RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W RFC3P38629 340 aa3.3□□□□□ -1.88
SSL1YLR005W ALP1P38971 573 aa3.3□□□□□ -1.88
SSL1YLR005W IRC5P43610 853 aa3.3□□□□□ -1.88
SSL1YLR005W BAT2P47176 376 aaKnown RBP3.3□□□□□ -1.88
SSL1YLR005W GPI8P49018 411 aa3.3□□□□□ -1.88
SSL1YLR005W TAF4P50105 388 aa3.3□□□□□ -1.88
SSL1YLR005W YGR054WP53235 642 aaKnown RBP3.3□□□□□ -1.88
SSL1YLR005W COG2P53271 262 aa3.3□□□□□ -1.88
SSL1YLR005W COS1P53822 381 aa3.3□□□□□ -1.88
SSL1YLR005W DUG3P53871 357 aa3.3□□□□□ -1.88
SSL1YLR005W DML1Q03652 475 aa3.3□□□□□ -1.88
SSL1YLR005W DBP9Q06218 594 aaKnown RBP3.3□□□□□ -1.88
SSL1YLR005W YPR202WQ08993 238 aa3.3□□□□□ -1.88
SSL1YLR005W RTR2Q12378 196 aa3.3□□□□□ -1.88
SSL1YLR005W YKL068W-AQ3E826 78 aa3.3□□□□□ -1.88
SSL1YLR005W MHF2Q3E829 80 aa3.3□□□□□ -1.88
SSL1YLR005W MSW1P04803 379 aa3.29□□□□□ -1.88
SSL1YLR005W RPL6BP05739 176 aaKnown RBP3.29□□□□□ -1.88
SSL1YLR005W PET9P18239 318 aaKnown RBP3.29□□□□□ -1.88
SSL1YLR005W PEX3P28795 441 aa3.29□□□□□ -1.88
SSL1YLR005W YHR218WP38899 603 aa3.29□□□□□ -1.88
SSL1YLR005W YIP5P53108 310 aa3.29□□□□□ -1.88
SSL1YLR005W SYF2P53277 215 aaPredicted RBP3.29□□□□□ -1.88
SSL1YLR005W YGR168CP53293 376 aa3.29□□□□□ -1.88
SSL1YLR005W MEP3P53390 489 aa3.29□□□□□ -1.88
SSL1YLR005W YNR062CP53748 327 aa3.29□□□□□ -1.88
SSL1YLR005W DSL1P53847 754 aa3.29□□□□□ -1.88
SSL1YLR005W TPS1Q00764 495 aaKnown RBP3.29□□□□□ -1.88
SSL1YLR005W YMR279CQ03263 540 aa3.29□□□□□ -1.88
SSL1YLR005W YDR102CQ03864 110 aa3.29□□□□□ -1.88
SSL1YLR005W SNO4Q04902 237 aa3.29□□□□□ -1.88
SSL1YLR005W RNH202Q05635 350 aa3.29□□□□□ -1.88
SSL1YLR005W CTS2Q06350 511 aa3.29□□□□□ -1.88
SSL1YLR005W NDL1Q06568 189 aa3.29□□□□□ -1.88
SSL1YLR005W HSP33Q08914 237 aaKnown RBP3.29□□□□□ -1.88
SSL1YLR005W HSP32Q08992 237 aa3.29□□□□□ -1.88
SSL1YLR005W SIA1Q12212 622 aa3.29□□□□□ -1.88
SSL1YLR005W RNH203Q12338 110 aa3.29□□□□□ -1.88
SSL1YLR005W HMS1Q12398 434 aa3.29□□□□□ -1.88
SSL1YLR005W DPM1P14020 267 aaKnown RBP3.28□□□□□ -1.88
SSL1YLR005W APA2P22108 325 aa3.28□□□□□ -1.88
SSL1YLR005W RHB1P25378 209 aa3.28□□□□□ -1.88
SSL1YLR005W RER1P25560 188 aa3.28□□□□□ -1.88
SSL1YLR005W CNE1P27825 502 aa3.28□□□□□ -1.88
SSL1YLR005W TCA17P32613 152 aa3.28□□□□□ -1.88
SSL1YLR005W YME2P32843 850 aa3.28□□□□□ -1.88
SSL1YLR005W PAD1P33751 242 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
SSL1YLR005W RIB1P38066 345 aa3.28□□□□□ -1.88
SSL1YLR005W YBR138CP38277 524 aa3.28□□□□□ -1.88
SSL1YLR005W ISC1P40015 477 aaKnown RBP3.28□□□□□ -1.88
SSL1YLR005W SLZ1P40167 298 aa3.28□□□□□ -1.88
SSL1YLR005W MPM1P40364 252 aa3.28□□□□□ -1.88
SSL1YLR005W HPM1P40481 377 aa3.28□□□□□ -1.88
SSL1YLR005W YJL055WP47044 245 aa3.28□□□□□ -1.88
SSL1YLR005W BRR6P53062 197 aa3.28□□□□□ -1.88
SSL1YLR005W YNL033WP53964 284 aa3.28□□□□□ -1.88
SSL1YLR005W YNL019CP53975 284 aa3.28□□□□□ -1.88
SSL1YLR005W RRN5Q02983 363 aa3.28□□□□□ -1.88
SSL1YLR005W SPC19Q03954 165 aa3.28□□□□□ -1.88
SSL1YLR005W YDR391CQ04170 232 aa3.28□□□□□ -1.88
SSL1YLR005W GAT3Q07928 141 aa3.28□□□□□ -1.88
SSL1YLR005W MIM1Q08176 113 aa3.28□□□□□ -1.88
SSL1YLR005W MSA1Q08471 629 aa3.28□□□□□ -1.88
SSL1YLR005W SKI7Q08491 747 aaPredicted RBP3.28□□□□□ -1.88
SSL1YLR005W WTM1Q12363 437 aaKnown RBP3.28□□□□□ -1.88
SSL1YLR005W RRI1Q12468 440 aa3.28□□□□□ -1.88
SSL1YLR005W AQY1P0CD91 305 aa3.27□□□□□ -1.89
SSL1YLR005W YOL162WP0CF19 215 aa3.27□□□□□ -1.89
SSL1YLR005W CMK2P22517 447 aa3.27□□□□□ -1.89
SSL1YLR005W CLB4P24871 460 aa3.27□□□□□ -1.89
SSL1YLR005W STE50P25344 346 aa3.27□□□□□ -1.89
SSL1YLR005W RPN2P32565 945 aaKnown RBP3.27□□□□□ -1.89
SSL1YLR005W GLR1P41921 483 aaKnown RBP3.27□□□□□ -1.89
SSL1YLR005W IRC7P43623 340 aa3.27□□□□□ -1.89
SSL1YLR005W YHC3P47040 408 aa3.27□□□□□ -1.89
SSL1YLR005W YGL101WP53144 215 aa3.27□□□□□ -1.89
SSL1YLR005W PEF1P53238 335 aa3.27□□□□□ -1.89
SSL1YLR005W BUD17P53727 317 aa3.27□□□□□ -1.89
SSL1YLR005W PEX12Q04370 399 aa3.27□□□□□ -1.89
SSL1YLR005W IPK1Q06667 281 aa3.27□□□□□ -1.89
SSL1YLR005W SNA4Q07549 140 aa3.27□□□□□ -1.89
SSL1YLR005W CSI2Q08054 341 aa3.27□□□□□ -1.89
SSL1YLR005W SNX3Q08826 162 aaKnown RBP3.27□□□□□ -1.89
SSL1YLR005W RTN2Q12443 393 aa3.27□□□□□ -1.89
SSL1YLR005W SCEIP03882 235 aa3.26□□□□□ -1.89
SSL1YLR005W DBF2P22204 572 aa3.26□□□□□ -1.89
SSL1YLR005W IDH1P28834 360 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SSL1YLR005W ARC19P33204 171 aaKnown RBP3.26□□□□□ -1.89
SSL1YLR005W GDH2P33327 1092 aaKnown RBP3.26□□□□□ -1.89
SSL1YLR005W LTV1P34078 463 aa3.26□□□□□ -1.89
SSL1YLR005W HEK2P38199 381 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SSL1YLR005W SWD1P39706 426 aa3.26□□□□□ -1.89
SSL1YLR005W SGN1P40561 250 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SSL1YLR005W MIG2P53035 382 aa3.26□□□□□ -1.89
SSL1YLR005W RMD9P53140 646 aaKnown RBP3.26□□□□□ -1.89
SSL1YLR005W USE1P53146 245 aa3.26□□□□□ -1.89
SSL1YLR005W GPI1P53306 609 aa3.26□□□□□ -1.89
SSL1YLR005W SMM1P53720 384 aaKnown RBP3.26□□□□□ -1.89
SSL1YLR005W ATP23P53722 227 aa3.26□□□□□ -1.89
SSL1YLR005W YNL095CP53932 642 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 171.5 ms