RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W AVT6P40074 448 aa2.14□□□□□ -2.07
SEC28YIL076W UTP25P40498 721 aaKnown RBP2.14□□□□□ -2.07
SEC28YIL076W IKI3Q06706 1349 aaKnown RBP2.14□□□□□ -2.07
SEC28YIL076W TY3B-IQ7LHG5 1498 aaKnown RBP2.14□□□□□ -2.07
SEC28YIL076W NUP192P47054 1683 aa2.13□□□□□ -2.07
SEC28YIL076W RPL16BP26785 198 aaKnown RBP2.13□□□□□ -2.07
SEC28YIL076W TRM7P38238 310 aaKnown RBP2.13□□□□□ -2.07
SEC28YIL076W VAB2P40003 282 aa2.13□□□□□ -2.07
SEC28YIL076W BIO4P53630 237 aa2.13□□□□□ -2.07
SEC28YIL076W STE23Q06010 1027 aa2.13□□□□□ -2.07
SEC28YIL076W YDL144CQ07589 356 aa2.13□□□□□ -2.07
SEC28YIL076W VPS68Q12016 184 aa2.13□□□□□ -2.07
SEC28YIL076W YOR283WQ12040 230 aaKnown RBP2.13□□□□□ -2.07
SEC28YIL076W RRP5Q05022 1729 aaKnown RBP2.13□□□□□ -2.07
SEC28YIL076W RAD9P14737 1309 aa2.13□□□□□ -2.07
SEC28YIL076W RRT12P25381 491 aa2.12□□□□□ -2.07
SEC28YIL076W IMP3P32899 183 aaPredicted RBP2.12□□□□□ -2.07
SEC28YIL076W KRE29P40026 464 aa2.12□□□□□ -2.07
SEC28YIL076W UBC13P52490 153 aa2.12□□□□□ -2.07
SEC28YIL076W CGI121Q03705 181 aaKnown RBP2.12□□□□□ -2.07
SEC28YIL076W SAM4Q08985 325 aaKnown RBP2.12□□□□□ -2.07
SEC28YIL076W YRF1-3P0CX14 1859 aa2.11□□□□□ -2.07
SEC28YIL076W YRF1-7P0CX15 1859 aa2.11□□□□□ -2.07
SEC28YIL076W YRF1-6P53819 1859 aa2.11□□□□□ -2.07
SEC28YIL076W SMI1P32566 505 aa2.11□□□□□ -2.07
SEC28YIL076W MBA1P38300 278 aa2.11□□□□□ -2.07
SEC28YIL076W APE4P38821 490 aa2.11□□□□□ -2.07
SEC28YIL076W NAS2P40555 220 aa2.11□□□□□ -2.07
SEC28YIL076W TPN1P53099 579 aa2.11□□□□□ -2.07
SEC28YIL076W SWC4P53201 476 aa2.11□□□□□ -2.07
SEC28YIL076W TVP15Q03860 143 aa2.11□□□□□ -2.07
SEC28YIL076W YRF1-2P40105 1681 aa2.1□□□□□ -2.07
SEC28YIL076W BAT2P47176 376 aaKnown RBP2.1□□□□□ -2.07
SEC28YIL076W MRS2Q01926 470 aa2.1□□□□□ -2.07
SEC28YIL076W PBP4Q07362 185 aaKnown RBP2.1□□□□□ -2.07
SEC28YIL076W ATG5Q12380 294 aa2.1□□□□□ -2.07
SEC28YIL076W AGC1Q12482 902 aa2.1□□□□□ -2.07
SEC28YIL076W URB1P34241 1764 aaKnown RBP2.1□□□□□ -2.07
SEC28YIL076W VPH1P32563 840 aaKnown RBP2.09□□□□□ -2.07
SEC28YIL076W YJR141WP47172 347 aaPredicted RBP2.09□□□□□ -2.07
SEC28YIL076W YJR146WP47174 117 aa2.09□□□□□ -2.07
SEC28YIL076W SWT21P53873 357 aaPredicted RBP2.09□□□□□ -2.07
SEC28YIL076W YMR166CQ03829 368 aa2.09□□□□□ -2.07
SEC28YIL076W YLL007CQ07799 665 aa2.09□□□□□ -2.07
SEC28YIL076W TY4B-HP0C2J7 1802 aa2.09□□□□□ -2.08
SEC28YIL076W TY4B-JP47024 1803 aa2.09□□□□□ -2.08
SEC28YIL076W ADE6P38972 1358 aaKnown RBP2.09□□□□□ -2.08
SEC28YIL076W RPL26AP05743 127 aaKnown RBP2.08□□□□□ -2.08
SEC28YIL076W GAL7P08431 366 aa2.08□□□□□ -2.08
SEC28YIL076W UIP5P36137 443 aa2.08□□□□□ -2.08
SEC28YIL076W GDS1P41913 522 aa2.08□□□□□ -2.08
SEC28YIL076W RPL26BP53221 127 aaKnown RBP2.08□□□□□ -2.08
SEC28YIL076W SUE1Q06524 206 aa2.08□□□□□ -2.08
SEC28YIL076W TY3A-GQ12173 290 aa2.08□□□□□ -2.08
SEC28YIL076W TY3A-IQ99219 290 aa2.08□□□□□ -2.08
SEC28YIL076W IZH4Q99393 312 aa2.08□□□□□ -2.08
SEC28YIL076W RPL31AP0C2H8 113 aaKnown RBP2.07□□□□□ -2.08
SEC28YIL076W COY1P34237 679 aa2.07□□□□□ -2.08
SEC28YIL076W SPL2P38839 148 aa2.07□□□□□ -2.08
SEC28YIL076W FET3P38993 636 aa2.07□□□□□ -2.08
SEC28YIL076W AIM20P40451 204 aa2.07□□□□□ -2.08
SEC28YIL076W AVT7P40501 490 aa2.07□□□□□ -2.08
SEC28YIL076W DAN1P47178 298 aa2.07□□□□□ -2.08
SEC28YIL076W OST3P48439 350 aa2.07□□□□□ -2.08
SEC28YIL076W CTS2Q06350 511 aa2.07□□□□□ -2.08
SEC28YIL076W TAZ1Q06510 381 aa2.07□□□□□ -2.08
SEC28YIL076W APC9Q12107 265 aa2.07□□□□□ -2.08
SEC28YIL076W YPR1Q12458 312 aa2.07□□□□□ -2.08
SEC28YIL076W FKS3Q04952 1785 aa2.07□□□□□ -2.08
SEC28YIL076W ROM2P51862 1356 aaKnown RBP2.07□□□□□ -2.08
SEC28YIL076W RAD7P06779 565 aa2.06□□□□□ -2.08
SEC28YIL076W OSM1P21375 501 aaKnown RBP2.06□□□□□ -2.08
SEC28YIL076W SUR2P38992 349 aa2.06□□□□□ -2.08
SEC28YIL076W CAB5Q03941 241 aa2.06□□□□□ -2.08
SEC28YIL076W YMR111CQ04461 462 aaPredicted RBP2.06□□□□□ -2.08
SEC28YIL076W FCF1Q05498 189 aaPredicted RBP2.06□□□□□ -2.08
SEC28YIL076W RRP42Q12277 265 aaPredicted RBP2.06□□□□□ -2.08
SEC28YIL076W RSF2P46974 1380 aa2.06□□□□□ -2.08
SEC28YIL076W NRG2P38082 220 aa2.05□□□□□ -2.08
SEC28YIL076W SWC5P38326 303 aa2.05□□□□□ -2.08
SEC28YIL076W CAJ1P39101 391 aa2.05□□□□□ -2.08
SEC28YIL076W GRH1Q04410 372 aaKnown RBP2.05□□□□□ -2.08
SEC28YIL076W PAA1Q12447 191 aaKnown RBP2.05□□□□□ -2.08
SEC28YIL076W YPR064WQ12492 139 aa2.05□□□□□ -2.08
SEC28YIL076W TOM1Q03280 3268 aa2.05□□□□□ -2.08
SEC28YIL076W YIL177CP40434 1758 aa2.05□□□□□ -2.08
SEC28YIL076W YJL225CP40889 1758 aa2.05□□□□□ -2.08
SEC28YIL076W CDC37P06101 506 aaKnown RBP2.04□□□□□ -2.08
SEC28YIL076W SCO1P23833 295 aa2.04□□□□□ -2.08
SEC28YIL076W AEP1P32493 518 aa2.04□□□□□ -2.08
SEC28YIL076W SEN34P39707 275 aa2.04□□□□□ -2.08
SEC28YIL076W RPE1P46969 238 aa2.04□□□□□ -2.08
SEC28YIL076W MYO5Q04439 1219 aaKnown RBP2.04□□□□□ -2.08
SEC28YIL076W DPM1P14020 267 aaKnown RBP2.03□□□□□ -2.08
SEC28YIL076W EAF6P47128 113 aa2.03□□□□□ -2.08
SEC28YIL076W SNF2P22082 1703 aa2.03□□□□□ -2.09
SEC28YIL076W APC1P53886 1748 aa2.03□□□□□ -2.09
SEC28YIL076W SPT7P35177 1332 aa2.02□□□□□ -2.09
SEC28YIL076W RPS24AP0CX31 135 aaKnown RBP2.02□□□□□ -2.09
SEC28YIL076W RPS24BP0CX32 135 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms