RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W SIP2P34164 415 aaKnown RBP2.14□□□□□ -2.07
HRD3YLR207W GPX2P38143 162 aa2.14□□□□□ -2.07
HRD3YLR207W ECM8P38246 354 aa2.14□□□□□ -2.07
HRD3YLR207W COX15P40086 486 aa2.14□□□□□ -2.07
HRD3YLR207W ALG8P40351 577 aa2.14□□□□□ -2.07
HRD3YLR207W DIM1P41819 318 aaKnown RBP2.14□□□□□ -2.07
HRD3YLR207W RPL15BP54780 204 aaPredicted RBP2.14□□□□□ -2.07
HRD3YLR207W TMS1Q12116 473 aa2.14□□□□□ -2.07
HRD3YLR207W RGT2Q12300 763 aa2.14□□□□□ -2.07
HRD3YLR207W OCA6Q12454 224 aa2.14□□□□□ -2.07
HRD3YLR207W NSP1P14907 823 aaKnown RBP2.13□□□□□ -2.07
HRD3YLR207W ERD1P16151 362 aa2.13□□□□□ -2.07
HRD3YLR207W RNA15P25299 296 aaPredicted RBP2.13□□□□□ -2.07
HRD3YLR207W RPS5P26783 225 aaKnown RBP2.13□□□□□ -2.07
HRD3YLR207W RPL16BP26785 198 aaKnown RBP2.13□□□□□ -2.07
HRD3YLR207W IDH1P28834 360 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
HRD3YLR207W TPS2P31688 896 aaKnown RBP2.13□□□□□ -2.07
HRD3YLR207W KAR9P32526 644 aa2.13□□□□□ -2.07
HRD3YLR207W UBC6P33296 250 aaPredicted RBP2.13□□□□□ -2.07
HRD3YLR207W POP4P38336 279 aa2.13□□□□□ -2.07
HRD3YLR207W AIM18P38884 321 aa2.13□□□□□ -2.07
HRD3YLR207W SEC72P39742 193 aaKnown RBP2.13□□□□□ -2.07
HRD3YLR207W DDI1P40087 428 aa2.13□□□□□ -2.07
HRD3YLR207W UTP18P40362 594 aaPredicted RBP2.13□□□□□ -2.07
HRD3YLR207W SER33P40510 469 aa2.13□□□□□ -2.07
HRD3YLR207W YRB1P41920 201 aaKnown RBP2.13□□□□□ -2.07
HRD3YLR207W YJR079WP47126 109 aa2.13□□□□□ -2.07
HRD3YLR207W AVT4P50944 713 aa2.13□□□□□ -2.07
HRD3YLR207W MRM2P53123 320 aa2.13□□□□□ -2.07
HRD3YLR207W REX2P54964 269 aaKnown RBP2.13□□□□□ -2.07
HRD3YLR207W GIM5Q04493 163 aa2.13□□□□□ -2.07
HRD3YLR207W FMP42Q04991 504 aa2.13□□□□□ -2.07
HRD3YLR207W CTR3Q06686 241 aa2.13□□□□□ -2.07
HRD3YLR207W SNX3Q08826 162 aaKnown RBP2.13□□□□□ -2.07
HRD3YLR207W UTP23Q12339 254 aaKnown RBP2.13□□□□□ -2.07
HRD3YLR207W TFC7Q12415 435 aa2.13□□□□□ -2.07
HRD3YLR207W RIF1P29539 1916 aa2.13□□□□□ -2.07
HRD3YLR207W YER190C-BP0CX94 160 aa2.13□□□□□ -2.07
HRD3YLR207W YEL077W-AP0CX95 160 aa2.13□□□□□ -2.07
HRD3YLR207W YGR296C-BP0CX96 160 aa2.13□□□□□ -2.07
HRD3YLR207W YPL283W-BP0CX97 160 aa2.13□□□□□ -2.07
HRD3YLR207W YPR204C-AP0CX98 160 aa2.13□□□□□ -2.07
HRD3YLR207W AMD1P15274 810 aaKnown RBP2.13□□□□□ -2.07
HRD3YLR207W YMR31P19955 123 aa2.13□□□□□ -2.07
HRD3YLR207W RPO26P20435 155 aa2.13□□□□□ -2.07
HRD3YLR207W RAD5P32849 1169 aaPredicted RBP2.13□□□□□ -2.07
HRD3YLR207W KDX1P36005 433 aa2.13□□□□□ -2.07
HRD3YLR207W RIB5P38145 238 aa2.13□□□□□ -2.07
HRD3YLR207W MST28P39552 234 aa2.13□□□□□ -2.07
HRD3YLR207W YAT2P40017 923 aa2.13□□□□□ -2.07
HRD3YLR207W SMX2P40204 77 aaKnown RBP2.13□□□□□ -2.07
HRD3YLR207W YCH1P42937 148 aa2.13□□□□□ -2.07
HRD3YLR207W GLG2P47011 380 aa2.13□□□□□ -2.07
HRD3YLR207W SWC4P53201 476 aa2.13□□□□□ -2.07
HRD3YLR207W CSN9Q03981 162 aa2.13□□□□□ -2.07
HRD3YLR207W SNX41Q04053 625 aa2.13□□□□□ -2.07
HRD3YLR207W BCH1Q05029 724 aa2.13□□□□□ -2.07
HRD3YLR207W RTT103Q05543 409 aa2.13□□□□□ -2.07
HRD3YLR207W PER33Q12144 273 aa2.13□□□□□ -2.07
HRD3YLR207W YLR046CQ12253 270 aa2.13□□□□□ -2.07
HRD3YLR207W PEX11Q12462 236 aa2.13□□□□□ -2.07
HRD3YLR207W HTZ1Q12692 134 aaKnown RBP2.13□□□□□ -2.07
HRD3YLR207W GCN1P33892 2672 aaKnown RBP2.12□□□□□ -2.07
HRD3YLR207W RPL31AP0C2H8 113 aaKnown RBP2.12□□□□□ -2.07
HRD3YLR207W ATP7P30902 174 aa2.12□□□□□ -2.07
HRD3YLR207W NDC1P32500 655 aa2.12□□□□□ -2.07
HRD3YLR207W MRPL6P32904 214 aa2.12□□□□□ -2.07
HRD3YLR207W SGE1P33335 543 aa2.12□□□□□ -2.07
HRD3YLR207W VPS51P36116 164 aa2.12□□□□□ -2.07
HRD3YLR207W PRS2P38620 318 aaKnown RBP2.12□□□□□ -2.07
HRD3YLR207W EGD2P38879 174 aaKnown RBP2.12□□□□□ -2.07
HRD3YLR207W DHH1P39517 506 aaKnown RBP2.12□□□□□ -2.07
HRD3YLR207W ERG28P40030 148 aa2.12□□□□□ -2.07
HRD3YLR207W YNL194CP40169 301 aa2.12□□□□□ -2.07
HRD3YLR207W YIL001WP40560 513 aa2.12□□□□□ -2.07
HRD3YLR207W YJR012CP47087 207 aa2.12□□□□□ -2.07
HRD3YLR207W ABM1P47146 123 aa2.12□□□□□ -2.07
HRD3YLR207W YPT32P51996 222 aaKnown RBP2.12□□□□□ -2.07
HRD3YLR207W NBP35P52920 328 aa2.12□□□□□ -2.07
HRD3YLR207W LSG1P53145 640 aaKnown RBP2.12□□□□□ -2.07
HRD3YLR207W SCW4P53334 386 aaKnown RBP2.12□□□□□ -2.07
HRD3YLR207W YNL247WP53852 767 aaKnown RBP2.12□□□□□ -2.07
HRD3YLR207W NUP116Q02630 1113 aa2.12□□□□□ -2.07
HRD3YLR207W YMR027WQ04371 470 aa2.12□□□□□ -2.07
HRD3YLR207W YET3Q07451 203 aa2.12□□□□□ -2.07
HRD3YLR207W SNA4Q07549 140 aa2.12□□□□□ -2.07
HRD3YLR207W HTB1P02293 131 aaKnown RBP2.12□□□□□ -2.07
HRD3YLR207W HTB2P02294 131 aa2.12□□□□□ -2.07
HRD3YLR207W CTA1P15202 515 aa2.12□□□□□ -2.07
HRD3YLR207W HSP26P15992 214 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
HRD3YLR207W NAM9P27929 486 aa2.12□□□□□ -2.07
HRD3YLR207W ASK1P35734 292 aa2.12□□□□□ -2.07
HRD3YLR207W TRM5P38793 499 aa2.12□□□□□ -2.07
HRD3YLR207W COX14P39103 70 aa2.12□□□□□ -2.07
HRD3YLR207W WWM1P43582 211 aaKnown RBP2.12□□□□□ -2.07
HRD3YLR207W AIM23P47015 356 aa2.12□□□□□ -2.07
HRD3YLR207W COG7P53195 279 aa2.12□□□□□ -2.07
HRD3YLR207W PEX31P53203 462 aa2.12□□□□□ -2.07
HRD3YLR207W VBA1Q04301 562 aa2.12□□□□□ -2.07
HRD3YLR207W SRO7Q12038 1033 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms