RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W BER1Q06688 274 aaKnown RBP3.23□□□□□ -1.89
LCB5YLR260W MUM3Q08750 479 aa3.23□□□□□ -1.89
LCB5YLR260W ICT1Q12385 394 aa3.23□□□□□ -1.89
LCB5YLR260W YAR066WP0CX18 203 aa3.22□□□□□ -1.89
LCB5YLR260W YHR214WP0CX19 203 aa3.22□□□□□ -1.89
LCB5YLR260W CBS2P14905 389 aa3.22□□□□□ -1.89
LCB5YLR260W CHA1P25379 360 aaKnown RBP3.22□□□□□ -1.89
LCB5YLR260W SKN1P33336 771 aa3.22□□□□□ -1.89
LCB5YLR260W TIP20P33891 701 aa3.22□□□□□ -1.89
LCB5YLR260W MTR2P34232 184 aaKnown RBP3.22□□□□□ -1.89
LCB5YLR260W CPR5P35176 225 aa3.22□□□□□ -1.89
LCB5YLR260W FZO1P38297 855 aa3.22□□□□□ -1.89
LCB5YLR260W YBR242WP38331 238 aa3.22□□□□□ -1.89
LCB5YLR260W SSH1P38353 490 aaKnown RBP3.22□□□□□ -1.89
LCB5YLR260W TRM5P38793 499 aa3.22□□□□□ -1.89
LCB5YLR260W PHM8P40025 321 aa3.22□□□□□ -1.89
LCB5YLR260W LYS12P40495 371 aaKnown RBP3.22□□□□□ -1.89
LCB5YLR260W SYG1P40528 902 aa3.22□□□□□ -1.89
LCB5YLR260W NAS6P50086 228 aa3.22□□□□□ -1.89
LCB5YLR260W PKP2P53170 491 aa3.22□□□□□ -1.89
LCB5YLR260W BUD17P53727 317 aa3.22□□□□□ -1.89
LCB5YLR260W MMT1Q03218 510 aa3.22□□□□□ -1.89
LCB5YLR260W TRS23Q03784 219 aa3.22□□□□□ -1.89
LCB5YLR260W PBP4Q07362 185 aaKnown RBP3.22□□□□□ -1.89
LCB5YLR260W YLR111WQ12528 110 aa3.22□□□□□ -1.89
LCB5YLR260W PET20Q99373 253 aa3.22□□□□□ -1.89
LCB5YLR260W CYR1P08678 2026 aaKnown RBP3.22□□□□□ -1.89
LCB5YLR260W DST1P07273 309 aa3.21□□□□□ -1.89
LCB5YLR260W CHO1P08456 276 aa3.21□□□□□ -1.89
LCB5YLR260W CTR86P25355 563 aa3.21□□□□□ -1.89
LCB5YLR260W CTP1P38152 299 aa3.21□□□□□ -1.89
LCB5YLR260W IKI1P38874 309 aa3.21□□□□□ -1.89
LCB5YLR260W POP1P41812 875 aa3.21□□□□□ -1.89
LCB5YLR260W LYS20P48570 428 aaKnown RBP3.21□□□□□ -1.89
LCB5YLR260W RHO3Q00245 231 aaKnown RBP3.21□□□□□ -1.89
LCB5YLR260W SED5Q01590 340 aa3.21□□□□□ -1.89
LCB5YLR260W GIP3Q03016 1276 aa3.21□□□□□ -1.89
LCB5YLR260W CAC2Q04199 468 aa3.21□□□□□ -1.89
LCB5YLR260W HSP31Q04432 237 aa3.21□□□□□ -1.89
LCB5YLR260W TMA10Q06177 86 aa3.21□□□□□ -1.89
LCB5YLR260W DXO1Q06349 442 aa3.21□□□□□ -1.89
LCB5YLR260W WTM1Q12363 437 aaKnown RBP3.21□□□□□ -1.89
LCB5YLR260W GTT2Q12390 233 aa3.21□□□□□ -1.89
LCB5YLR260W PUT1P09368 476 aa3.21□□□□□ -1.9
LCB5YLR260W NMT1P14743 455 aa3.21□□□□□ -1.9
LCB5YLR260W SLM5P25345 492 aaKnown RBP3.21□□□□□ -1.9
LCB5YLR260W KAR4P25583 335 aa3.21□□□□□ -1.9
LCB5YLR260W YCR101CP25607 182 aa3.21□□□□□ -1.9
LCB5YLR260W PPZ2P33329 710 aa3.21□□□□□ -1.9
LCB5YLR260W MRPS5P33759 307 aa3.21□□□□□ -1.9
LCB5YLR260W HAT2P39984 401 aa3.21□□□□□ -1.9
LCB5YLR260W YGL204CP53089 101 aa3.21□□□□□ -1.9
LCB5YLR260W YIP4P53093 235 aa3.21□□□□□ -1.9
LCB5YLR260W RPL22BP56628 122 aaKnown RBP3.21□□□□□ -1.9
LCB5YLR260W GOT1Q03554 138 aa3.21□□□□□ -1.9
LCB5YLR260W CCE1Q03702 353 aa3.21□□□□□ -1.9
LCB5YLR260W DLT1Q04216 342 aa3.21□□□□□ -1.9
LCB5YLR260W LDS2Q08218 356 aa3.21□□□□□ -1.9
LCB5YLR260W YPL278CQ08990 100 aa3.21□□□□□ -1.9
LCB5YLR260W TPT1Q12272 230 aaKnown RBP3.21□□□□□ -1.9
LCB5YLR260W SET6Q12529 373 aa3.21□□□□□ -1.9
LCB5YLR260W NAM2P11325 894 aa3.2□□□□□ -1.9
LCB5YLR260W RPB8P20436 146 aa3.2□□□□□ -1.9
LCB5YLR260W CDC10P25342 322 aaKnown RBP3.2□□□□□ -1.9
LCB5YLR260W PTM1P32857 523 aa3.2□□□□□ -1.9
LCB5YLR260W MSN2P33748 704 aa3.2□□□□□ -1.9
LCB5YLR260W MRPL17P36528 281 aa3.2□□□□□ -1.9
LCB5YLR260W ATG7P38862 630 aa3.2□□□□□ -1.9
LCB5YLR260W AZF1P41696 914 aa3.2□□□□□ -1.9
LCB5YLR260W PRM10P42946 383 aa3.2□□□□□ -1.9
LCB5YLR260W YJR154WP47181 346 aa3.2□□□□□ -1.9
LCB5YLR260W TOS2P50078 622 aa3.2□□□□□ -1.9
LCB5YLR260W YPT32P51996 222 aaKnown RBP3.2□□□□□ -1.9
LCB5YLR260W YGL235WP53071 178 aa3.2□□□□□ -1.9
LCB5YLR260W MKC7P53379 596 aa3.2□□□□□ -1.9
LCB5YLR260W YDR248CQ03786 193 aa3.2□□□□□ -1.9
LCB5YLR260W YMR027WQ04371 470 aa3.2□□□□□ -1.9
LCB5YLR260W ASA1Q06822 443 aa3.2□□□□□ -1.9
LCB5YLR260W ASR1Q06834 288 aa3.2□□□□□ -1.9
LCB5YLR260W YET3Q07451 203 aa3.2□□□□□ -1.9
LCB5YLR260W TMS1Q12116 473 aa3.2□□□□□ -1.9
LCB5YLR260W LAS17Q12446 633 aa3.2□□□□□ -1.9
LCB5YLR260W ATP6P00854 259 aa3.2□□□□□ -1.9
LCB5YLR260W RAD52P06778 471 aaKnown RBP3.2□□□□□ -1.9
LCB5YLR260W SWD2P36104 329 aaPredicted RBP3.2□□□□□ -1.9
LCB5YLR260W ETR1P38071 380 aa3.2□□□□□ -1.9
LCB5YLR260W EFM1P38732 585 aa3.2□□□□□ -1.9
LCB5YLR260W YHR127WP38833 243 aaKnown RBP3.2□□□□□ -1.9
LCB5YLR260W CIN5P40917 295 aa3.2□□□□□ -1.9
LCB5YLR260W IDP2P41939 412 aa3.2□□□□□ -1.9
LCB5YLR260W YJR111CP47148 283 aaKnown RBP3.2□□□□□ -1.9
LCB5YLR260W BOL2P53082 120 aa3.2□□□□□ -1.9
LCB5YLR260W NQM1P53228 333 aaPredicted RBP3.2□□□□□ -1.9
LCB5YLR260W YIF1P53845 314 aaKnown RBP3.2□□□□□ -1.9
LCB5YLR260W ERG13P54839 491 aaKnown RBP3.2□□□□□ -1.9
LCB5YLR260W YPL080CQ02826 108 aa3.2□□□□□ -1.9
LCB5YLR260W SEC13Q04491 297 aaKnown RBP3.2□□□□□ -1.9
LCB5YLR260W DTD1Q07648 150 aaKnown RBP3.2□□□□□ -1.9
LCB5YLR260W RSA1Q08932 381 aa3.2□□□□□ -1.9
LCB5YLR260W YPL247CQ12523 523 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms