RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 MARCH5Q9NX47 278 aa30.32■■■□□ 2.44
ATPAF1-201ENST00000329231 THP07101 528 aa30.31■■■□□ 2.44
ATPAF1-201ENST00000329231 ZSCAN22P10073 491 aaPredicted RBP30.31■■■□□ 2.44
ATPAF1-201ENST00000329231 MAPTP10636 758 aaKnown RBP30.31■■■□□ 2.44
ATPAF1-201ENST00000329231 RRAGBQ5VZM2 374 aa30.31■■■□□ 2.44
ATPAF1-201ENST00000329231 LINC00301Q8NCQ3 95 aa30.31■■■□□ 2.44
ATPAF1-201ENST00000329231 AUTS2Q8WXX7 1259 aa30.31■■■□□ 2.44
ATPAF1-201ENST00000329231 TCHPQ9BT92 498 aa30.31■■■□□ 2.44
ATPAF1-201ENST00000329231 CDT1Q9H211 546 aa30.31■■■□□ 2.44
ATPAF1-201ENST00000329231 PARVGQ9HBI0 331 aa30.31■■■□□ 2.44
ATPAF1-201ENST00000329231 SCP2P22307 547 aa30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 NCKAP1LP55160 1127 aa30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 RBM10P98175 930 aaKnown RBP30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 TUSC3Q13454 348 aa30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 SMAD2Q15796 467 aaKnown RBP30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 FOXD4L5Q5VV16 416 aaPredicted RBP30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 MYCT1Q8N699 235 aa30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 SPRYD3Q8NCJ5 442 aa30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 SMRP1Q8NCR6 262 aa30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 FOXD4L4Q8WXT5 416 aaPredicted RBP30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 CCDC94Q9BW85 323 aaPredicted RBP30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 PRKAG3Q9UGI9 489 aa30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 TDRD15B5MCY1 1934 aaKnown RBP30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 NCOR1O75376 2440 aa30.3■■■□□ 2.44
ATPAF1-201ENST00000329231 PTGESO14684 152 aa30.29■■■□□ 2.44
ATPAF1-201ENST00000329231 CLASP2O75122 1294 aaKnown RBP30.29■■■□□ 2.44
ATPAF1-201ENST00000329231 TBCAO75347 108 aaKnown RBP30.29■■■□□ 2.44
ATPAF1-201ENST00000329231 SOD2P04179 222 aa30.29■■■□□ 2.44
ATPAF1-201ENST00000329231 MCF2P10911 925 aa30.29■■■□□ 2.44
ATPAF1-201ENST00000329231 GRM5P41594 1212 aa30.29■■■□□ 2.44
ATPAF1-201ENST00000329231 ZNF131P52739 623 aa30.29■■■□□ 2.44
ATPAF1-201ENST00000329231 PTPN14Q15678 1187 aa30.29■■■□□ 2.44
ATPAF1-201ENST00000329231 LLGL2Q6P1M3 1020 aa30.29■■■□□ 2.44
ATPAF1-201ENST00000329231 MPZL3Q6UWV2 235 aa30.29■■■□□ 2.44
ATPAF1-201ENST00000329231 CASP10Q92851 521 aa30.29■■■□□ 2.44
ATPAF1-201ENST00000329231 KCNN1Q92952 543 aa30.29■■■□□ 2.44
ATPAF1-201ENST00000329231 TFIP11Q9UBB9 837 aaKnown RBP30.29■■■□□ 2.44
ATPAF1-201ENST00000329231 SPTLC2O15270 562 aa30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 TOM1L1O75674 476 aa30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 F13A1P00488 732 aa30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 PROZP22891 400 aa30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 YARSP54577 528 aaKnown RBP30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 CCDC73Q6ZRK6 1079 aa30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 HAUS6Q7Z4H7 955 aa30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 ZBTB33Q86T24 672 aa30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 HERC2P3Q9BVR0 1158 aa30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 MRPL17Q9NRX2 175 aaKnown RBP30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 TOPORSQ9NS56 1045 aaPredicted RBP30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 SSX2IPQ9Y2D8 614 aa30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 HCFC2Q9Y5Z7 792 aa30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 MYH11P35749 1972 aa30.28■■■□□ 2.44
ATPAF1-201ENST00000329231 PPP6R2O75170 966 aa30.27■■■□□ 2.44
ATPAF1-201ENST00000329231 YEATS4O95619 227 aa30.27■■■□□ 2.44
ATPAF1-201ENST00000329231 BRD1O95696 1058 aa30.27■■■□□ 2.44
ATPAF1-201ENST00000329231 URODP06132 367 aa30.27■■■□□ 2.44
ATPAF1-201ENST00000329231 ANKRD54Q6NXT1 300 aa30.27■■■□□ 2.44
ATPAF1-201ENST00000329231 ZPBP2Q6X784 338 aa30.27■■■□□ 2.44
ATPAF1-201ENST00000329231 EMILIN2Q9BXX0 1053 aa30.27■■■□□ 2.44
ATPAF1-201ENST00000329231 ZHX3Q9H4I2 956 aa30.27■■■□□ 2.44
ATPAF1-201ENST00000329231 ABLIM1O14639 778 aa30.26■■■□□ 2.43
ATPAF1-201ENST00000329231 TRAK2O60296 914 aa30.26■■■□□ 2.43
ATPAF1-201ENST00000329231 EFEMP2O95967 443 aa30.26■■■□□ 2.43
ATPAF1-201ENST00000329231 HOXB8P17481 243 aaPredicted RBP30.26■■■□□ 2.43
ATPAF1-201ENST00000329231 SV2BQ7L1I2 683 aa30.26■■■□□ 2.43
ATPAF1-201ENST00000329231 RNF168Q8IYW5 571 aaPredicted RBP30.26■■■□□ 2.43
ATPAF1-201ENST00000329231 GJD3Q8N144 294 aa30.26■■■□□ 2.43
ATPAF1-201ENST00000329231 CEP120Q8N960 986 aa30.26■■■□□ 2.43
ATPAF1-201ENST00000329231 ADAM28Q9UKQ2 775 aa30.26■■■□□ 2.43
ATPAF1-201ENST00000329231 CASTOR2A6NHX0 329 aa30.25■■■□□ 2.43
ATPAF1-201ENST00000329231 F8W810 466 aa30.25■■■□□ 2.43
ATPAF1-201ENST00000329231 K7ENM7 598 aa30.25■■■□□ 2.43
ATPAF1-201ENST00000329231 SSTR3P32745 418 aaPredicted RBP30.25■■■□□ 2.43
ATPAF1-201ENST00000329231 ABCD1P33897 745 aa30.25■■■□□ 2.43
ATPAF1-201ENST00000329231 HSP90AA2PQ14568 343 aaPredicted RBP30.25■■■□□ 2.43
ATPAF1-201ENST00000329231 PPFIBP1Q86W92 1011 aa30.25■■■□□ 2.43
ATPAF1-201ENST00000329231 ADHFE1Q8IWW8 467 aa30.25■■■□□ 2.43
ATPAF1-201ENST00000329231 BICD1Q96G01 975 aa30.25■■■□□ 2.43
ATPAF1-201ENST00000329231 ACAP3Q96P50 834 aa30.25■■■□□ 2.43
ATPAF1-201ENST00000329231 CXCL16Q9H2A7 254 aa30.25■■■□□ 2.43
ATPAF1-201ENST00000329231 ANKFY1Q9P2R3 1169 aa30.25■■■□□ 2.43
ATPAF1-201ENST00000329231 LILRB3O75022 631 aa30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 TADA2AO75478 443 aa30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 STAT6P42226 847 aa30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 GLUD2P49448 558 aa30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 OSTNP61366 133 aa30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 ZP2Q05996 745 aa30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 NOLC1Q14978 699 aaKnown RBP eCLIP30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 NAB2Q15742 525 aa30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 KIAA1841Q6NSI8 718 aa30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 FUT10Q6P4F1 479 aa30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 TAS1R1Q7RTX1 841 aa30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 RABGGTAQ92696 567 aa30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 ZBTB45Q96K62 511 aaPredicted RBP30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 POP1Q99575 1024 aaKnown RBP30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 TBX20Q9UMR3 447 aa30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 USP15Q9Y4E8 981 aaPredicted RBP30.24■■■□□ 2.43
ATPAF1-201ENST00000329231 CLDN3O15551 220 aa30.23■■■□□ 2.43
ATPAF1-201ENST00000329231 HARSP12081 509 aaKnown RBP30.23■■■□□ 2.43
ATPAF1-201ENST00000329231 TPRNQ4KMQ1 711 aa30.23■■■□□ 2.43
ATPAF1-201ENST00000329231 ATL3Q6DD88 541 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms