RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C MDH3P32419 343 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
SWC4YGR002C IMP3P32899 183 aaPredicted RBP2.58□□□□□ -2
SWC4YGR002C ANR2P36090 516 aaPredicted RBP2.58□□□□□ -2
SWC4YGR002C MRPL24P36525 258 aaPredicted RBP2.58□□□□□ -2
SWC4YGR002C YBR056WP38081 501 aa2.58□□□□□ -2
SWC4YGR002C SWD3P38123 315 aa2.58□□□□□ -2
SWC4YGR002C PFF1P38244 976 aa2.58□□□□□ -2
SWC4YGR002C DER1P38307 211 aa2.58□□□□□ -2
SWC4YGR002C COS8P38723 381 aa2.58□□□□□ -2
SWC4YGR002C WSC4P38739 605 aa2.58□□□□□ -2
SWC4YGR002C PCF11P39081 626 aaPredicted RBP2.58□□□□□ -2
SWC4YGR002C YKE4P40544 346 aa2.58□□□□□ -2
SWC4YGR002C RPC17P47076 161 aa2.58□□□□□ -2
SWC4YGR002C BIO3P50277 480 aa2.58□□□□□ -2
SWC4YGR002C SHY1P53266 389 aa2.58□□□□□ -2
SWC4YGR002C YIP3P53633 176 aa2.58□□□□□ -2
SWC4YGR002C YNL140CP53910 189 aa2.58□□□□□ -2
SWC4YGR002C COG5P53951 403 aa2.58□□□□□ -2
SWC4YGR002C YNL040WP53960 456 aaPredicted RBP2.58□□□□□ -2
SWC4YGR002C YLR460CP54007 376 aa2.58□□□□□ -2
SWC4YGR002C TMA20P89886 181 aaPredicted RBP2.58□□□□□ -2
SWC4YGR002C SNO1Q03144 224 aa2.58□□□□□ -2
SWC4YGR002C HER2Q03557 464 aa2.58□□□□□ -2
SWC4YGR002C TRM82Q03774 444 aa2.58□□□□□ -2
SWC4YGR002C PKR1Q03880 122 aaKnown RBP2.58□□□□□ -2
SWC4YGR002C HRI1Q05905 244 aaKnown RBP2.58□□□□□ -2
SWC4YGR002C POM33Q12164 279 aa2.58□□□□□ -2
SWC4YGR002C YIR021W-AQ3E739 70 aa2.58□□□□□ -2
SWC4YGR002C RPS28AQ3E7X9 67 aaPredicted RBP2.58□□□□□ -2
SWC4YGR002C COX2P00410 251 aa2.57□□□□□ -2
SWC4YGR002C CYC3P06182 269 aa2.57□□□□□ -2
SWC4YGR002C PUT1P09368 476 aa2.57□□□□□ -2
SWC4YGR002C RPS24AP0CX31 135 aaKnown RBP2.57□□□□□ -2
SWC4YGR002C RPS24BP0CX32 135 aaKnown RBP2.57□□□□□ -2
SWC4YGR002C RPS8AP0CX39 200 aaKnown RBP2.57□□□□□ -2
SWC4YGR002C RPS8BP0CX40 200 aaKnown RBP2.57□□□□□ -2
SWC4YGR002C NAM2P11325 894 aa2.57□□□□□ -2
SWC4YGR002C DPM1P14020 267 aaKnown RBP2.57□□□□□ -2
SWC4YGR002C PRE7P23724 241 aaKnown RBP2.57□□□□□ -2
SWC4YGR002C SPT10P35208 640 aa2.57□□□□□ -2
SWC4YGR002C CBT1P36038 271 aaPredicted RBP2.57□□□□□ -2
SWC4YGR002C MRPL15P36523 253 aa2.57□□□□□ -2
SWC4YGR002C LDB7P38210 180 aa2.57□□□□□ -2
SWC4YGR002C IML3P38265 245 aa2.57□□□□□ -2
SWC4YGR002C EFM1P38732 585 aa2.57□□□□□ -2
SWC4YGR002C SBE22P38814 852 aa2.57□□□□□ -2
SWC4YGR002C TDA11P38854 504 aa2.57□□□□□ -2
SWC4YGR002C IKI1P38874 309 aa2.57□□□□□ -2
SWC4YGR002C FAD1P38913 306 aa2.57□□□□□ -2
SWC4YGR002C YER121WP40076 114 aa2.57□□□□□ -2
SWC4YGR002C BTT1P40314 149 aaPredicted RBP2.57□□□□□ -2
SWC4YGR002C PAN6P40459 309 aa2.57□□□□□ -2
SWC4YGR002C MAM33P40513 266 aa2.57□□□□□ -2
SWC4YGR002C REE1P40893 198 aa2.57□□□□□ -2
SWC4YGR002C GDS1P41913 522 aa2.57□□□□□ -2
SWC4YGR002C SFH5P47008 294 aa2.57□□□□□ -2
SWC4YGR002C YJL016WP47072 561 aa2.57□□□□□ -2
SWC4YGR002C RBL2P48606 106 aaKnown RBP2.57□□□□□ -2
SWC4YGR002C NOP19P53317 196 aaPredicted RBP2.57□□□□□ -2
SWC4YGR002C MTM1P53320 366 aa2.57□□□□□ -2
SWC4YGR002C YPL113CQ02961 396 aa2.57□□□□□ -2
SWC4YGR002C YDR476CQ03362 224 aa2.57□□□□□ -2
SWC4YGR002C NHP10Q03435 203 aa2.57□□□□□ -2
SWC4YGR002C YMR027WQ04371 470 aa2.57□□□□□ -2
SWC4YGR002C YMR253CQ04835 414 aa2.57□□□□□ -2
SWC4YGR002C BUR2Q05949 395 aa2.57□□□□□ -2
SWC4YGR002C NEJ1Q06148 342 aa2.57□□□□□ -2
SWC4YGR002C SUE1Q06524 206 aa2.57□□□□□ -2
SWC4YGR002C LDB18Q07887 179 aa2.57□□□□□ -2
SWC4YGR002C HRD1Q08109 551 aa2.57□□□□□ -2
SWC4YGR002C UIP4Q08926 304 aa2.57□□□□□ -2
SWC4YGR002C FCY22Q12119 530 aa2.57□□□□□ -2
SWC4YGR002C YCT1Q12235 531 aa2.57□□□□□ -2
SWC4YGR002C RUP1Q12242 671 aa2.57□□□□□ -2
SWC4YGR002C HRT3Q12347 344 aa2.57□□□□□ -2
SWC4YGR002C RGS2Q99188 309 aa2.57□□□□□ -2
SWC4YGR002C RPS1BP23248 255 aaKnown RBP2.56□□□□□ -2
SWC4YGR002C YEL045CP32616 141 aa2.56□□□□□ -2
SWC4YGR002C SKT5P34226 696 aa2.56□□□□□ -2
SWC4YGR002C ASC1P38011 319 aaKnown RBP2.56□□□□□ -2
SWC4YGR002C YPT31P38555 223 aaKnown RBP2.56□□□□□ -2
SWC4YGR002C VMA7P39111 118 aa2.56□□□□□ -2
SWC4YGR002C RBG1P39729 369 aa2.56□□□□□ -2
SWC4YGR002C ERG28P40030 148 aa2.56□□□□□ -2
SWC4YGR002C DDI1P40087 428 aa2.56□□□□□ -2
SWC4YGR002C RRG9P40156 214 aa2.56□□□□□ -2
SWC4YGR002C VHS2P40463 436 aa2.56□□□□□ -2
SWC4YGR002C LYS12P40495 371 aaKnown RBP2.56□□□□□ -2
SWC4YGR002C CIN2P46670 268 aa2.56□□□□□ -2
SWC4YGR002C GPI14P47088 403 aaKnown RBP2.56□□□□□ -2
SWC4YGR002C JHD2P47156 728 aaPredicted RBP2.56□□□□□ -2
SWC4YGR002C YPT32P51996 222 aaKnown RBP2.56□□□□□ -2
SWC4YGR002C CWC23P52868 283 aaPredicted RBP2.56□□□□□ -2
SWC4YGR002C YGL235WP53071 178 aa2.56□□□□□ -2
SWC4YGR002C YMR279CQ03263 540 aa2.56□□□□□ -2
SWC4YGR002C GPI17Q04080 534 aa2.56□□□□□ -2
SWC4YGR002C AIM33Q04516 312 aa2.56□□□□□ -2
SWC4YGR002C YDR278CQ05612 105 aa2.56□□□□□ -2
SWC4YGR002C SNT309Q06091 175 aaPredicted RBP2.56□□□□□ -2
SWC4YGR002C NKP2Q06162 153 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms