RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W SPT4P32914 102 aaPredicted RBP0.65□□□□□ -2.31
BFR2YDR299W SFC1P33303 322 aa0.65□□□□□ -2.31
BFR2YDR299W MRPL40P36534 297 aa0.65□□□□□ -2.31
BFR2YDR299W NPT1P39683 429 aaKnown RBP0.65□□□□□ -2.31
BFR2YDR299W SEN34P39707 275 aa0.65□□□□□ -2.31
BFR2YDR299W COG3P40094 801 aa0.65□□□□□ -2.31
BFR2YDR299W TIF34P40217 347 aaKnown RBP0.65□□□□□ -2.31
BFR2YDR299W SHQ1P40486 507 aaPredicted RBP0.65□□□□□ -2.31
BFR2YDR299W YIL012WP40551 113 aa0.65□□□□□ -2.31
BFR2YDR299W MRPL49P40858 161 aaPredicted RBP0.65□□□□□ -2.31
BFR2YDR299W YJL016WP47072 561 aa0.65□□□□□ -2.31
BFR2YDR299W IBA57P47158 497 aa0.65□□□□□ -2.31
BFR2YDR299W MND1P53102 219 aa0.65□□□□□ -2.31
BFR2YDR299W CPD1P53314 239 aa0.65□□□□□ -2.31
BFR2YDR299W SWT21P53873 357 aaPredicted RBP0.65□□□□□ -2.31
BFR2YDR299W GMC2Q06201 188 aa0.65□□□□□ -2.31
BFR2YDR299W CLP1Q08685 445 aaPredicted RBP0.65□□□□□ -2.31
BFR2YDR299W REX3Q12090 404 aa0.65□□□□□ -2.31
BFR2YDR299W GPI12P23797 304 aa0.64□□□□□ -2.31
BFR2YDR299W CSM1P25651 190 aa0.64□□□□□ -2.31
BFR2YDR299W CWP1P28319 239 aa0.64□□□□□ -2.31
BFR2YDR299W POP8P38208 133 aa0.64□□□□□ -2.31
BFR2YDR299W YPC1P38298 316 aa0.64□□□□□ -2.31
BFR2YDR299W DDI1P40087 428 aa0.64□□□□□ -2.31
BFR2YDR299W AGX1P43567 385 aa0.64□□□□□ -2.31
BFR2YDR299W TAD2P47058 250 aa0.64□□□□□ -2.31
BFR2YDR299W EMC2P47133 292 aaKnown RBP0.64□□□□□ -2.31
BFR2YDR299W OST3P48439 350 aa0.64□□□□□ -2.31
BFR2YDR299W KAP114P53067 1004 aa0.64□□□□□ -2.31
BFR2YDR299W TPN1P53099 579 aa0.64□□□□□ -2.31
BFR2YDR299W DAD3P69850 94 aa0.64□□□□□ -2.31
BFR2YDR299W RGM1Q00453 211 aa0.64□□□□□ -2.31
BFR2YDR299W MRS2Q01926 470 aa0.64□□□□□ -2.31
BFR2YDR299W POM33Q12164 279 aa0.64□□□□□ -2.31
BFR2YDR299W YOR114WQ12219 294 aa0.64□□□□□ -2.31
BFR2YDR299W SME1Q12330 94 aaPredicted RBP0.64□□□□□ -2.31
BFR2YDR299W EMC6Q12431 108 aa0.64□□□□□ -2.31
BFR2YDR299W SNF8Q12483 233 aa0.64□□□□□ -2.31
BFR2YDR299W YAL063C-AQ3E791 96 aa0.64□□□□□ -2.31
BFR2YDR299W RPS3P05750 240 aaKnown RBP0.64□□□□□ -2.31
BFR2YDR299W PET494P07390 489 aaPredicted RBP0.64□□□□□ -2.31
BFR2YDR299W RPC40P07703 335 aaKnown RBP0.64□□□□□ -2.31
BFR2YDR299W PUT1P09368 476 aa0.64□□□□□ -2.31
BFR2YDR299W SSA3P09435 649 aaKnown RBP0.64□□□□□ -2.31
BFR2YDR299W RPL4AP10664 362 aaKnown RBP0.64□□□□□ -2.31
BFR2YDR299W FRS2P15625 503 aaKnown RBP0.64□□□□□ -2.31
BFR2YDR299W SNF6P18888 332 aa0.64□□□□□ -2.31
BFR2YDR299W CDC42P19073 191 aa0.64□□□□□ -2.31
BFR2YDR299W CCA1P21269 546 aa0.64□□□□□ -2.31
BFR2YDR299W PPH21P23594 369 aa0.64□□□□□ -2.31
BFR2YDR299W DPB2P24482 689 aaPredicted RBP0.64□□□□□ -2.31
BFR2YDR299W RNP1P32385 249 aa0.64□□□□□ -2.31
BFR2YDR299W COT1P32798 439 aa0.64□□□□□ -2.31
BFR2YDR299W CSG2P35206 410 aa0.64□□□□□ -2.31
BFR2YDR299W PRM9P39551 298 aa0.64□□□□□ -2.31
BFR2YDR299W OSW5P40219 148 aa0.64□□□□□ -2.31
BFR2YDR299W RSM25P40496 264 aa0.64□□□□□ -2.31
BFR2YDR299W RPL4BP49626 362 aaKnown RBP0.64□□□□□ -2.31
BFR2YDR299W AAH1P53909 347 aa0.64□□□□□ -2.31
BFR2YDR299W CTF19Q02732 369 aa0.64□□□□□ -2.31
BFR2YDR299W PRM15Q03262 622 aa0.64□□□□□ -2.31
BFR2YDR299W YMR279CQ03263 540 aa0.64□□□□□ -2.31
BFR2YDR299W SDC1Q03323 175 aa0.64□□□□□ -2.31
BFR2YDR299W CGI121Q03705 181 aaKnown RBP0.64□□□□□ -2.31
BFR2YDR299W YML108WQ03759 105 aa0.64□□□□□ -2.31
BFR2YDR299W SFH1Q06168 426 aa0.64□□□□□ -2.31
BFR2YDR299W ATG17Q06410 417 aa0.64□□□□□ -2.31
BFR2YDR299W YLR413WQ06689 675 aa0.64□□□□□ -2.31
BFR2YDR299W SLD7Q08457 257 aa0.64□□□□□ -2.31
BFR2YDR299W ATG5Q12380 294 aa0.64□□□□□ -2.31
BFR2YDR299W SSK22P25390 1331 aaPredicted RBP0.63□□□□□ -2.31
BFR2YDR299W STH1P32597 1359 aa0.63□□□□□ -2.31
BFR2YDR299W HIS1P00498 297 aaKnown RBP0.63□□□□□ -2.31
BFR2YDR299W ADH3P07246 375 aaKnown RBP0.63□□□□□ -2.31
BFR2YDR299W DPM1P14020 267 aaKnown RBP0.63□□□□□ -2.31
BFR2YDR299W MET16P18408 261 aaPredicted RBP0.63□□□□□ -2.31
BFR2YDR299W YSR3P23501 404 aa0.63□□□□□ -2.31
BFR2YDR299W VPS3P23643 1011 aa0.63□□□□□ -2.31
BFR2YDR299W SCM4P32564 187 aa0.63□□□□□ -2.31
BFR2YDR299W SKI2P35207 1287 aaKnown RBP RIP-Chip data0.63□□□□□ -2.31not detected
BFR2YDR299W HMT1P38074 348 aa0.63□□□□□ -2.31
BFR2YDR299W FZO1P38297 855 aa0.63□□□□□ -2.31
BFR2YDR299W HSM3P38348 480 aa0.63□□□□□ -2.31
BFR2YDR299W SSH1P38353 490 aaKnown RBP0.63□□□□□ -2.31
BFR2YDR299W COS8P38723 381 aa0.63□□□□□ -2.31
BFR2YDR299W RRF1P38771 230 aa0.63□□□□□ -2.31
BFR2YDR299W PCL7P40186 285 aa0.63□□□□□ -2.31
BFR2YDR299W DSN1P40568 576 aa0.63□□□□□ -2.31
BFR2YDR299W NIF3P53081 288 aa0.63□□□□□ -2.31
BFR2YDR299W YGR026WP53217 278 aa0.63□□□□□ -2.31
BFR2YDR299W COS6P53344 381 aa0.63□□□□□ -2.31
BFR2YDR299W MNT4P53745 580 aa0.63□□□□□ -2.31
BFR2YDR299W SPP2Q02521 185 aa0.63□□□□□ -2.31
BFR2YDR299W MIX17Q03667 156 aa0.63□□□□□ -2.31
BFR2YDR299W VBA1Q04301 562 aa0.63□□□□□ -2.31
BFR2YDR299W PEX12Q04370 399 aa0.63□□□□□ -2.31
BFR2YDR299W YDR124WQ04608 324 aa0.63□□□□□ -2.31
BFR2YDR299W ECM18Q04623 453 aa0.63□□□□□ -2.31
BFR2YDR299W ADH6Q04894 360 aaKnown RBP0.63□□□□□ -2.31
BFR2YDR299W FCF1Q05498 189 aaPredicted RBP0.63□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 81.6 ms