RNA–Protein interactions for RNA: YGL056C

SDS23, Transcript of Protein involved in cell separation during budding, yeastyeast

Gene SDS23, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS23YGL056C YNL040WP53960 456 aaPredicted RBP3.14□□□□□ -1.91
SDS23YGL056C MRS2Q01926 470 aa3.14□□□□□ -1.91
SDS23YGL056C FSH2Q05015 223 aa3.14□□□□□ -1.91
SDS23YGL056C YLR283WQ05867 314 aa3.14□□□□□ -1.91
SDS23YGL056C HRI1Q05905 244 aaKnown RBP3.14□□□□□ -1.91
SDS23YGL056C FAR10Q06001 478 aa3.14□□□□□ -1.91
SDS23YGL056C NDD1Q08887 554 aa3.14□□□□□ -1.91
SDS23YGL056C SFM1Q12314 213 aa3.14□□□□□ -1.91
SDS23YGL056C HMS1Q12398 434 aa3.14□□□□□ -1.91
SDS23YGL056C NAG1Q8TGN9 163 aa3.14□□□□□ -1.91
SDS23YGL056C HHF1P02309 103 aaKnown RBP3.13□□□□□ -1.91
SDS23YGL056C TCP1P12612 559 aaKnown RBP3.13□□□□□ -1.91
SDS23YGL056C TFS1P14306 219 aa3.13□□□□□ -1.91
SDS23YGL056C VPS3P23643 1011 aa3.13□□□□□ -1.91
SDS23YGL056C POF1P25576 258 aa3.13□□□□□ -1.91
SDS23YGL056C RPS5P26783 225 aaKnown RBP3.13□□□□□ -1.91
SDS23YGL056C DEP1P31385 405 aa3.13□□□□□ -1.91
SDS23YGL056C CYM1P32898 989 aa3.13□□□□□ -1.91
SDS23YGL056C YBL059WP34224 193 aa3.13□□□□□ -1.91
SDS23YGL056C LDB7P38210 180 aa3.13□□□□□ -1.91
SDS23YGL056C SIP3P38717 1229 aa3.13□□□□□ -1.91
SDS23YGL056C GAA1P39012 614 aa3.13□□□□□ -1.91
SDS23YGL056C NPT1P39683 429 aaKnown RBP3.13□□□□□ -1.91
SDS23YGL056C NBP1P52919 319 aaPredicted RBP3.13□□□□□ -1.91
SDS23YGL056C PGA2P53903 129 aa3.13□□□□□ -1.91
SDS23YGL056C GAS2Q06135 555 aa3.13□□□□□ -1.91
SDS23YGL056C RSA1Q08932 381 aa3.13□□□□□ -1.91
SDS23YGL056C JID1Q12350 301 aa3.13□□□□□ -1.91
SDS23YGL056C YPR064WQ12492 139 aa3.13□□□□□ -1.91
SDS23YGL056C MOT1P32333 1867 aa3.13□□□□□ -1.91
SDS23YGL056C ECM29P38737 1868 aa3.13□□□□□ -1.91
SDS23YGL056C HIS1P00498 297 aaKnown RBP3.12□□□□□ -1.91
SDS23YGL056C MRP1P10662 321 aaKnown RBP3.12□□□□□ -1.91
SDS23YGL056C SPT15P13393 240 aaKnown RBP3.12□□□□□ -1.91
SDS23YGL056C INO2P26798 304 aa3.12□□□□□ -1.91
SDS23YGL056C IES6P32617 166 aa3.12□□□□□ -1.91
SDS23YGL056C SPT4P32914 102 aaPredicted RBP3.12□□□□□ -1.91
SDS23YGL056C CSE1P33307 960 aa3.12□□□□□ -1.91
SDS23YGL056C AIM10P39965 576 aaKnown RBP3.12□□□□□ -1.91
SDS23YGL056C YAT2P40017 923 aa3.12□□□□□ -1.91
SDS23YGL056C DDI1P40087 428 aa3.12□□□□□ -1.91
SDS23YGL056C YER186CP40101 306 aa3.12□□□□□ -1.91
SDS23YGL056C TAD2P47058 250 aa3.12□□□□□ -1.91
SDS23YGL056C PRP38Q00723 242 aaPredicted RBP3.12□□□□□ -1.91
SDS23YGL056C SKI8Q02793 397 aaPredicted RBP3.12□□□□□ -1.91
SDS23YGL056C YLR446WQ06204 433 aa3.12□□□□□ -1.91
SDS23YGL056C RRP42Q12277 265 aaPredicted RBP3.12□□□□□ -1.91
SDS23YGL056C LAA1P39526 2014 aa3.12□□□□□ -1.91
SDS23YGL056C PHO2P07269 559 aa3.12□□□□□ -1.91
SDS23YGL056C ISY1P21374 235 aaPredicted RBP3.12□□□□□ -1.91
SDS23YGL056C GIT1P25346 518 aa3.12□□□□□ -1.91
SDS23YGL056C NAM9P27929 486 aa3.12□□□□□ -1.91
SDS23YGL056C LDS1P31379 325 aa3.12□□□□□ -1.91
SDS23YGL056C CBF5P33322 483 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
SDS23YGL056C YBR062CP38239 180 aa3.12□□□□□ -1.91
SDS23YGL056C BAT1P38891 393 aaKnown RBP3.12□□□□□ -1.91
SDS23YGL056C RPC17P47076 161 aa3.12□□□□□ -1.91
SDS23YGL056C LIF1P53150 421 aa3.12□□□□□ -1.91
SDS23YGL056C NOP13P53883 403 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
SDS23YGL056C RPL22BP56628 122 aaKnown RBP3.12□□□□□ -1.91
SDS23YGL056C SLT2Q00772 484 aa3.12□□□□□ -1.91
SDS23YGL056C ENT5Q03769 411 aaKnown RBP3.12□□□□□ -1.91
SDS23YGL056C DTD1Q07648 150 aaKnown RBP3.12□□□□□ -1.91
SDS23YGL056C MIM1Q08176 113 aa3.12□□□□□ -1.91
SDS23YGL056C YOR376WQ08900 122 aa3.12□□□□□ -1.91
SDS23YGL056C YMR230W-AQ3E7B5 62 aa3.12□□□□□ -1.91
SDS23YGL056C CDC36P06100 191 aaPredicted RBP3.11□□□□□ -1.91
SDS23YGL056C URA10P30402 227 aa3.11□□□□□ -1.91
SDS23YGL056C FMP46P36141 133 aaKnown RBP3.11□□□□□ -1.91
SDS23YGL056C SDS24P38314 527 aa3.11□□□□□ -1.91
SDS23YGL056C ATG12P38316 186 aa3.11□□□□□ -1.91
SDS23YGL056C PRS2P38620 318 aaKnown RBP3.11□□□□□ -1.91
SDS23YGL056C VAB2P40003 282 aa3.11□□□□□ -1.91
SDS23YGL056C HMF1P40037 129 aaKnown RBP3.11□□□□□ -1.91
SDS23YGL056C YJR054WP47114 497 aa3.11□□□□□ -1.91
SDS23YGL056C YPT32P51996 222 aaKnown RBP3.11□□□□□ -1.91
SDS23YGL056C GMC1Q04399 608 aa3.11□□□□□ -1.91
SDS23YGL056C GTO3Q04806 366 aa3.11□□□□□ -1.91
SDS23YGL056C IRC25Q07951 179 aa3.11□□□□□ -1.91
SDS23YGL056C YOR114WQ12219 294 aa3.11□□□□□ -1.91
SDS23YGL056C FLO11P08640 1367 aa3.11□□□□□ -1.91
SDS23YGL056C RHO1P06780 209 aaKnown RBP3.1□□□□□ -1.91
SDS23YGL056C MRPL20P22354 195 aaPredicted RBP3.1□□□□□ -1.91
SDS23YGL056C CDC10P25342 322 aaKnown RBP3.1□□□□□ -1.91
SDS23YGL056C ARO2P28777 376 aaKnown RBP3.1□□□□□ -1.91
SDS23YGL056C AIM29P36154 155 aa3.1□□□□□ -1.91
SDS23YGL056C PFS1P38872 237 aa3.1□□□□□ -1.91
SDS23YGL056C OXA1P39952 402 aa3.1□□□□□ -1.91
SDS23YGL056C YER184CP39961 794 aa3.1□□□□□ -1.91
SDS23YGL056C ALD5P40047 520 aaKnown RBP3.1□□□□□ -1.91
SDS23YGL056C TPN1P53099 579 aa3.1□□□□□ -1.91
SDS23YGL056C PEX31P53203 462 aa3.1□□□□□ -1.91
SDS23YGL056C MRPL50P53724 139 aa3.1□□□□□ -1.91
SDS23YGL056C TRM44Q02648 567 aaKnown RBP3.1□□□□□ -1.91
SDS23YGL056C YMR114CQ04471 368 aaKnown RBP3.1□□□□□ -1.91
SDS23YGL056C SFH1Q06168 426 aa3.1□□□□□ -1.91
SDS23YGL056C PEX30Q06169 523 aa3.1□□□□□ -1.91
SDS23YGL056C YLR177WQ06251 628 aa3.1□□□□□ -1.91
SDS23YGL056C RPN8Q08723 338 aaKnown RBP3.1□□□□□ -1.91
SDS23YGL056C YKL068W-AQ3E826 78 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms