RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W CDD1Q06549 142 aa2□□□□□ -2.09
LOC1YFR001W YNL050CP53952 270 aa1.99□□□□□ -2.09
LOC1YFR001W YPL039WQ03080 316 aa1.99□□□□□ -2.09
LOC1YFR001W YPL150WQ12152 901 aa1.99□□□□□ -2.09
LOC1YFR001W YBL112CQ3E7Y4 105 aa1.99□□□□□ -2.09
LOC1YFR001W YMR316C-AI2HB70 103 aa1.98□□□□□ -2.09
LOC1YFR001W TDH1P00360 332 aaKnown RBP1.98□□□□□ -2.09
LOC1YFR001W RPS3P05750 240 aaKnown RBP1.98□□□□□ -2.09
LOC1YFR001W RPC40P07703 335 aaKnown RBP1.98□□□□□ -2.09
LOC1YFR001W SNF6P18888 332 aa1.98□□□□□ -2.09
LOC1YFR001W RRT12P25381 491 aa1.98□□□□□ -2.09
LOC1YFR001W YHI9P38765 294 aa1.98□□□□□ -2.09
LOC1YFR001W PEX31P53203 462 aa1.98□□□□□ -2.09
LOC1YFR001W SSU72P53538 206 aaPredicted RBP1.98□□□□□ -2.09
LOC1YFR001W TRM44Q02648 567 aaKnown RBP1.98□□□□□ -2.09
LOC1YFR001W SDC1Q03323 175 aa1.98□□□□□ -2.09
LOC1YFR001W VBA1Q04301 562 aa1.98□□□□□ -2.09
LOC1YFR001W YLR413WQ06689 675 aa1.98□□□□□ -2.09
LOC1YFR001W AGC1Q12482 902 aa1.98□□□□□ -2.09
LOC1YFR001W MRPL23Q12487 163 aaPredicted RBP1.98□□□□□ -2.09
LOC1YFR001W YIL002W-AQ3E7Z5 69 aa1.98□□□□□ -2.09
LOC1YFR001W ISD11Q6Q560 94 aa1.98□□□□□ -2.09
LOC1YFR001W NUP157P40064 1391 aaKnown RBP1.98□□□□□ -2.09
LOC1YFR001W YSR3P23501 404 aa1.97□□□□□ -2.09
LOC1YFR001W ICL1P28240 557 aaPredicted RBP1.97□□□□□ -2.09
LOC1YFR001W COY1P34237 679 aa1.97□□□□□ -2.09
LOC1YFR001W CSG2P35206 410 aa1.97□□□□□ -2.09
LOC1YFR001W YKL070WP36087 169 aa1.97□□□□□ -2.09
LOC1YFR001W HMT1P38074 348 aa1.97□□□□□ -2.09
LOC1YFR001W ATG12P38316 186 aa1.97□□□□□ -2.09
LOC1YFR001W RRF1P38771 230 aa1.97□□□□□ -2.09
LOC1YFR001W YJR141WP47172 347 aaPredicted RBP1.97□□□□□ -2.09
LOC1YFR001W SFH1Q06168 426 aa1.97□□□□□ -2.09
LOC1YFR001W SEC10Q06245 871 aa1.97□□□□□ -2.09
LOC1YFR001W CTS2Q06350 511 aa1.97□□□□□ -2.09
LOC1YFR001W FMP16Q12497 93 aa1.97□□□□□ -2.09
LOC1YFR001W YEL009C-AA0A023PZF2 135 aa1.96□□□□□ -2.1
LOC1YFR001W YAL064W-BO13512 126 aa1.96□□□□□ -2.1
LOC1YFR001W TOM40P23644 387 aaKnown RBP1.96□□□□□ -2.1
LOC1YFR001W DAL80P26343 269 aa1.96□□□□□ -2.1
LOC1YFR001W CAM1P29547 415 aaKnown RBP1.96□□□□□ -2.1
LOC1YFR001W ARN2P38724 620 aa1.96□□□□□ -2.1
LOC1YFR001W SER33P40510 469 aa1.96□□□□□ -2.1
LOC1YFR001W FMP33P46998 180 aa1.96□□□□□ -2.1
LOC1YFR001W MND1P53102 219 aa1.96□□□□□ -2.1
LOC1YFR001W CDC14Q00684 551 aa1.96□□□□□ -2.1
LOC1YFR001W EGD1Q02642 157 aaKnown RBP1.96□□□□□ -2.1
LOC1YFR001W YOL019WQ08157 551 aa1.96□□□□□ -2.1
LOC1YFR001W COS2P0CX12 379 aa1.95□□□□□ -2.1
LOC1YFR001W COS3P0CX13 379 aa1.95□□□□□ -2.1
LOC1YFR001W DPM1P14020 267 aaKnown RBP1.95□□□□□ -2.1
LOC1YFR001W PEX3P28795 441 aa1.95□□□□□ -2.1
LOC1YFR001W CLB6P32943 380 aa1.95□□□□□ -2.1
LOC1YFR001W LSB1P53281 241 aa1.95□□□□□ -2.1
LOC1YFR001W ERV25P54837 211 aaKnown RBP1.95□□□□□ -2.1
LOC1YFR001W YMR166CQ03829 368 aa1.95□□□□□ -2.1
LOC1YFR001W RDS3Q06835 107 aaPredicted RBP1.95□□□□□ -2.1
LOC1YFR001W NOT5Q12514 560 aaPredicted RBP1.95□□□□□ -2.1
LOC1YFR001W RPP0P05317 312 aaKnown RBP1.94□□□□□ -2.1
LOC1YFR001W RPL26AP05743 127 aaKnown RBP1.94□□□□□ -2.1
LOC1YFR001W POF1P25576 258 aa1.94□□□□□ -2.1
LOC1YFR001W BMH1P29311 267 aaKnown RBP1.94□□□□□ -2.1
LOC1YFR001W MNN5P46982 586 aa1.94□□□□□ -2.1
LOC1YFR001W MRX5P47007 382 aa1.94□□□□□ -2.1
LOC1YFR001W RPL26BP53221 127 aaKnown RBP1.94□□□□□ -2.1
LOC1YFR001W GRH1Q04410 372 aaKnown RBP1.94□□□□□ -2.1
LOC1YFR001W ARV1Q06541 321 aa1.94□□□□□ -2.1
LOC1YFR001W PLB3Q08108 686 aa1.94□□□□□ -2.1
LOC1YFR001W YOR268CQ08734 132 aa1.94□□□□□ -2.1
LOC1YFR001W VPS68Q12016 184 aa1.94□□□□□ -2.1
LOC1YFR001W YOS9Q99220 542 aa1.94□□□□□ -2.1
LOC1YFR001W RPL4AP10664 362 aaKnown RBP1.93□□□□□ -2.1
LOC1YFR001W PEX18P38855 283 aa1.93□□□□□ -2.1
LOC1YFR001W YJR146WP47174 117 aa1.93□□□□□ -2.1
LOC1YFR001W RPL4BP49626 362 aaKnown RBP1.93□□□□□ -2.1
LOC1YFR001W SWS2P53937 143 aa1.93□□□□□ -2.1
LOC1YFR001W SPP2Q02521 185 aa1.93□□□□□ -2.1
LOC1YFR001W PER33Q12144 273 aa1.93□□□□□ -2.1
LOC1YFR001W AI5_BETAQ9ZZX0 354 aa1.93□□□□□ -2.1
LOC1YFR001W RAD10P06838 210 aa1.92□□□□□ -2.1
LOC1YFR001W HSM3P38348 480 aa1.92□□□□□ -2.1
LOC1YFR001W NPT1P39683 429 aaKnown RBP1.92□□□□□ -2.1
LOC1YFR001W DSK2P48510 373 aa1.92□□□□□ -2.1
LOC1YFR001W NBP35P52920 328 aa1.92□□□□□ -2.1
LOC1YFR001W TIM21P53220 239 aa1.92□□□□□ -2.1
LOC1YFR001W MNT4P53745 580 aa1.92□□□□□ -2.1
LOC1YFR001W ATC1Q04005 294 aa1.92□□□□□ -2.1
LOC1YFR001W MYO5Q04439 1219 aaKnown RBP1.92□□□□□ -2.1
LOC1YFR001W SPO77Q06134 477 aa1.92□□□□□ -2.1
LOC1YFR001W SMT3Q12306 101 aaKnown RBP1.92□□□□□ -2.1
LOC1YFR001W SSA3P09435 649 aaKnown RBP1.91□□□□□ -2.1
LOC1YFR001W SFC1P33303 322 aa1.91□□□□□ -2.1
LOC1YFR001W AGX1P43567 385 aa1.91□□□□□ -2.1
LOC1YFR001W NIF3P53081 288 aa1.91□□□□□ -2.1
LOC1YFR001W SUE1Q06524 206 aa1.91□□□□□ -2.1
LOC1YFR001W YPL247CQ12523 523 aa1.91□□□□□ -2.1
LOC1YFR001W DPB2P24482 689 aaPredicted RBP1.9□□□□□ -2.11
LOC1YFR001W GDH2P33327 1092 aaKnown RBP1.9□□□□□ -2.11
LOC1YFR001W YHL049CP38722 271 aa1.9□□□□□ -2.11
LOC1YFR001W YHR045WP38775 560 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms