 aa5.86□□□□□ -1.47
CLK1-203ENST00000409769 ADGRL1O94910 1474 aa5.86□□□□□ -1.47
CLK1-203ENST00000409769 ROCK1Q13464 1354 aa5.86□□□□□ -1.47
CLK1-203ENST00000409769 LCHNA4D1U4 455 aa5.86□□□□□ -1.47
CLK1-203ENST00000409769 APOL3O95236 402 aa5.86□□□□□ -1.47
CLK1-203ENST00000409769 C1QL3Q5VWW1 255 aa5.86□□□□□ -1.47
CLK1-203ENST00000409769 IQSEC1Q6DN90 963 aa5.86□□□□□ -1.47
CLK1-203ENST00000409769 DPY19L2P1Q6NXN4 242 aa5.86□□□□□ -1.47
CLK1-203ENST00000409769 LRRC55Q6ZSA7 311 aa5.86□□□□□ -1.47
CLK1-203ENST00000409769 MB21D1Q8N884 522 aa5.86□□□□□ -1.47
CLK1-203ENST00000409769 LMBR1Q8WVP7 490 aa5.86□□□□□ -1.47
CLK1-203ENST00000409769 NOL10Q9BSC4 688 aaKnown RBP5.86□□□□□ -1.47
CLK1-203ENST00000409769 PUS7LQ9H0K6 701 aaKnown RBP5.86□□□□□ -1.47
CLK1-203ENST00000409769 PLXNC1O60486 1568 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 FRMPD1Q5SYB0 1578 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 INO80Q9ULG1 1556 aaPredicted RBP5.85□□□□□ -1.47
CLK1-203ENST00000409769 ZFYVE16Q7Z3T8 1539 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 TEX14Q8IWB6 1497 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 HFM1A2PYH4 1435 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 TRAPPC8Q9Y2L5 1435 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 NRP2O60462 931 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 FAM20BO75063 409 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 ABHD16AO95870 558 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 HNRNPLP14866 589 aaKnown RBP eCLIP5.85□□□□□ -1.47
CLK1-203ENST00000409769 ENPP1P22413 925 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 ADRA1BP35368 520 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 WNT3AP56704 352 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 TMPRSS15P98073 1019 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 COL10A1Q03692 680 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 KCNV1Q6PIU1 500 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 GLB1L3Q8NCI6 653 aaPredicted RBP5.85□□□□□ -1.47
CLK1-203ENST00000409769 RAX2Q96IS3 184 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 PCDH12Q9NPG4 1184 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 PRSS50Q9UI38 385 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 PACSIN3Q9UKS6 424 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 COL4A3BPQ9Y5P4 624 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 KIDINS220Q9ULH0 1771 aa5.85□□□□□ -1.47
CLK1-203ENST00000409769 C9orf84Q5VXU9 1444 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms