RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W SFH1Q06168 426 aa1.97□□□□□ -2.09
VPS16YPL045W YLR446WQ06204 433 aa1.97□□□□□ -2.09
VPS16YPL045W YER078W-AQ3E7A2 54 aa1.97□□□□□ -2.09
VPS16YPL045W YCL021W-AQ96VH3 125 aa1.97□□□□□ -2.09
VPS16YPL045W CDC33P07260 213 aaKnown RBP1.96□□□□□ -2.09
VPS16YPL045W YPK2P18961 677 aa1.96□□□□□ -2.09
VPS16YPL045W RPB5P20434 215 aa1.96□□□□□ -2.09
VPS16YPL045W PRP18P33411 251 aaPredicted RBP1.96□□□□□ -2.09
VPS16YPL045W ANR2P36090 516 aaPredicted RBP1.96□□□□□ -2.09
VPS16YPL045W SDS24P38314 527 aa1.96□□□□□ -2.09
VPS16YPL045W ATG12P38316 186 aa1.96□□□□□ -2.09
VPS16YPL045W RCK1P38622 512 aa1.96□□□□□ -2.09
VPS16YPL045W NDT80P38830 627 aa1.96□□□□□ -2.09
VPS16YPL045W THO1P40040 218 aaKnown RBP1.96□□□□□ -2.09
VPS16YPL045W YRB2P40517 327 aa1.96□□□□□ -2.09
VPS16YPL045W BNS1P50084 137 aa1.96□□□□□ -2.09
VPS16YPL045W VEL1P53058 206 aa1.96□□□□□ -2.09
VPS16YPL045W TPN1P53099 579 aa1.96□□□□□ -2.09
VPS16YPL045W MAL13P53338 473 aa1.96□□□□□ -2.09
VPS16YPL045W SCS7Q03529 384 aa1.96□□□□□ -2.09
VPS16YPL045W FAR10Q06001 478 aa1.96□□□□□ -2.09
VPS16YPL045W PEX30Q06169 523 aa1.96□□□□□ -2.09
VPS16YPL045W CTR3Q06686 241 aa1.96□□□□□ -2.09
VPS16YPL045W PER33Q12144 273 aa1.96□□□□□ -2.09
VPS16YPL045W ATP16Q12165 160 aa1.96□□□□□ -2.09
VPS16YPL045W NAM2P11325 894 aa1.96□□□□□ -2.1
VPS16YPL045W CBS2P14905 389 aa1.96□□□□□ -2.1
VPS16YPL045W APA2P22108 325 aa1.96□□□□□ -2.1
VPS16YPL045W RNA15P25299 296 aaPredicted RBP1.96□□□□□ -2.1
VPS16YPL045W QRI5P32344 111 aa1.96□□□□□ -2.1
VPS16YPL045W ARC19P33204 171 aaKnown RBP1.96□□□□□ -2.1
VPS16YPL045W CSE2P33308 149 aa1.96□□□□□ -2.1
VPS16YPL045W SDH3P33421 198 aa1.96□□□□□ -2.1
VPS16YPL045W VPS21P36017 210 aaKnown RBP1.96□□□□□ -2.1
VPS16YPL045W CBT1P36038 271 aaPredicted RBP1.96□□□□□ -2.1
VPS16YPL045W YBR241CP38142 488 aa1.96□□□□□ -2.1
VPS16YPL045W LSM12P38828 187 aaKnown RBP1.96□□□□□ -2.1
VPS16YPL045W CHL4P38907 458 aa1.96□□□□□ -2.1
VPS16YPL045W YJR012CP47087 207 aa1.96□□□□□ -2.1
VPS16YPL045W JHD2P47156 728 aaPredicted RBP1.96□□□□□ -2.1
VPS16YPL045W TPC1P53257 314 aa1.96□□□□□ -2.1
VPS16YPL045W EBS1Q03466 884 aaKnown RBP1.96□□□□□ -2.1
VPS16YPL045W YDR209CQ03480 137 aa1.96□□□□□ -2.1
VPS16YPL045W SMD2Q06217 110 aaKnown RBP1.96□□□□□ -2.1
VPS16YPL045W SFM1Q12314 213 aa1.96□□□□□ -2.1
VPS16YPL045W SME1Q12330 94 aaPredicted RBP1.96□□□□□ -2.1
VPS16YPL045W NCB2Q92317 146 aa1.96□□□□□ -2.1
VPS16YPL045W STE18P18852 110 aa1.95□□□□□ -2.1
VPS16YPL045W OSM1P21375 501 aaKnown RBP1.95□□□□□ -2.1
VPS16YPL045W MRPL20P22354 195 aaPredicted RBP1.95□□□□□ -2.1
VPS16YPL045W URA8P38627 578 aaPredicted RBP1.95□□□□□ -2.1
VPS16YPL045W ERG28P40030 148 aa1.95□□□□□ -2.1
VPS16YPL045W YNL208WP40159 199 aaKnown RBP1.95□□□□□ -2.1
VPS16YPL045W RFC4P40339 323 aaKnown RBP1.95□□□□□ -2.1
VPS16YPL045W YRB1P41920 201 aaKnown RBP1.95□□□□□ -2.1
VPS16YPL045W IBA57P47158 497 aa1.95□□□□□ -2.1
VPS16YPL045W CLD1P53264 445 aa1.95□□□□□ -2.1
VPS16YPL045W CRH1P53301 507 aa1.95□□□□□ -2.1
VPS16YPL045W ZRG17P53735 605 aa1.95□□□□□ -2.1
VPS16YPL045W YNL095CP53932 642 aa1.95□□□□□ -2.1
VPS16YPL045W VAC7P53950 1165 aa1.95□□□□□ -2.1
VPS16YPL045W FSH2Q05015 223 aa1.95□□□□□ -2.1
VPS16YPL045W DPP1Q05521 289 aa1.95□□□□□ -2.1
VPS16YPL045W DTD1Q07648 150 aaKnown RBP1.95□□□□□ -2.1
VPS16YPL045W YOR114WQ12219 294 aa1.95□□□□□ -2.1
VPS16YPL045W HMS1Q12398 434 aa1.95□□□□□ -2.1
VPS16YPL045W YMR31P19955 123 aa1.95□□□□□ -2.1
VPS16YPL045W URA10P30402 227 aa1.95□□□□□ -2.1
VPS16YPL045W HOM6P31116 359 aaKnown RBP1.95□□□□□ -2.1
VPS16YPL045W VAB2P40003 282 aa1.95□□□□□ -2.1
VPS16YPL045W DSN1P40568 576 aa1.95□□□□□ -2.1
VPS16YPL045W ATG18P43601 500 aa1.95□□□□□ -2.1
VPS16YPL045W YJR079WP47126 109 aa1.95□□□□□ -2.1
VPS16YPL045W NBP35P52920 328 aa1.95□□□□□ -2.1
VPS16YPL045W TRM44Q02648 567 aaKnown RBP1.95□□□□□ -2.1
VPS16YPL045W RNY1Q02933 434 aaKnown RBP1.95□□□□□ -2.1
VPS16YPL045W GMC1Q04399 608 aa1.95□□□□□ -2.1
VPS16YPL045W MIM1Q08176 113 aa1.95□□□□□ -2.1
VPS16YPL045W SEY1Q99287 776 aa1.95□□□□□ -2.1
VPS16YPL045W BI3Q9ZZW7 517 aa1.95□□□□□ -2.1
VPS16YPL045W LYS2P07702 1392 aa1.95□□□□□ -2.1
VPS16YPL045W RPS3P05750 240 aaKnown RBP1.94□□□□□ -2.1
VPS16YPL045W PET494P07390 489 aaPredicted RBP1.94□□□□□ -2.1
VPS16YPL045W LDS1P31379 325 aa1.94□□□□□ -2.1
VPS16YPL045W YBR062CP38239 180 aa1.94□□□□□ -2.1
VPS16YPL045W SER33P40510 469 aa1.94□□□□□ -2.1
VPS16YPL045W YFR057WP43625 151 aa1.94□□□□□ -2.1
VPS16YPL045W HSH155P49955 971 aaKnown RBP1.94□□□□□ -2.1
VPS16YPL045W YPS5P53057 165 aa1.94□□□□□ -2.1
VPS16YPL045W YMR226CQ05016 267 aaKnown RBP1.94□□□□□ -2.1
VPS16YPL045W LOA1Q06508 300 aa1.94□□□□□ -2.1
VPS16YPL045W MHR1Q06630 226 aa1.94□□□□□ -2.1
VPS16YPL045W ERV2Q12284 196 aa1.94□□□□□ -2.1
VPS16YPL045W JID1Q12350 301 aa1.94□□□□□ -2.1
VPS16YPL045W YKL183C-AQ3E765 70 aa1.94□□□□□ -2.1
VPS16YPL045W LAG2Q92325 660 aa1.94□□□□□ -2.1
VPS16YPL045W DUR1,2P32528 1835 aaKnown RBP1.94□□□□□ -2.1
VPS16YPL045W HKR1P41809 1802 aa1.94□□□□□ -2.1
VPS16YPL045W HHF1P02309 103 aaKnown RBP1.94□□□□□ -2.1
VPS16YPL045W PHO2P07269 559 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms