RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C YMR087WQ04299 284 aa5.3□□□□□ -1.56
SSK1YLR006C BSP1Q06604 576 aa5.3□□□□□ -1.56
SSK1YLR006C ISU2Q12056 156 aa5.3□□□□□ -1.56
SSK1YLR006C MRX4Q12467 430 aa5.3□□□□□ -1.56
SSK1YLR006C SLH1P53327 1967 aaKnown RBP5.3□□□□□ -1.56
SSK1YLR006C CPA1P07258 411 aaKnown RBP5.3□□□□□ -1.56
SSK1YLR006C GDH1P07262 454 aaKnown RBP5.3□□□□□ -1.56
SSK1YLR006C RPS16AP0CX51 143 aaKnown RBP5.3□□□□□ -1.56
SSK1YLR006C RPS16BP0CX52 143 aaKnown RBP5.3□□□□□ -1.56
SSK1YLR006C STF2P16965 84 aa5.3□□□□□ -1.56
SSK1YLR006C VMA16P23968 213 aa5.3□□□□□ -1.56
SSK1YLR006C TRX3P25372 127 aa5.3□□□□□ -1.56
SSK1YLR006C ATG22P25568 528 aa5.3□□□□□ -1.56
SSK1YLR006C IDH1P28834 360 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
SSK1YLR006C MNS1P32906 549 aa5.3□□□□□ -1.56
SSK1YLR006C UPS2P35200 230 aa5.3□□□□□ -1.56
SSK1YLR006C VBA2P38358 474 aaKnown RBP5.3□□□□□ -1.56
SSK1YLR006C DBP8P38719 431 aa5.3□□□□□ -1.56
SSK1YLR006C CTF8P38877 133 aa5.3□□□□□ -1.56
SSK1YLR006C ATG18P43601 500 aa5.3□□□□□ -1.56
SSK1YLR006C SFH5P47008 294 aa5.3□□□□□ -1.56
SSK1YLR006C MPC1P53157 130 aaKnown RBP5.3□□□□□ -1.56
SSK1YLR006C VPS62P53285 467 aa5.3□□□□□ -1.56
SSK1YLR006C SWF1Q04629 336 aa5.3□□□□□ -1.56
SSK1YLR006C YPR127WQ06494 345 aa5.3□□□□□ -1.56
SSK1YLR006C RRG7Q08774 242 aaPredicted RBP5.3□□□□□ -1.56
SSK1YLR006C RTR2Q12378 196 aa5.3□□□□□ -1.56
SSK1YLR006C MTF1P14908 341 aaKnown RBP5.29□□□□□ -1.56
SSK1YLR006C OAC1P32332 324 aa5.29□□□□□ -1.56
SSK1YLR006C ECM25P32525 599 aa5.29□□□□□ -1.56
SSK1YLR006C ANR2P36090 516 aaPredicted RBP5.29□□□□□ -1.56
SSK1YLR006C YBR137WP38276 179 aa5.29□□□□□ -1.56
SSK1YLR006C GRE3P38715 327 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
SSK1YLR006C YHR127WP38833 243 aaKnown RBP5.29□□□□□ -1.56
SSK1YLR006C YHR177WP38867 453 aa5.29□□□□□ -1.56
SSK1YLR006C NVJ1P38881 321 aa5.29□□□□□ -1.56
SSK1YLR006C YJL218WP40892 196 aaKnown RBP5.29□□□□□ -1.56
SSK1YLR006C AZF1P41696 914 aa5.29□□□□□ -1.56
SSK1YLR006C MID1P41821 548 aa5.29□□□□□ -1.56
SSK1YLR006C YFL054CP43549 646 aa5.29□□□□□ -1.56
SSK1YLR006C IRC18P47056 224 aa5.29□□□□□ -1.56
SSK1YLR006C CCC1P47818 322 aa5.29□□□□□ -1.56
SSK1YLR006C YGL235WP53071 178 aa5.29□□□□□ -1.56
SSK1YLR006C SYF2P53277 215 aaPredicted RBP5.29□□□□□ -1.56
SSK1YLR006C MKC7P53379 596 aa5.29□□□□□ -1.56
SSK1YLR006C RPP2AP05319 106 aaKnown RBP5.29□□□□□ -1.56
SSK1YLR006C ATP10P18496 279 aa5.29□□□□□ -1.56
SSK1YLR006C AIM17P23180 465 aaKnown RBP5.29□□□□□ -1.56
SSK1YLR006C DEG1P31115 442 aaKnown RBP5.29□□□□□ -1.56
SSK1YLR006C SDH8P38345 138 aa5.29□□□□□ -1.56
SSK1YLR006C PFA3P42836 336 aa5.29□□□□□ -1.56
SSK1YLR006C MNN5P46982 586 aa5.29□□□□□ -1.56
SSK1YLR006C GCV1P48015 400 aa5.29□□□□□ -1.56
SSK1YLR006C VPS73P53142 486 aaKnown RBP5.29□□□□□ -1.56
SSK1YLR006C CWC25P53854 179 aaKnown RBP5.29□□□□□ -1.56
SSK1YLR006C OCA2P53949 197 aa5.29□□□□□ -1.56
SSK1YLR006C YMR178WQ03219 274 aaKnown RBP5.29□□□□□ -1.56
SSK1YLR006C VHS1Q03785 461 aa5.29□□□□□ -1.56
SSK1YLR006C RGC1Q06108 1083 aaKnown RBP5.29□□□□□ -1.56
SSK1YLR006C SPO24Q3E752 67 aa5.29□□□□□ -1.56
SSK1YLR006C YOR338WQ99326 363 aa5.29□□□□□ -1.56
SSK1YLR006C YPR096CO13587 100 aa5.28□□□□□ -1.56
SSK1YLR006C AI3P03877 415 aa5.28□□□□□ -1.56
SSK1YLR006C TFS1P14306 219 aa5.28□□□□□ -1.56
SSK1YLR006C YMR31P19955 123 aa5.28□□□□□ -1.56
SSK1YLR006C EPT1P22140 391 aa5.28□□□□□ -1.56
SSK1YLR006C RPS1BP23248 255 aaKnown RBP5.28□□□□□ -1.56
SSK1YLR006C TAH1P25638 111 aaPredicted RBP5.28□□□□□ -1.56
SSK1YLR006C YBL010CP32788 280 aa5.28□□□□□ -1.56
SSK1YLR006C JEN1P36035 616 aa5.28□□□□□ -1.56
SSK1YLR006C GIC1P38785 314 aa5.28□□□□□ -1.56
SSK1YLR006C SRP14P38985 146 aa5.28□□□□□ -1.56
SSK1YLR006C DUS1P53759 423 aaKnown RBP5.28□□□□□ -1.56
SSK1YLR006C SNO1Q03144 224 aa5.28□□□□□ -1.56
SSK1YLR006C TRM82Q03774 444 aa5.28□□□□□ -1.56
SSK1YLR006C MRPL51Q06090 140 aaPredicted RBP5.28□□□□□ -1.56
SSK1YLR006C IPK1Q06667 281 aa5.28□□□□□ -1.56
SSK1YLR006C ASR1Q06834 288 aa5.28□□□□□ -1.56
SSK1YLR006C TEN1Q07921 160 aa5.28□□□□□ -1.56
SSK1YLR006C FRE5Q08908 694 aa5.28□□□□□ -1.56
SSK1YLR006C USB1Q12208 290 aaKnown RBP5.28□□□□□ -1.56
SSK1YLR006C AIM45Q12480 344 aaKnown RBP5.28□□□□□ -1.56
SSK1YLR006C YEL009C-AA0A023PZF2 135 aa5.27□□□□□ -1.57
SSK1YLR006C PUT1P09368 476 aa5.27□□□□□ -1.57
SSK1YLR006C RPL18AP0CX49 186 aaKnown RBP5.27□□□□□ -1.57
SSK1YLR006C RPL18BP0CX50 186 aaKnown RBP5.27□□□□□ -1.57
SSK1YLR006C PRO1P32264 428 aa5.27□□□□□ -1.57
SSK1YLR006C HYM1P32464 399 aa5.27□□□□□ -1.57
SSK1YLR006C SUI1P32911 108 aaKnown RBP5.27□□□□□ -1.57
SSK1YLR006C RRP3P38712 501 aaKnown RBP5.27□□□□□ -1.57
SSK1YLR006C GPI16P38875 610 aa5.27□□□□□ -1.57
SSK1YLR006C YJL193WP39542 402 aa5.27□□□□□ -1.57
SSK1YLR006C BUR6P40096 142 aa5.27□□□□□ -1.57
SSK1YLR006C MOG1P47123 218 aa5.27□□□□□ -1.57
SSK1YLR006C SKP1P52286 194 aa5.27□□□□□ -1.57
SSK1YLR006C SWC4P53201 476 aa5.27□□□□□ -1.57
SSK1YLR006C YNR040WP53736 256 aa5.27□□□□□ -1.57
SSK1YLR006C DID2P69771 204 aa5.27□□□□□ -1.57
SSK1YLR006C YLR446WQ06204 433 aa5.27□□□□□ -1.57
SSK1YLR006C MRPL35Q06678 367 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 1094.4 ms