RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO1, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO1	YPL232W	NAM2	P11325	894 aa		4.23	□□□□□ -1.73
SSO1	YPL232W	TAT1	P38085	619 aa		4.23	□□□□□ -1.73
SSO1	YPL232W	RMD6	P39975	231 aa		4.23	□□□□□ -1.73
SSO1	YPL232W	STB1	P42845	420 aa		4.23	□□□□□ -1.73
SSO1	YPL232W	RMD9	P53140	646 aa	Known RBP	4.23	□□□□□ -1.73
SSO1	YPL232W	DIG2	Q03373	323 aa	Known RBP	4.23	□□□□□ -1.73
SSO1	YPL232W	YDR514C	Q04408	483 aa		4.23	□□□□□ -1.73
SSO1	YPL232W	YPR098C	Q06089	161 aa		4.23	□□□□□ -1.73
SSO1	YPL232W	MRPL51	Q06090	140 aa	Predicted RBP	4.23	□□□□□ -1.73
SSO1	YPL232W	SPC3	Q12133	184 aa		4.23	□□□□□ -1.73
SSO1	YPL232W	YMR105W-A	Q8TGS8	64 aa		4.23	□□□□□ -1.73
SSO1	YPL232W	TDH2	P00358	332 aa	Known RBP	4.22	□□□□□ -1.73
SSO1	YPL232W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SSO1	YPL232W	CMK2	P22517	447 aa		4.22	□□□□□ -1.73
SSO1	YPL232W	CPR2	P23285	205 aa		4.22	□□□□□ -1.73
SSO1	YPL232W	KRR1	P25586	316 aa	Predicted RBP	4.22	□□□□□ -1.73
SSO1	YPL232W	DEG1	P31115	442 aa	Known RBP	4.22	□□□□□ -1.73
SSO1	YPL232W	PEX32	P38292	413 aa		4.22	□□□□□ -1.73
SSO1	YPL232W	ARC40	P38328	384 aa	Known RBP	4.22	□□□□□ -1.73
SSO1	YPL232W	YHR218W	P38899	603 aa		4.22	□□□□□ -1.73
SSO1	YPL232W	FIP1	P45976	327 aa		4.22	□□□□□ -1.73
SSO1	YPL232W	YGL101W	P53144	215 aa		4.22	□□□□□ -1.73
SSO1	YPL232W	RNH201	P53942	307 aa		4.22	□□□□□ -1.73
SSO1	YPL232W	SVL3	Q03088	825 aa	Known RBP	4.22	□□□□□ -1.73
SSO1	YPL232W	NGL2	Q03264	515 aa	Known RBP	4.22	□□□□□ -1.73
SSO1	YPL232W	UGO1	Q03327	502 aa		4.22	□□□□□ -1.73
SSO1	YPL232W	AIM36	Q03798	255 aa		4.22	□□□□□ -1.73
SSO1	YPL232W	BRE4	Q07660	1125 aa		4.22	□□□□□ -1.73
SSO1	YPL232W	MHF2	Q3E829	80 aa		4.22	□□□□□ -1.73
SSO1	YPL232W	SIR2	P06700	562 aa		4.21	□□□□□ -1.74
SSO1	YPL232W	ATP7	P30902	174 aa		4.21	□□□□□ -1.74
SSO1	YPL232W	SRP102	P36057	244 aa	Predicted RBP	4.21	□□□□□ -1.74
SSO1	YPL232W	YKR015C	P36111	568 aa		4.21	□□□□□ -1.74
SSO1	YPL232W	ALG14	P38242	237 aa		4.21	□□□□□ -1.74
SSO1	YPL232W	CIN2	P46670	268 aa		4.21	□□□□□ -1.74
SSO1	YPL232W	GON7	P46984	123 aa		4.21	□□□□□ -1.74
SSO1	YPL232W	AVT4	P50944	713 aa		4.21	□□□□□ -1.74
SSO1	YPL232W	YNL033W	P53964	284 aa		4.21	□□□□□ -1.74
SSO1	YPL232W	YNL019C	P53975	284 aa		4.21	□□□□□ -1.74
SSO1	YPL232W	RNT1	Q02555	471 aa		4.21	□□□□□ -1.74
SSO1	YPL232W	GPI17	Q04080	534 aa		4.21	□□□□□ -1.74
SSO1	YPL232W	HFD1	Q04458	532 aa		4.21	□□□□□ -1.74
SSO1	YPL232W	NNT1	Q05874	261 aa		4.21	□□□□□ -1.74
SSO1	YPL232W	THP3	Q12049	470 aa	Known RBP	4.21	□□□□□ -1.74
SSO1	YPL232W	STE18	P18852	110 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	PEX3	P28795	441 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	REC114	P32841	428 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	SOR1	P35497	357 aa	Known RBP	4.2	□□□□□ -1.74
SSO1	YPL232W	MRP8	P35719	219 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	CUE2	P36075	443 aa	Known RBP	4.2	□□□□□ -1.74
SSO1	YPL232W	VBA2	P38358	474 aa	Known RBP	4.2	□□□□□ -1.74
SSO1	YPL232W	AIM46	P38885	310 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	DDI1	P40087	428 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	RPA43	P46669	326 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	CTK2	P46962	323 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	MTL1	P53214	551 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	YGR168C	P53293	376 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	RRN9	P53437	365 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	HHT1	P61830	136 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	TY1A-DR2	Q03964	440 aa	Known RBP	4.2	□□□□□ -1.74
SSO1	YPL232W	RRP9	Q06506	573 aa	Known RBP	4.2	□□□□□ -1.74
SSO1	YPL232W	ARR2	Q06597	130 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	GPI11	Q06636	219 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	SOR2	Q07786	357 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	GSH2	Q08220	491 aa		4.2	□□□□□ -1.74
SSO1	YPL232W	RKM1	Q08961	583 aa	Predicted RBP	4.2	□□□□□ -1.74
SSO1	YPL232W	MES1	P00958	751 aa	Known RBP	4.19	□□□□□ -1.74
SSO1	YPL232W	RPS13	P05756	151 aa	Known RBP	4.19	□□□□□ -1.74
SSO1	YPL232W	RPS31	P05759	152 aa	Known RBP	4.19	□□□□□ -1.74
SSO1	YPL232W	SGA1	P08019	549 aa		4.19	□□□□□ -1.74
SSO1	YPL232W	PUT3	P25502	979 aa	Predicted RBP	4.19	□□□□□ -1.74
SSO1	YPL232W	LTV1	P34078	463 aa		4.19	□□□□□ -1.74
SSO1	YPL232W	XPT1	P47165	209 aa		4.19	□□□□□ -1.74
SSO1	YPL232W	GPI8	P49018	411 aa		4.19	□□□□□ -1.74
SSO1	YPL232W	SAM37	P50110	327 aa		4.19	□□□□□ -1.74
SSO1	YPL232W	YGL114W	P53134	725 aa		4.19	□□□□□ -1.74
SSO1	YPL232W	YDR248C	Q03786	193 aa		4.19	□□□□□ -1.74
SSO1	YPL232W	GEP3	Q08622	556 aa		4.19	□□□□□ -1.74
SSO1	YPL232W	NFI1	Q12216	726 aa		4.19	□□□□□ -1.74
SSO1	YPL232W	YDL007C-A	Q2V2Q0	85 aa		4.19	□□□□□ -1.74
SSO1	YPL232W	SAG1	P20840	650 aa		4.18	□□□□□ -1.74
SSO1	YPL232W	MEK1	P24719	497 aa	Predicted RBP	4.18	□□□□□ -1.74
SSO1	YPL232W	RPL5	P26321	297 aa	Known RBP	4.18	□□□□□ -1.74
SSO1	YPL232W	PRE4	P30657	266 aa		4.18	□□□□□ -1.74
SSO1	YPL232W	AUA1	P32450	94 aa		4.18	□□□□□ -1.74
SSO1	YPL232W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SSO1	YPL232W	RTC2	P38279	296 aa		4.18	□□□□□ -1.74
SSO1	YPL232W	RFC3	P38629	340 aa		4.18	□□□□□ -1.74
SSO1	YPL232W	ERP5	P38819	212 aa		4.18	□□□□□ -1.74
SSO1	YPL232W	PUG1	P40100	303 aa		4.18	□□□□□ -1.74
SSO1	YPL232W	ATF1	P40353	525 aa		4.18	□□□□□ -1.74
SSO1	YPL232W	TAF4	P50105	388 aa		4.18	□□□□□ -1.74
SSO1	YPL232W	GET1	P53192	235 aa		4.18	□□□□□ -1.74
SSO1	YPL232W	SPC19	Q03954	165 aa		4.18	□□□□□ -1.74
SSO1	YPL232W	RFU1	Q08003	200 aa		4.18	□□□□□ -1.74
SSO1	YPL232W	SNF6	P18888	332 aa		4.17	□□□□□ -1.74
SSO1	YPL232W	HXT2	P23585	541 aa		4.17	□□□□□ -1.74
SSO1	YPL232W	TOM40	P23644	387 aa	Known RBP	4.17	□□□□□ -1.74
SSO1	YPL232W	RPC82	P32349	654 aa		4.17	□□□□□ -1.74
SSO1	YPL232W	RPC34	P32910	317 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 26 ms