RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR3	YLR442C	SPO24	Q3E752	67 aa		2.25	□□□□□ -2.05
SIR3	YLR442C	BPT1	P14772	1559 aa		2.25	□□□□□ -2.05
SIR3	YLR442C	NUP159	P40477	1460 aa		2.25	□□□□□ -2.05
SIR3	YLR442C	PDR12	Q02785	1511 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	YBR085C-A	O43137	85 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	CAR1	P00812	333 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	RPL18A	P0CX49	186 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	RPL18B	P0CX50	186 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	FCY2	P17064	533 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	CPT1	P17898	393 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	SPO11	P23179	398 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	SCO1	P23833	295 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	TRX3	P25372	127 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	MGT1	P26188	188 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	CYS4	P32582	507 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	SEC17	P32602	292 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	WBP1	P33767	430 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	COS9	P36034	407 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	FRM2	P37261	193 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	YBR139W	P38109	508 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	THI2	P38141	450 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	YBR285W	P38354	144 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	YHR112C	P38716	378 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	DOG2	P38773	246 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	CCT4	P39078	528 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	VPS52	P39904	641 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	TMA23	Q03525	211 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	CGI121	Q03705	181 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	YMR160W	Q03823	816 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	PRM6	Q04705	352 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	COQ11	Q05892	277 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	GRX8	Q05926	109 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	CNL1	Q06333	122 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	TPO4	Q12256	659 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	ARO1	P08566	1588 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	TY1B-BR	Q12193	1756 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	URA3	P03962	267 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	CTA1	P15202	515 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	ERD2	P18414	219 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	TKL1	P23254	680 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	ERG8	P24521	451 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	ILV6	P25605	309 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	GAC1	P28006	793 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	YEA6	P39953	335 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	KRE29	P40026	464 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	POP1	P41812	875 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	HXT16	P47185	567 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	ASN1	P49089	572 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	SCS3	P53012	380 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	LST7	P53237	242 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	SMP3	Q04174	516 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	YLR407W	Q06070	228 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	GAS2	Q06135	555 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	MRX9	Q07349	420 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	CYK3	Q07533	885 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	TMA16	Q08687	178 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	FEX2	Q08991	375 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	YPQ1	Q12010	308 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	ATX2	Q12067	313 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	YPL066W	Q12194	479 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	YLL058W	Q12198	575 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	RDI1	Q12434	202 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	RRD2	Q12461	358 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	IZH4	Q99393	312 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	HIR3	P47171	1648 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	CHC1	P22137	1653 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	RPO21	P04050	1733 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	YDR157W	A0A023PZE8	133 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	COX2	P00410	251 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	CPR1	P14832	162 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	YKL075C	P36083	450 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	YPK3	P38070	525 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	QDR3	P38227	689 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	SET5	P38890	526 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	GLE2	P40066	365 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	AVT6	P40074	448 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	BMT5	P40493	336 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	YJR011C	P47086	261 aa	Predicted RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	STE24	P47154	453 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	MRPS35	P53292	345 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	YPR003C	P53394	754 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	HPT1	Q04178	221 aa	Known RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	YLR446W	Q06204	433 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	NOC4	Q06512	552 aa	Predicted RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	YLR030W	Q07967	263 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	FCF2	Q12035	217 aa	Predicted RBP	2.24	□□□□□ -2.05
SIR3	YLR442C	RMD5	Q12508	421 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	BI3	Q9ZZW7	517 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	USO1	P25386	1790 aa		2.24	□□□□□ -2.05
SIR3	YLR442C	TY3B-G	Q99315	1547 aa		2.23	□□□□□ -2.05
SIR3	YLR442C	TY1B-DR5	P0C2I2	1755 aa		2.23	□□□□□ -2.05
SIR3	YLR442C	TY1B-DR6	P0C2I3	1755 aa		2.23	□□□□□ -2.05
SIR3	YLR442C	TY1B-LR2	P0C2I5	1755 aa		2.23	□□□□□ -2.05
SIR3	YLR442C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	2.23	□□□□□ -2.05
SIR3	YLR442C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	2.23	□□□□□ -2.05
SIR3	YLR442C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	2.23	□□□□□ -2.05
SIR3	YLR442C	TY1B-JR1	P47098	1755 aa		2.23	□□□□□ -2.05
SIR3	YLR442C	TY1B-ML2	Q03434	1755 aa	Known RBP	2.23	□□□□□ -2.05
SIR3	YLR442C	TY1B-ER1	Q03612	1755 aa		2.23	□□□□□ -2.05
SIR3	YLR442C	TY1B-ML1	Q04711	1755 aa	Known RBP	2.23	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms