RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W ELA1P53861 379 aaPredicted RBP5.96□□□□□ -1.46
NUP49YGL172W ASI3P53983 676 aa5.96□□□□□ -1.46
NUP49YGL172W RBS1Q05672 457 aaKnown RBP5.96□□□□□ -1.46
NUP49YGL172W RAF1Q06891 181 aa5.96□□□□□ -1.46
NUP49YGL172W SYC1Q08553 188 aaPredicted RBP5.96□□□□□ -1.46
NUP49YGL172W FRE5Q08908 694 aa5.96□□□□□ -1.46
NUP49YGL172W THP3Q12049 470 aaKnown RBP5.96□□□□□ -1.46
NUP49YGL172W RTC5Q12108 567 aaKnown RBP5.96□□□□□ -1.46
NUP49YGL172W FOL3Q12676 427 aaPredicted RBP5.96□□□□□ -1.46
NUP49YGL172W MEC1P38111 2368 aa5.95□□□□□ -1.46
NUP49YGL172W RPL43AP0CX25 92 aaKnown RBP5.95□□□□□ -1.46
NUP49YGL172W RPL43BP0CX26 92 aa5.95□□□□□ -1.46
NUP49YGL172W DAL3P32459 195 aa5.95□□□□□ -1.46
NUP49YGL172W NVJ1P38881 321 aa5.95□□□□□ -1.46
NUP49YGL172W PFS2P42841 465 aaKnown RBP5.95□□□□□ -1.46
NUP49YGL172W IRC5P43610 853 aa5.95□□□□□ -1.46
NUP49YGL172W RBL2P48606 106 aaKnown RBP5.95□□□□□ -1.46
NUP49YGL172W MRPL19P53875 158 aa5.95□□□□□ -1.46
NUP49YGL172W PET191Q02772 108 aa5.95□□□□□ -1.46
NUP49YGL172W RVB1Q03940 463 aaKnown RBP5.95□□□□□ -1.46
NUP49YGL172W YDR514CQ04408 483 aa5.95□□□□□ -1.46
NUP49YGL172W MRX8Q05473 314 aa5.95□□□□□ -1.46
NUP49YGL172W CRR1Q05790 422 aa5.95□□□□□ -1.46
NUP49YGL172W NNT1Q05874 261 aa5.95□□□□□ -1.46
NUP49YGL172W IPK1Q06667 281 aa5.95□□□□□ -1.46
NUP49YGL172W ACF2Q12168 779 aa5.95□□□□□ -1.46
NUP49YGL172W TY1A-BLQ12266 440 aa5.95□□□□□ -1.46
NUP49YGL172W YOL114CQ12322 202 aa5.95□□□□□ -1.46
NUP49YGL172W RTN2Q12443 393 aa5.95□□□□□ -1.46
NUP49YGL172W HEM4P06174 275 aa5.94□□□□□ -1.46
NUP49YGL172W PRB1P09232 635 aa5.94□□□□□ -1.46
NUP49YGL172W RPS16AP0CX51 143 aaKnown RBP5.94□□□□□ -1.46
NUP49YGL172W RPS16BP0CX52 143 aaKnown RBP5.94□□□□□ -1.46
NUP49YGL172W HMG1P12683 1054 aa5.94□□□□□ -1.46
NUP49YGL172W MRPS28P21771 286 aa5.94□□□□□ -1.46
NUP49YGL172W EXG1P23776 448 aaKnown RBP5.94□□□□□ -1.46
NUP49YGL172W SED4P25365 1065 aa5.94□□□□□ -1.46
NUP49YGL172W BOS1P25385 244 aa5.94□□□□□ -1.46
NUP49YGL172W PUT3P25502 979 aaPredicted RBP5.94□□□□□ -1.46
NUP49YGL172W ARO7P32178 256 aa5.94□□□□□ -1.46
NUP49YGL172W PUB1P32588 453 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
NUP49YGL172W THI2P38141 450 aa5.94□□□□□ -1.46
NUP49YGL172W IDP2P41939 412 aa5.94□□□□□ -1.46
NUP49YGL172W YNL092WP53934 400 aa5.94□□□□□ -1.46
NUP49YGL172W SSY1Q03770 852 aa5.94□□□□□ -1.46
NUP49YGL172W MEK1P24719 497 aaPredicted RBP5.93□□□□□ -1.46
NUP49YGL172W KRE6P32486 720 aa5.93□□□□□ -1.46
NUP49YGL172W YKR015CP36111 568 aa5.93□□□□□ -1.46
NUP49YGL172W YPK3P38070 525 aa5.93□□□□□ -1.46
NUP49YGL172W DDI1P40087 428 aa5.93□□□□□ -1.46
NUP49YGL172W SLZ1P40167 298 aa5.93□□□□□ -1.46
NUP49YGL172W PAM16P42949 149 aa5.93□□□□□ -1.46
NUP49YGL172W NIT3P49954 291 aa5.93□□□□□ -1.46
NUP49YGL172W RMD9P53140 646 aaKnown RBP5.93□□□□□ -1.46
NUP49YGL172W PCP1P53259 346 aa5.93□□□□□ -1.46
NUP49YGL172W PAU12P53343 120 aa5.93□□□□□ -1.46
NUP49YGL172W YAP6Q03935 383 aa5.93□□□□□ -1.46
NUP49YGL172W MCH4Q08268 501 aa5.93□□□□□ -1.46
NUP49YGL172W TY1A-NL1Q12391 440 aaKnown RBP5.93□□□□□ -1.46
NUP49YGL172W YPR1Q12458 312 aa5.93□□□□□ -1.46
NUP49YGL172W BLM10P43583 2143 aa5.93□□□□□ -1.46
NUP49YGL172W CDC36P06100 191 aaPredicted RBP5.92□□□□□ -1.46
NUP49YGL172W PDE2P06776 526 aa5.92□□□□□ -1.46
NUP49YGL172W RPL24BP24000 155 aaKnown RBP5.92□□□□□ -1.46
NUP49YGL172W PCL1P24867 279 aa5.92□□□□□ -1.46
NUP49YGL172W ITR1P30605 584 aa5.92□□□□□ -1.46
NUP49YGL172W FUN26P31381 517 aa5.92□□□□□ -1.46
NUP49YGL172W SEN34P39707 275 aa5.92□□□□□ -1.46
NUP49YGL172W TIR3P40552 269 aa5.92□□□□□ -1.46
NUP49YGL172W MKC7P53379 596 aa5.92□□□□□ -1.46
NUP49YGL172W AIM36Q03798 255 aa5.92□□□□□ -1.46
NUP49YGL172W YMR252CQ04814 134 aa5.92□□□□□ -1.46
NUP49YGL172W MDM36Q06820 579 aa5.92□□□□□ -1.46
NUP49YGL172W ENV7Q12003 364 aa5.92□□□□□ -1.46
NUP49YGL172W YEL009C-AA0A023PZF2 135 aa5.91□□□□□ -1.46
NUP49YGL172W SCEIP03882 235 aa5.91□□□□□ -1.46
NUP49YGL172W DBF2P22204 572 aa5.91□□□□□ -1.46
NUP49YGL172W ATG15P25641 520 aa5.91□□□□□ -1.46
NUP49YGL172W MRPS5P33759 307 aa5.91□□□□□ -1.46
NUP49YGL172W SPT10P35208 640 aa5.91□□□□□ -1.46
NUP49YGL172W ANR2P36090 516 aaPredicted RBP5.91□□□□□ -1.46
NUP49YGL172W PAU24P38155 120 aa5.91□□□□□ -1.46
NUP49YGL172W SCW11P53189 542 aa5.91□□□□□ -1.46
NUP49YGL172W RCE1Q03530 315 aa5.91□□□□□ -1.46
NUP49YGL172W MGR3Q04472 501 aa5.91□□□□□ -1.46
NUP49YGL172W RCN2Q12044 265 aa5.91□□□□□ -1.46
NUP49YGL172W MCT1Q12283 360 aa5.91□□□□□ -1.46
NUP49YGL172W RRI1Q12468 440 aa5.91□□□□□ -1.46
NUP49YGL172W FRE6Q12473 712 aa5.91□□□□□ -1.46
NUP49YGL172W SEC16P48415 2195 aaKnown RBP5.91□□□□□ -1.46
NUP49YGL172W SSA3P09435 649 aaKnown RBP5.91□□□□□ -1.46
NUP49YGL172W AHC2P25649 128 aa5.91□□□□□ -1.46
NUP49YGL172W VPS17P32913 551 aa5.91□□□□□ -1.46
NUP49YGL172W PEX32P38292 413 aa5.91□□□□□ -1.46
NUP49YGL172W PCL6P40038 420 aa5.91□□□□□ -1.46
NUP49YGL172W PMT6P42934 759 aa5.91□□□□□ -1.46
NUP49YGL172W MOB2P43563 287 aa5.91□□□□□ -1.46
NUP49YGL172W CCC1P47818 322 aa5.91□□□□□ -1.46
NUP49YGL172W YGR045CP53229 120 aa5.91□□□□□ -1.46
NUP49YGL172W TNA1P53322 534 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms