RNA–Protein interactions for RNA: YDR322C-A

TIM11, Transcript of Subunit e of mitochondrial F1F0-ATPase, yeastyeast

Gene TIM11, Length 291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM11YDR322C-A TPN1P53099 579 aa2.28□□□□□ -2.04
TIM11YDR322C-A NSA1P53136 463 aaPredicted RBP2.28□□□□□ -2.04
TIM11YDR322C-A YGL039WP53183 348 aaKnown RBP2.28□□□□□ -2.04
TIM11YDR322C-A NOP19P53317 196 aaPredicted RBP2.28□□□□□ -2.04
TIM11YDR322C-A VAC7P53950 1165 aa2.28□□□□□ -2.04
TIM11YDR322C-A CDC14Q00684 551 aa2.28□□□□□ -2.04
TIM11YDR322C-A PRM15Q03262 622 aa2.28□□□□□ -2.04
TIM11YDR322C-A VPS60Q03390 229 aa2.28□□□□□ -2.04
TIM11YDR322C-A PEX10Q05568 337 aa2.28□□□□□ -2.04
TIM11YDR322C-A YET3Q07451 203 aa2.28□□□□□ -2.04
TIM11YDR322C-A HNT3Q08702 217 aa2.28□□□□□ -2.04
TIM11YDR322C-A PPT2Q12036 173 aa2.28□□□□□ -2.04
TIM11YDR322C-A ATP16Q12165 160 aa2.28□□□□□ -2.04
TIM11YDR322C-A TIP41Q12199 356 aa2.28□□□□□ -2.04
TIM11YDR322C-A YOR114WQ12219 294 aa2.28□□□□□ -2.04
TIM11YDR322C-A ICT1Q12385 394 aa2.28□□□□□ -2.04
TIM11YDR322C-A FOL3Q12676 427 aaPredicted RBP2.28□□□□□ -2.04
TIM11YDR322C-A YDR157WA0A023PZE8 133 aa2.27□□□□□ -2.05
TIM11YDR322C-A YMR316C-AI2HB70 103 aa2.27□□□□□ -2.05
TIM11YDR322C-A QCR7P00128 127 aa2.27□□□□□ -2.05
TIM11YDR322C-A RPS14AP06367 137 aaKnown RBP2.27□□□□□ -2.05
TIM11YDR322C-A STE7P06784 515 aa2.27□□□□□ -2.05
TIM11YDR322C-A YAK1P14680 807 aa2.27□□□□□ -2.05
TIM11YDR322C-A GIT1P25346 518 aa2.27□□□□□ -2.05
TIM11YDR322C-A RFA3P26755 122 aaKnown RBP2.27□□□□□ -2.05
TIM11YDR322C-A CAM1P29547 415 aaKnown RBP2.27□□□□□ -2.05
TIM11YDR322C-A CDC13P32797 924 aaKnown RBP2.27□□□□□ -2.05
TIM11YDR322C-A MED8P38304 223 aa2.27□□□□□ -2.05
TIM11YDR322C-A ATG12P38316 186 aa2.27□□□□□ -2.05
TIM11YDR322C-A RCK1P38622 512 aa2.27□□□□□ -2.05
TIM11YDR322C-A PTH1P38876 190 aaKnown RBP2.27□□□□□ -2.05
TIM11YDR322C-A PET8P38921 284 aa2.27□□□□□ -2.05
TIM11YDR322C-A RPS14BP39516 138 aaKnown RBP2.27□□□□□ -2.05
TIM11YDR322C-A VAB2P40003 282 aa2.27□□□□□ -2.05
TIM11YDR322C-A PAN6P40459 309 aa2.27□□□□□ -2.05
TIM11YDR322C-A YJR085CP47131 105 aaKnown RBP2.27□□□□□ -2.05
TIM11YDR322C-A BIR1P47134 954 aa2.27□□□□□ -2.05
TIM11YDR322C-A MGA1P53050 456 aa2.27□□□□□ -2.05
TIM11YDR322C-A SSU72P53538 206 aaPredicted RBP2.27□□□□□ -2.05
TIM11YDR322C-A YNL247WP53852 767 aaKnown RBP2.27□□□□□ -2.05
TIM11YDR322C-A CTF19Q02732 369 aa2.27□□□□□ -2.05
TIM11YDR322C-A YMR114CQ04471 368 aaKnown RBP2.27□□□□□ -2.05
TIM11YDR322C-A YHC1Q05900 231 aaKnown RBP2.27□□□□□ -2.05
TIM11YDR322C-A TPI1P00942 248 aaKnown RBP2.26□□□□□ -2.05
TIM11YDR322C-A BCY1P07278 416 aaKnown RBP2.26□□□□□ -2.05
TIM11YDR322C-A RPL35AP0CX84 120 aaKnown RBP2.26□□□□□ -2.05
TIM11YDR322C-A RPL35BP0CX85 120 aaKnown RBP2.26□□□□□ -2.05
TIM11YDR322C-A RPL4AP10664 362 aaKnown RBP2.26□□□□□ -2.05
TIM11YDR322C-A PRX1P34227 261 aaKnown RBP2.26□□□□□ -2.05
TIM11YDR322C-A CAF4P36130 643 aa2.26□□□□□ -2.05
TIM11YDR322C-A DRE2P36152 348 aa2.26□□□□□ -2.05
TIM11YDR322C-A HEK2P38199 381 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
TIM11YDR322C-A EFM1P38732 585 aa2.26□□□□□ -2.05
TIM11YDR322C-A YHR127WP38833 243 aaKnown RBP2.26□□□□□ -2.05
TIM11YDR322C-A CHL4P38907 458 aa2.26□□□□□ -2.05
TIM11YDR322C-A KRE29P40026 464 aa2.26□□□□□ -2.05
TIM11YDR322C-A YIL067CP40514 678 aa2.26□□□□□ -2.05
TIM11YDR322C-A EGT2P42835 1041 aa2.26□□□□□ -2.05
TIM11YDR322C-A IRC18P47056 224 aa2.26□□□□□ -2.05
TIM11YDR322C-A NUP57P48837 541 aa2.26□□□□□ -2.05
TIM11YDR322C-A RPL4BP49626 362 aaKnown RBP2.26□□□□□ -2.05
TIM11YDR322C-A NIF3P53081 288 aa2.26□□□□□ -2.05
TIM11YDR322C-A YGL159WP53110 370 aa2.26□□□□□ -2.05
TIM11YDR322C-A YNR066CP53752 436 aa2.26□□□□□ -2.05
TIM11YDR322C-A FYV6P53913 173 aa2.26□□□□□ -2.05
TIM11YDR322C-A SWS2P53937 143 aa2.26□□□□□ -2.05
TIM11YDR322C-A TPS1Q00764 495 aaKnown RBP2.26□□□□□ -2.05
TIM11YDR322C-A SKI8Q02793 397 aaPredicted RBP2.26□□□□□ -2.05
TIM11YDR322C-A IRC25Q07951 179 aa2.26□□□□□ -2.05
TIM11YDR322C-A MCT1Q12283 360 aa2.26□□□□□ -2.05
TIM11YDR322C-A NAG1Q8TGN9 163 aa2.26□□□□□ -2.05
TIM11YDR322C-A SIR4P11978 1358 aa2.25□□□□□ -2.05
TIM11YDR322C-A SPT3P06844 337 aa2.25□□□□□ -2.05
TIM11YDR322C-A YKR104WP0CE69 306 aa2.25□□□□□ -2.05
TIM11YDR322C-A ARO2P28777 376 aaKnown RBP2.25□□□□□ -2.05
TIM11YDR322C-A NTF2P33331 125 aaKnown RBP2.25□□□□□ -2.05
TIM11YDR322C-A YKL075CP36083 450 aa2.25□□□□□ -2.05
TIM11YDR322C-A MRPL39P36533 70 aa2.25□□□□□ -2.05
TIM11YDR322C-A SOL2P37262 315 aa2.25□□□□□ -2.05
TIM11YDR322C-A RFT1P38206 574 aaPredicted RBP2.25□□□□□ -2.05
TIM11YDR322C-A SHG1P38337 142 aa2.25□□□□□ -2.05
TIM11YDR322C-A SEN34P39707 275 aa2.25□□□□□ -2.05
TIM11YDR322C-A PTI1P39927 425 aaPredicted RBP2.25□□□□□ -2.05
TIM11YDR322C-A YER186CP40101 306 aa2.25□□□□□ -2.05
TIM11YDR322C-A YMR144WP40214 342 aaKnown RBP2.25□□□□□ -2.05
TIM11YDR322C-A BMT5P40493 336 aa2.25□□□□□ -2.05
TIM11YDR322C-A SER33P40510 469 aa2.25□□□□□ -2.05
TIM11YDR322C-A SNM1P40993 198 aa2.25□□□□□ -2.05
TIM11YDR322C-A ERG10P41338 398 aaKnown RBP2.25□□□□□ -2.05
TIM11YDR322C-A YJL016WP47072 561 aa2.25□□□□□ -2.05
TIM11YDR322C-A MCM22P47167 239 aa2.25□□□□□ -2.05
TIM11YDR322C-A YJR141WP47172 347 aaPredicted RBP2.25□□□□□ -2.05
TIM11YDR322C-A TRM9P49957 279 aa2.25□□□□□ -2.05
TIM11YDR322C-A PRP24P49960 444 aaKnown RBP2.25□□□□□ -2.05
TIM11YDR322C-A NBP35P52920 328 aa2.25□□□□□ -2.05
TIM11YDR322C-A SDS23P53172 527 aa2.25□□□□□ -2.05
TIM11YDR322C-A SLX9P53251 210 aaPredicted RBP2.25□□□□□ -2.05
TIM11YDR322C-A TPC1P53257 314 aa2.25□□□□□ -2.05
TIM11YDR322C-A CRH1P53301 507 aa2.25□□□□□ -2.05
TIM11YDR322C-A RNH201P53942 307 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms