RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W YEL009C-AA0A023PZF2 135 aa1.6□□□□□ -2.15
VMA21YGR105W GPI12P23797 304 aa1.6□□□□□ -2.15
VMA21YGR105W NRG2P38082 220 aa1.6□□□□□ -2.15
VMA21YGR105W YDR089WP38966 869 aa1.6□□□□□ -2.15
VMA21YGR105W OSW5P40219 148 aa1.6□□□□□ -2.15
VMA21YGR105W AGP3P43548 558 aa1.6□□□□□ -2.15
VMA21YGR105W BAT2P47176 376 aaKnown RBP1.6□□□□□ -2.15
VMA21YGR105W VPS60Q03390 229 aa1.6□□□□□ -2.15
VMA21YGR105W RRG8Q06109 277 aa1.6□□□□□ -2.15
VMA21YGR105W LOA1Q06508 300 aa1.6□□□□□ -2.15
VMA21YGR105W RTC5Q12108 567 aaKnown RBP1.6□□□□□ -2.15
VMA21YGR105W GCD2P12754 651 aaPredicted RBP1.59□□□□□ -2.15
VMA21YGR105W OPI1P21957 404 aa1.59□□□□□ -2.15
VMA21YGR105W ARN2P38724 620 aa1.59□□□□□ -2.15
VMA21YGR105W MNN9P39107 395 aaKnown RBP1.59□□□□□ -2.15
VMA21YGR105W YHR086W-AQ3E746 53 aa1.59□□□□□ -2.15
VMA21YGR105W YMR316C-AI2HB70 103 aa1.58□□□□□ -2.16
VMA21YGR105W SCO1P23833 295 aa1.58□□□□□ -2.16
VMA21YGR105W CSG2P35206 410 aa1.58□□□□□ -2.16
VMA21YGR105W RPC25P35718 212 aa1.58□□□□□ -2.16
VMA21YGR105W POP2P39008 433 aa1.58□□□□□ -2.16
VMA21YGR105W MND1P53102 219 aa1.58□□□□□ -2.16
VMA21YGR105W CAB4P53332 305 aa1.58□□□□□ -2.16
VMA21YGR105W ECM18Q04623 453 aa1.58□□□□□ -2.16
VMA21YGR105W REX3Q12090 404 aa1.58□□□□□ -2.16
VMA21YGR105W NOT5Q12514 560 aaPredicted RBP1.58□□□□□ -2.16
VMA21YGR105W CSM1P25651 190 aa1.57□□□□□ -2.16
VMA21YGR105W HMT1P38074 348 aa1.57□□□□□ -2.16
VMA21YGR105W TDA11P38854 504 aa1.57□□□□□ -2.16
VMA21YGR105W GON7P46984 123 aa1.57□□□□□ -2.16
VMA21YGR105W COS6P53344 381 aa1.57□□□□□ -2.16
VMA21YGR105W GPN3Q06543 272 aa1.57□□□□□ -2.16
VMA21YGR105W ILV1P00927 576 aaKnown RBP1.56□□□□□ -2.16
VMA21YGR105W BMH1P29311 267 aaKnown RBP1.56□□□□□ -2.16
VMA21YGR105W CAM1P29547 415 aaKnown RBP1.56□□□□□ -2.16
VMA21YGR105W HIS2P38635 335 aa1.56□□□□□ -2.16
VMA21YGR105W YHR045WP38775 560 aa1.56□□□□□ -2.16
VMA21YGR105W FCY21P40039 528 aa1.56□□□□□ -2.16
VMA21YGR105W COG3P40094 801 aa1.56□□□□□ -2.16
VMA21YGR105W IBA57P47158 497 aa1.56□□□□□ -2.16
VMA21YGR105W KEL2P50090 882 aa1.56□□□□□ -2.16
VMA21YGR105W PEX31P53203 462 aa1.56□□□□□ -2.16
VMA21YGR105W SDC1Q03323 175 aa1.56□□□□□ -2.16
VMA21YGR105W DCR2Q05924 578 aa1.56□□□□□ -2.16
VMA21YGR105W BER1Q06688 274 aaKnown RBP1.56□□□□□ -2.16
VMA21YGR105W TDH1P00360 332 aaKnown RBP1.55□□□□□ -2.16
VMA21YGR105W GRE3P38715 327 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
VMA21YGR105W YHI9P38765 294 aa1.55□□□□□ -2.16
VMA21YGR105W YJL027CP47063 138 aaPredicted RBP1.55□□□□□ -2.16
VMA21YGR105W YMR114CQ04471 368 aaKnown RBP1.55□□□□□ -2.16
VMA21YGR105W STF1P01098 86 aa1.54□□□□□ -2.16
VMA21YGR105W RPS3P05750 240 aaKnown RBP1.54□□□□□ -2.16
VMA21YGR105W DPB2P24482 689 aaPredicted RBP1.54□□□□□ -2.16
VMA21YGR105W YJL016WP47072 561 aa1.54□□□□□ -2.16
VMA21YGR105W NIF3P53081 288 aa1.54□□□□□ -2.16
VMA21YGR105W CPD1P53314 239 aa1.54□□□□□ -2.16
VMA21YGR105W MDY2Q12285 212 aa1.54□□□□□ -2.16
VMA21YGR105W YPL247CQ12523 523 aa1.54□□□□□ -2.16
VMA21YGR105W COS2P0CX12 379 aa1.53□□□□□ -2.16
VMA21YGR105W COS3P0CX13 379 aa1.53□□□□□ -2.16
VMA21YGR105W ICL1P28240 557 aaPredicted RBP1.53□□□□□ -2.16
VMA21YGR105W SFC1P33303 322 aa1.53□□□□□ -2.16
VMA21YGR105W GDH2P33327 1092 aaKnown RBP1.53□□□□□ -2.16
VMA21YGR105W SER33P40510 469 aa1.53□□□□□ -2.16
VMA21YGR105W MRPL49P40858 161 aaPredicted RBP1.53□□□□□ -2.16
VMA21YGR105W LOC1P43586 204 aaPredicted RBP1.53□□□□□ -2.16
VMA21YGR105W EMC6Q12431 108 aa1.53□□□□□ -2.16
VMA21YGR105W YAL064W-BO13512 126 aa1.52□□□□□ -2.17
VMA21YGR105W ADH3P07246 375 aaKnown RBP1.52□□□□□ -2.17
VMA21YGR105W UGA1P17649 471 aa1.52□□□□□ -2.17
VMA21YGR105W SPT8P38915 602 aa1.52□□□□□ -2.17
VMA21YGR105W VPS45P38932 577 aa1.52□□□□□ -2.17
VMA21YGR105W MDM34P53083 459 aa1.52□□□□□ -2.17
VMA21YGR105W PNC1P53184 216 aaKnown RBP1.52□□□□□ -2.17
VMA21YGR105W SPO19Q03029 223 aa1.52□□□□□ -2.17
VMA21YGR105W SFH1Q06168 426 aa1.52□□□□□ -2.17
VMA21YGR105W GEP5Q12393 293 aa1.52□□□□□ -2.17
VMA21YGR105W KRR1P25586 316 aaPredicted RBP1.51□□□□□ -2.17
VMA21YGR105W YCR102CP25608 368 aa1.51□□□□□ -2.17
VMA21YGR105W YOR062CP36025 268 aa1.51□□□□□ -2.17
VMA21YGR105W YHL026CP38740 315 aa1.51□□□□□ -2.17
VMA21YGR105W NPT1P39683 429 aaKnown RBP1.51□□□□□ -2.17
VMA21YGR105W GCD14P46959 383 aaPredicted RBP1.51□□□□□ -2.17
VMA21YGR105W YJL028WP47062 111 aa1.51□□□□□ -2.17
VMA21YGR105W CDC14Q00684 551 aa1.51□□□□□ -2.17
VMA21YGR105W VBA1Q04301 562 aa1.51□□□□□ -2.17
VMA21YGR105W SEC10Q06245 871 aa1.51□□□□□ -2.17
VMA21YGR105W PEX3P28795 441 aa1.5□□□□□ -2.17
VMA21YGR105W TAD2P47058 250 aa1.5□□□□□ -2.17
VMA21YGR105W YGL185CP53100 379 aa1.5□□□□□ -2.17
VMA21YGR105W YNL260CP53846 198 aa1.5□□□□□ -2.17
VMA21YGR105W ATC1Q04005 294 aa1.5□□□□□ -2.17
VMA21YGR105W BCP1Q06338 283 aa1.5□□□□□ -2.17
VMA21YGR105W SMT3Q12306 101 aaKnown RBP1.5□□□□□ -2.17
VMA21YGR105W AI5_BETAQ9ZZX0 354 aa1.5□□□□□ -2.17
VMA21YGR105W RPP0P05317 312 aaKnown RBP1.49□□□□□ -2.17
VMA21YGR105W RPC40P07703 335 aaKnown RBP1.49□□□□□ -2.17
VMA21YGR105W RPL4AP10664 362 aaKnown RBP1.49□□□□□ -2.17
VMA21YGR105W FRS2P15625 503 aaKnown RBP1.49□□□□□ -2.17
VMA21YGR105W PPH21P23594 369 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms