RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C FMN1Q03778 218 aa3.02□□□□□ -1.93
RPA43YOR340C ECM11Q04110 302 aa3.02□□□□□ -1.93
RPA43YOR340C APC4Q04601 652 aa3.02□□□□□ -1.93
RPA43YOR340C SMA2Q04658 369 aa3.02□□□□□ -1.93
RPA43YOR340C YHC1Q05900 231 aaKnown RBP3.02□□□□□ -1.93
RPA43YOR340C YLR413WQ06689 675 aa3.02□□□□□ -1.93
RPA43YOR340C TPT1Q12272 230 aaKnown RBP3.02□□□□□ -1.93
RPA43YOR340C MEC1P38111 2368 aa3.02□□□□□ -1.93
RPA43YOR340C RNA1P11745 407 aaKnown RBP3.01□□□□□ -1.93
RPA43YOR340C CCA1P21269 546 aa3.01□□□□□ -1.93
RPA43YOR340C CAT2P32796 670 aaKnown RBP3.01□□□□□ -1.93
RPA43YOR340C SUR1P33300 382 aa3.01□□□□□ -1.93
RPA43YOR340C SPT10P35208 640 aa3.01□□□□□ -1.93
RPA43YOR340C CHK1P38147 527 aa3.01□□□□□ -1.93
RPA43YOR340C KRE9P39005 276 aa3.01□□□□□ -1.93
RPA43YOR340C AYR1P40471 297 aa3.01□□□□□ -1.93
RPA43YOR340C HPM1P40481 377 aa3.01□□□□□ -1.93
RPA43YOR340C NCA3P46955 337 aa3.01□□□□□ -1.93
RPA43YOR340C GTO1P48239 356 aa3.01□□□□□ -1.93
RPA43YOR340C USE1P53146 245 aa3.01□□□□□ -1.93
RPA43YOR340C HXT11P54862 567 aa3.01□□□□□ -1.93
RPA43YOR340C RSM10Q03201 203 aa3.01□□□□□ -1.93
RPA43YOR340C MGR3Q04472 501 aa3.01□□□□□ -1.93
RPA43YOR340C SNF8Q12483 233 aa3.01□□□□□ -1.93
RPA43YOR340C TRA1P38811 3744 aa3□□□□□ -1.93
RPA43YOR340C RAS2P01120 322 aaKnown RBP3□□□□□ -1.93
RPA43YOR340C UNG1P12887 359 aa3□□□□□ -1.93
RPA43YOR340C CAP2P13517 287 aa3□□□□□ -1.93
RPA43YOR340C MSS116P15424 664 aaKnown RBP3□□□□□ -1.93
RPA43YOR340C SAG1P20840 650 aa3□□□□□ -1.93
RPA43YOR340C EXG1P23776 448 aaKnown RBP3□□□□□ -1.93
RPA43YOR340C CDC10P25342 322 aaKnown RBP3□□□□□ -1.93
RPA43YOR340C CPR3P25719 182 aa3□□□□□ -1.93
RPA43YOR340C SSO1P32867 290 aa3□□□□□ -1.93
RPA43YOR340C MRPL17P36528 281 aa3□□□□□ -1.93
RPA43YOR340C PRP39P39682 629 aaKnown RBP3□□□□□ -1.93
RPA43YOR340C ICE2P40499 491 aa3□□□□□ -1.93
RPA43YOR340C YIL067CP40514 678 aa3□□□□□ -1.93
RPA43YOR340C SNL1P40548 159 aa3□□□□□ -1.93
RPA43YOR340C YFL067WP43537 175 aa3□□□□□ -1.93
RPA43YOR340C MPA43P53583 542 aaPredicted RBP3□□□□□ -1.93
RPA43YOR340C YPR174CQ06616 221 aaPredicted RBP3□□□□□ -1.93
RPA43YOR340C LDS2Q08218 356 aa3□□□□□ -1.93
RPA43YOR340C HNT3Q08702 217 aa3□□□□□ -1.93
RPA43YOR340C RAX1Q08760 435 aa3□□□□□ -1.93
RPA43YOR340C YPR202WQ08993 238 aa3□□□□□ -1.93
RPA43YOR340C YCL021W-AQ96VH3 125 aa3□□□□□ -1.93
RPA43YOR340C SAS5Q99314 248 aa3□□□□□ -1.93
RPA43YOR340C ATP6P00854 259 aa2.99□□□□□ -1.93
RPA43YOR340C STE7P06784 515 aa2.99□□□□□ -1.93
RPA43YOR340C NAM9P27929 486 aa2.99□□□□□ -1.93
RPA43YOR340C PMT2P31382 759 aa2.99□□□□□ -1.93
RPA43YOR340C YEF1P32622 495 aa2.99□□□□□ -1.93
RPA43YOR340C TOA2P32774 122 aa2.99□□□□□ -1.93
RPA43YOR340C VPS21P36017 210 aaKnown RBP2.99□□□□□ -1.93
RPA43YOR340C YBR139WP38109 508 aa2.99□□□□□ -1.93
RPA43YOR340C HEK2P38199 381 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
RPA43YOR340C YHR218WP38899 603 aa2.99□□□□□ -1.93
RPA43YOR340C RGI1P40043 161 aaPredicted RBP2.99□□□□□ -1.93
RPA43YOR340C JLP2P40206 208 aa2.99□□□□□ -1.93
RPA43YOR340C YIL001WP40560 513 aa2.99□□□□□ -1.93
RPA43YOR340C PHB1P40961 287 aa2.99□□□□□ -1.93
RPA43YOR340C GAB1P41733 394 aa2.99□□□□□ -1.93
RPA43YOR340C CUP9P41817 306 aa2.99□□□□□ -1.93
RPA43YOR340C IDP2P41939 412 aa2.99□□□□□ -1.93
RPA43YOR340C WWM1P43582 211 aaKnown RBP2.99□□□□□ -1.93
RPA43YOR340C YGR067CP53243 804 aa2.99□□□□□ -1.93
RPA43YOR340C TPC1P53257 314 aa2.99□□□□□ -1.93
RPA43YOR340C RRN9P53437 365 aa2.99□□□□□ -1.93
RPA43YOR340C SPR6Q01684 191 aa2.99□□□□□ -1.93
RPA43YOR340C YMR010WQ03687 405 aa2.99□□□□□ -1.93
RPA43YOR340C SCW10Q04951 389 aa2.99□□□□□ -1.93
RPA43YOR340C AKR2Q12013 749 aa2.99□□□□□ -1.93
RPA43YOR340C RTC5Q12108 567 aaKnown RBP2.99□□□□□ -1.93
RPA43YOR340C TPO4Q12256 659 aa2.99□□□□□ -1.93
RPA43YOR340C TRP1P00912 224 aa2.98□□□□□ -1.93
RPA43YOR340C GPI12P23797 304 aa2.98□□□□□ -1.93
RPA43YOR340C MSK1P32048 576 aa2.98□□□□□ -1.93
RPA43YOR340C MKK1P32490 508 aa2.98□□□□□ -1.93
RPA43YOR340C LHP1P33399 275 aaKnown RBP2.98□□□□□ -1.93
RPA43YOR340C OM14P38325 134 aa2.98□□□□□ -1.93
RPA43YOR340C TRM5P38793 499 aa2.98□□□□□ -1.93
RPA43YOR340C FRT2P39734 528 aa2.98□□□□□ -1.93
RPA43YOR340C PRM5P40476 318 aa2.98□□□□□ -1.93
RPA43YOR340C LYS12P40495 371 aaKnown RBP2.98□□□□□ -1.93
RPA43YOR340C YMR310CQ04867 317 aaPredicted RBP2.98□□□□□ -1.93
RPA43YOR340C YLR036CQ07986 203 aa2.98□□□□□ -1.93
RPA43YOR340C TMS1Q12116 473 aa2.98□□□□□ -1.93
RPA43YOR340C GET4Q12125 312 aa2.98□□□□□ -1.93
RPA43YOR340C YLR108CQ12259 485 aa2.98□□□□□ -1.93
RPA43YOR340C YRM1Q12340 786 aa2.98□□□□□ -1.93
RPA43YOR340C YOP1Q12402 180 aa2.98□□□□□ -1.93
RPA43YOR340C AIM45Q12480 344 aaKnown RBP2.98□□□□□ -1.93
RPA43YOR340C SEC16P48415 2195 aaKnown RBP2.97□□□□□ -1.93
RPA43YOR340C UGA1P17649 471 aa2.97□□□□□ -1.93
RPA43YOR340C CPR4P25334 318 aa2.97□□□□□ -1.93
RPA43YOR340C HMX1P32339 317 aa2.97□□□□□ -1.93
RPA43YOR340C IST2P38250 946 aa2.97□□□□□ -1.93
RPA43YOR340C FES1P38260 290 aa2.97□□□□□ -1.93
RPA43YOR340C RCK1P38622 512 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms