RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W VAB2P40003 282 aa2.75□□□□□ -1.97
MSH2YOL090W JLP2P40206 208 aa2.75□□□□□ -1.97
MSH2YOL090W PMT4P46971 762 aa2.75□□□□□ -1.97
MSH2YOL090W YJR012CP47087 207 aa2.75□□□□□ -1.97
MSH2YOL090W YJR030CP47101 745 aa2.75□□□□□ -1.97
MSH2YOL090W NBP35P52920 328 aa2.75□□□□□ -1.97
MSH2YOL090W SWS2P53937 143 aa2.75□□□□□ -1.97
MSH2YOL090W ODC1Q03028 310 aa2.75□□□□□ -1.97
MSH2YOL090W GLO2Q05584 274 aa2.75□□□□□ -1.97
MSH2YOL090W TPO3Q06451 622 aa2.75□□□□□ -1.97
MSH2YOL090W MHR1Q06630 226 aa2.75□□□□□ -1.97
MSH2YOL090W CTR3Q06686 241 aa2.75□□□□□ -1.97
MSH2YOL090W RPL20AP0CX23 172 aaKnown RBP2.75□□□□□ -1.97
MSH2YOL090W RPL20BP0CX24 172 aaPredicted RBP2.75□□□□□ -1.97
MSH2YOL090W SPS100P13130 326 aa2.75□□□□□ -1.97
MSH2YOL090W CHA1P25379 360 aaKnown RBP2.75□□□□□ -1.97
MSH2YOL090W SGE1P33335 543 aa2.75□□□□□ -1.97
MSH2YOL090W FZO1P38297 855 aa2.75□□□□□ -1.97
MSH2YOL090W TRM5P38793 499 aa2.75□□□□□ -1.97
MSH2YOL090W SER33P40510 469 aa2.75□□□□□ -1.97
MSH2YOL090W EAF6P47128 113 aa2.75□□□□□ -1.97
MSH2YOL090W USE1P53146 245 aa2.75□□□□□ -1.97
MSH2YOL090W ECM11Q04110 302 aa2.75□□□□□ -1.97
MSH2YOL090W USB1Q12208 290 aaKnown RBP2.75□□□□□ -1.97
MSH2YOL090W RPL16BP26785 198 aaKnown RBP2.75□□□□□ -1.97
MSH2YOL090W KAR9P32526 644 aa2.75□□□□□ -1.97
MSH2YOL090W NUF2P33895 451 aa2.75□□□□□ -1.97
MSH2YOL090W JEN1P36035 616 aa2.75□□□□□ -1.97
MSH2YOL090W CHS7P38843 316 aa2.75□□□□□ -1.97
MSH2YOL090W TDA11P38854 504 aa2.75□□□□□ -1.97
MSH2YOL090W TPN1P53099 579 aa2.75□□□□□ -1.97
MSH2YOL090W CTL1Q03220 320 aaKnown RBP2.75□□□□□ -1.97
MSH2YOL090W YPR147CQ06522 304 aaKnown RBP2.75□□□□□ -1.97
MSH2YOL090W YEH2Q07950 538 aa2.75□□□□□ -1.97
MSH2YOL090W AIM39Q08223 395 aa2.75□□□□□ -1.97
MSH2YOL090W YNG1Q08465 219 aa2.75□□□□□ -1.97
MSH2YOL090W RDL2Q08742 149 aaKnown RBP2.75□□□□□ -1.97
MSH2YOL090W TIM18Q08749 192 aa2.75□□□□□ -1.97
MSH2YOL090W RIO1Q12196 484 aaKnown RBP2.75□□□□□ -1.97
MSH2YOL090W YGK3Q12222 375 aaPredicted RBP2.75□□□□□ -1.97
MSH2YOL090W PET20Q99373 253 aa2.75□□□□□ -1.97
MSH2YOL090W GCY1P14065 312 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
MSH2YOL090W PHA2P32452 334 aa2.74□□□□□ -1.97
MSH2YOL090W YCR087C-AP37263 153 aa2.74□□□□□ -1.97
MSH2YOL090W SDS24P38314 527 aa2.74□□□□□ -1.97
MSH2YOL090W RSM25P40496 264 aa2.74□□□□□ -1.97
MSH2YOL090W CIN2P46670 268 aa2.74□□□□□ -1.97
MSH2YOL090W SFH5P47008 294 aa2.74□□□□□ -1.97
MSH2YOL090W GWT1P47026 490 aa2.74□□□□□ -1.97
MSH2YOL090W TRM9P49957 279 aa2.74□□□□□ -1.97
MSH2YOL090W MRM2P53123 320 aa2.74□□□□□ -1.97
MSH2YOL090W JAC1P53193 184 aa2.74□□□□□ -1.97
MSH2YOL090W SUN4P53616 420 aa2.74□□□□□ -1.97
MSH2YOL090W YNR066CP53752 436 aa2.74□□□□□ -1.97
MSH2YOL090W PRM6Q04705 352 aa2.74□□□□□ -1.97
MSH2YOL090W BCH1Q05029 724 aa2.74□□□□□ -1.97
MSH2YOL090W DDC1Q08949 612 aa2.74□□□□□ -1.97
MSH2YOL090W YPL199CQ08954 240 aa2.74□□□□□ -1.97
MSH2YOL090W MMT2Q08970 484 aa2.74□□□□□ -1.97
MSH2YOL090W YOR114WQ12219 294 aa2.74□□□□□ -1.97
MSH2YOL090W IZH4Q99393 312 aa2.74□□□□□ -1.97
MSH2YOL090W YAR066WP0CX18 203 aa2.74□□□□□ -1.97
MSH2YOL090W YHR214WP0CX19 203 aa2.74□□□□□ -1.97
MSH2YOL090W YAP1P19880 650 aaKnown RBP2.74□□□□□ -1.97
MSH2YOL090W UBC8P28263 218 aa2.74□□□□□ -1.97
MSH2YOL090W SPS18P32572 300 aa2.74□□□□□ -1.97
MSH2YOL090W MUD1P32605 298 aaKnown RBP2.74□□□□□ -1.97
MSH2YOL090W SRP102P36057 244 aaPredicted RBP2.74□□□□□ -1.97
MSH2YOL090W YKR041WP36134 250 aa2.74□□□□□ -1.97
MSH2YOL090W ECM13P38195 257 aa2.74□□□□□ -1.97
MSH2YOL090W MST28P39552 234 aa2.74□□□□□ -1.97
MSH2YOL090W AVT1P47082 602 aa2.74□□□□□ -1.97
MSH2YOL090W TOS8P53147 276 aa2.74□□□□□ -1.97
MSH2YOL090W SYF2P53277 215 aaPredicted RBP2.74□□□□□ -1.97
MSH2YOL090W ASI3P53983 676 aa2.74□□□□□ -1.97
MSH2YOL090W HNT3Q08702 217 aa2.74□□□□□ -1.97
MSH2YOL090W YLR112WQ12130 139 aa2.74□□□□□ -1.97
MSH2YOL090W YPL229WQ99395 206 aa2.74□□□□□ -1.97
MSH2YOL090W RPL28P02406 149 aaKnown RBP2.73□□□□□ -1.97
MSH2YOL090W SLY1P22213 666 aa2.73□□□□□ -1.97
MSH2YOL090W SRY1P36007 326 aa2.73□□□□□ -1.97
MSH2YOL090W PET8P38921 284 aa2.73□□□□□ -1.97
MSH2YOL090W SEO1P39709 593 aa2.73□□□□□ -1.97
MSH2YOL090W YJR056CP47115 236 aa2.73□□□□□ -1.97
MSH2YOL090W OST3P48439 350 aa2.73□□□□□ -1.97
MSH2YOL090W NUP57P48837 541 aa2.73□□□□□ -1.97
MSH2YOL090W AVT4P50944 713 aa2.73□□□□□ -1.97
MSH2YOL090W YGL235WP53071 178 aa2.73□□□□□ -1.97
MSH2YOL090W YLR152CP54072 576 aa2.73□□□□□ -1.97
MSH2YOL090W TRM44Q02648 567 aaKnown RBP2.73□□□□□ -1.97
MSH2YOL090W IRC15Q02733 499 aa2.73□□□□□ -1.97
MSH2YOL090W COQ10Q08058 207 aa2.73□□□□□ -1.97
MSH2YOL090W YPL150WQ12152 901 aa2.73□□□□□ -1.97
MSH2YOL090W FRE8Q12209 686 aa2.73□□□□□ -1.97
MSH2YOL090W UTP23Q12339 254 aaKnown RBP2.73□□□□□ -1.97
MSH2YOL090W RPS3P05750 240 aaKnown RBP2.73□□□□□ -1.97
MSH2YOL090W SEN2P16658 377 aa2.73□□□□□ -1.97
MSH2YOL090W GLN3P18494 730 aa2.73□□□□□ -1.97
MSH2YOL090W TRR1P29509 319 aaKnown RBP2.73□□□□□ -1.97
MSH2YOL090W YBR062CP38239 180 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms