RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A ATG15P25641 520 aa13.72□□□□□ -0.21
TRN1tP(UGG)A KRE6P32486 720 aa13.72□□□□□ -0.21
TRN1tP(UGG)A AAD14P42884 376 aa13.72□□□□□ -0.21
TRN1tP(UGG)A LOH1P47055 219 aa13.72□□□□□ -0.21
TRN1tP(UGG)A YJR120WP47157 116 aa13.72□□□□□ -0.21
TRN1tP(UGG)A ACS2P52910 683 aaKnown RBP13.72□□□□□ -0.21
TRN1tP(UGG)A SCY1P53009 804 aa13.72□□□□□ -0.21
TRN1tP(UGG)A RCE1Q03530 315 aa13.72□□□□□ -0.21
TRN1tP(UGG)A NMA1Q06178 401 aaKnown RBP13.72□□□□□ -0.21
TRN1tP(UGG)A TIR4Q12218 487 aaPredicted RBP13.72□□□□□ -0.21
TRN1tP(UGG)A CDC36P06100 191 aaPredicted RBP13.71□□□□□ -0.21
TRN1tP(UGG)A ADK1P07170 222 aaKnown RBP13.71□□□□□ -0.21
TRN1tP(UGG)A MRPS5P33759 307 aa13.71□□□□□ -0.21
TRN1tP(UGG)A SEN34P39707 275 aa13.71□□□□□ -0.21
TRN1tP(UGG)A LYS20P48570 428 aaKnown RBP13.71□□□□□ -0.21
TRN1tP(UGG)A IMO32P53219 342 aa13.71□□□□□ -0.21
TRN1tP(UGG)A GPN3Q06543 272 aa13.71□□□□□ -0.21
TRN1tP(UGG)A LUC7Q07508 261 aaPredicted RBP13.71□□□□□ -0.21
TRN1tP(UGG)A LYS21Q12122 440 aaKnown RBP13.71□□□□□ -0.21
TRN1tP(UGG)A IZH2Q12442 317 aa13.71□□□□□ -0.21
TRN1tP(UGG)A SOD2P00447 233 aa13.7□□□□□ -0.22
TRN1tP(UGG)A CLB2P24869 491 aa13.7□□□□□ -0.22
TRN1tP(UGG)A PAU2P32612 120 aa13.7□□□□□ -0.22
TRN1tP(UGG)A PPG1P32838 368 aa13.7□□□□□ -0.22
TRN1tP(UGG)A MOB2P43563 287 aa13.7□□□□□ -0.22
TRN1tP(UGG)A TNA1P53322 534 aa13.7□□□□□ -0.22
TRN1tP(UGG)A PXR1P53335 271 aaPredicted RBP13.7□□□□□ -0.22
TRN1tP(UGG)A YLR152CP54072 576 aa13.7□□□□□ -0.22
TRN1tP(UGG)A SSK1Q07084 712 aa13.7□□□□□ -0.22
TRN1tP(UGG)A RPL43AP0CX25 92 aaKnown RBP13.69□□□□□ -0.22
TRN1tP(UGG)A RPL43BP0CX26 92 aa13.69□□□□□ -0.22
TRN1tP(UGG)A SHE2P36068 246 aaKnown RBP RIP-Chip data13.69□□□□□ -0.22not detected
TRN1tP(UGG)A FRM2P37261 193 aa13.69□□□□□ -0.22
TRN1tP(UGG)A YBR096WP38256 230 aa13.69□□□□□ -0.22
TRN1tP(UGG)A YBR137WP38276 179 aa13.69□□□□□ -0.22
TRN1tP(UGG)A SDS24P38314 527 aa13.69□□□□□ -0.22
TRN1tP(UGG)A TOK1P40310 691 aa13.69□□□□□ -0.22
TRN1tP(UGG)A DIG2Q03373 323 aaKnown RBP13.69□□□□□ -0.22
TRN1tP(UGG)A ASR1Q06834 288 aa13.69□□□□□ -0.22
TRN1tP(UGG)A THI72Q08579 599 aa13.69□□□□□ -0.22
TRN1tP(UGG)A DCP1Q12517 231 aaPredicted RBP13.69□□□□□ -0.22
TRN1tP(UGG)A YER084WP40057 128 aa13.68□□□□□ -0.22
TRN1tP(UGG)A YJL055WP47044 245 aa13.68□□□□□ -0.22
TRN1tP(UGG)A YGL204CP53089 101 aa13.68□□□□□ -0.22
TRN1tP(UGG)A YNL092WP53934 400 aa13.68□□□□□ -0.22
TRN1tP(UGG)A RPL6AQ02326 176 aaKnown RBP13.68□□□□□ -0.22
TRN1tP(UGG)A MSS11Q03825 758 aa13.68□□□□□ -0.22
TRN1tP(UGG)A PEX27Q08580 376 aa13.68□□□□□ -0.22
TRN1tP(UGG)A RCN2Q12044 265 aa13.68□□□□□ -0.22
TRN1tP(UGG)A SUS1Q6WNK7 96 aa13.68□□□□□ -0.22
TRN1tP(UGG)A QCR7P00128 127 aa13.67□□□□□ -0.22
TRN1tP(UGG)A GCN4P03069 281 aa13.67□□□□□ -0.22
TRN1tP(UGG)A PUG1P40100 303 aa13.67□□□□□ -0.22
TRN1tP(UGG)A DLS1P40366 167 aa13.67□□□□□ -0.22
TRN1tP(UGG)A ATG18P43601 500 aa13.67□□□□□ -0.22
TRN1tP(UGG)A DOC1P53068 250 aa13.67□□□□□ -0.22
TRN1tP(UGG)A YGR054WP53235 642 aaKnown RBP13.67□□□□□ -0.22
TRN1tP(UGG)A MTM1P53320 366 aa13.67□□□□□ -0.22
TRN1tP(UGG)A AAH1P53909 347 aa13.67□□□□□ -0.22
TRN1tP(UGG)A TDA1Q03533 586 aa13.67□□□□□ -0.22
TRN1tP(UGG)A COX5BP00425 151 aa13.66□□□□□ -0.22
TRN1tP(UGG)A MES1P00958 751 aaKnown RBP13.66□□□□□ -0.22
TRN1tP(UGG)A RPS18AP0CX55 146 aaKnown RBP13.66□□□□□ -0.22
TRN1tP(UGG)A RPS18BP0CX56 146 aaPredicted RBP13.66□□□□□ -0.22
TRN1tP(UGG)A RPL35AP0CX84 120 aaKnown RBP13.66□□□□□ -0.22
TRN1tP(UGG)A RPL35BP0CX85 120 aaKnown RBP13.66□□□□□ -0.22
TRN1tP(UGG)A SFK1P35735 353 aa13.66□□□□□ -0.22
TRN1tP(UGG)A RTT105P40063 208 aa13.66□□□□□ -0.22
TRN1tP(UGG)A RSM23Q01163 450 aa13.66□□□□□ -0.22
TRN1tP(UGG)A WTM2Q12206 467 aa13.66□□□□□ -0.22
TRN1tP(UGG)A NAM2P11325 894 aa13.65□□□□□ -0.22
TRN1tP(UGG)A RPI1P23250 407 aaKnown RBP13.65□□□□□ -0.22
TRN1tP(UGG)A TMA19P35691 167 aaKnown RBP13.65□□□□□ -0.22
TRN1tP(UGG)A YJL016WP47072 561 aa13.65□□□□□ -0.22
TRN1tP(UGG)A CIK1Q01649 594 aa13.65□□□□□ -0.22
TRN1tP(UGG)A NGL1Q08213 363 aaKnown RBP13.65□□□□□ -0.22
TRN1tP(UGG)A SOG2Q08817 791 aa13.65□□□□□ -0.22
TRN1tP(UGG)A SSA3P09435 649 aaKnown RBP13.64□□□□□ -0.23
TRN1tP(UGG)A ERG24P32462 438 aaKnown RBP13.64□□□□□ -0.23
TRN1tP(UGG)A ZRT3P34240 503 aa13.64□□□□□ -0.23
TRN1tP(UGG)A CCZ1P38273 704 aa13.64□□□□□ -0.23
TRN1tP(UGG)A YFL051CP43552 160 aa13.64□□□□□ -0.23
TRN1tP(UGG)A CTK2P46962 323 aa13.64□□□□□ -0.23
TRN1tP(UGG)A SIP18P50263 79 aa13.64□□□□□ -0.23
TRN1tP(UGG)A HAS1Q03532 505 aaKnown RBP13.64□□□□□ -0.23
TRN1tP(UGG)A API2Q04413 109 aa13.64□□□□□ -0.23
TRN1tP(UGG)A MRT4P33201 236 aaKnown RBP13.63□□□□□ -0.23
TRN1tP(UGG)A MKS1P34072 584 aa13.63□□□□□ -0.23
TRN1tP(UGG)A APL3P38065 1025 aa13.63□□□□□ -0.23
TRN1tP(UGG)A TAT1P38085 619 aa13.63□□□□□ -0.23
TRN1tP(UGG)A SSH1P38353 490 aaKnown RBP13.63□□□□□ -0.23
TRN1tP(UGG)A ATF1P40353 525 aa13.63□□□□□ -0.23
TRN1tP(UGG)A CWC23P52868 283 aaPredicted RBP13.63□□□□□ -0.23
TRN1tP(UGG)A YIP4P53093 235 aa13.63□□□□□ -0.23
TRN1tP(UGG)A NRK1P53915 240 aa13.63□□□□□ -0.23
TRN1tP(UGG)A FIT3Q08907 204 aa13.63□□□□□ -0.23
TRN1tP(UGG)A RPN13O13563 156 aa13.62□□□□□ -0.23
TRN1tP(UGG)A HIS3P06633 220 aa13.62□□□□□ -0.23
TRN1tP(UGG)A DSF1P0CX08 502 aa13.62□□□□□ -0.23
TRN1tP(UGG)A YNR073CP0CX09 502 aa13.62□□□□□ -0.23
Retrieved 100 of 5,963 RNA–protein pairs in 189.8 ms