RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP42	YDR192C	SRX1	P36077	127 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	FMP23	P38231	175 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	GOS1	P38736	223 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	BIG1	P38813	335 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	APE4	P38821	490 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	PRP39	P39682	629 aa	Known RBP	4.1	□□□□□ -1.75
NUP42	YDR192C	IDP2	P41939	412 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	PRM10	P42946	383 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	YGL260W	P53056	76 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	NQM1	P53228	333 aa	Predicted RBP	4.1	□□□□□ -1.75
NUP42	YDR192C	YMR181C	Q03231	154 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	YLR456W	Q06199	204 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	YPR172W	Q06608	200 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	YLR036C	Q07986	203 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	YOL107W	Q12239	342 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	YOR214C	Q12282	236 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	WTM1	Q12363	437 aa	Known RBP	4.1	□□□□□ -1.75
NUP42	YDR192C	APC2	Q12440	853 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	YBR298C-A	Q8TGK4	73 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	MSB2	P32334	1306 aa		4.1	□□□□□ -1.75
NUP42	YDR192C	TPK3	P05986	398 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	GDH1	P07262	454 aa	Known RBP	4.09	□□□□□ -1.75
NUP42	YDR192C	GAL7	P08431	366 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	TFS1	P14306	219 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	UBC8	P28263	218 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	CDC13	P32797	924 aa	Known RBP	4.09	□□□□□ -1.75
NUP42	YDR192C	RCY1	P39531	840 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	RTT105	P40063	208 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	GAT2	P40209	560 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	TIF34	P40217	347 aa	Known RBP	4.09	□□□□□ -1.75
NUP42	YDR192C	LYS12	P40495	371 aa	Known RBP	4.09	□□□□□ -1.75
NUP42	YDR192C	GCN20	P43535	752 aa	Known RBP	4.09	□□□□□ -1.75
NUP42	YDR192C	APS3	P47064	194 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	MDE1	P47095	244 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	RAD17	P48581	401 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	MSO1	P53604	210 aa	Known RBP	4.09	□□□□□ -1.75
NUP42	YDR192C	SPR6	Q01684	191 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	BET5	Q03630	159 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	URC2	Q04411	772 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	YPR022C	Q12139	1133 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	MSH5	Q12175	901 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	YDR262W	Q12331	272 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	ORT1	Q12375	292 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	MRX4	Q12467	430 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	RRP12	Q12754	1228 aa	Known RBP	4.09	□□□□□ -1.75
NUP42	YDR192C	YKL018C-A	Q3E7A7	99 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	NAG1	Q8TGN9	163 aa		4.09	□□□□□ -1.75
NUP42	YDR192C	RPL6B	P05739	176 aa	Known RBP	4.08	□□□□□ -1.76
NUP42	YDR192C	RPL1A	P0CX43	217 aa	Known RBP	4.08	□□□□□ -1.76
NUP42	YDR192C	RPL1B	P0CX44	217 aa	Known RBP	4.08	□□□□□ -1.76
NUP42	YDR192C	CPR1	P14832	162 aa	Known RBP	4.08	□□□□□ -1.76
NUP42	YDR192C	RPB5	P20434	215 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	CYS4	P32582	507 aa	Known RBP	4.08	□□□□□ -1.76
NUP42	YDR192C	VPS51	P36116	164 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	FMP46	P36141	133 aa	Known RBP	4.08	□□□□□ -1.76
NUP42	YDR192C	ECM4	P36156	370 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	YBR285W	P38354	144 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	RRP4	P38792	359 aa	Known RBP	4.08	□□□□□ -1.76
NUP42	YDR192C	YHR177W	P38867	453 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	SPO73	P40031	143 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	YRB2	P40517	327 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	YPS6	P40583	537 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	STE24	P47154	453 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	SWS2	P53937	143 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	EOS1	P53938	366 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	RPL6A	Q02326	176 aa	Known RBP	4.08	□□□□□ -1.76
NUP42	YDR192C	YDR541C	Q03049	344 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	GRX3	Q03835	250 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	APC4	Q04601	652 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	NEJ1	Q06148	342 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	ARR1	Q06596	294 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	DTD1	Q07648	150 aa	Known RBP	4.08	□□□□□ -1.76
NUP42	YDR192C	REX3	Q12090	404 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	TRM10	Q12400	293 aa		4.08	□□□□□ -1.76
NUP42	YDR192C	PET9	P18239	318 aa	Known RBP	4.07	□□□□□ -1.76
NUP42	YDR192C	DPB2	P24482	689 aa	Predicted RBP	4.07	□□□□□ -1.76
NUP42	YDR192C	RNA14	P25298	677 aa	Known RBP	4.07	□□□□□ -1.76
NUP42	YDR192C	RPT5	P33297	434 aa	Known RBP	4.07	□□□□□ -1.76
NUP42	YDR192C	GDH2	P33327	1092 aa	Known RBP	4.07	□□□□□ -1.76
NUP42	YDR192C	YOR062C	P36025	268 aa		4.07	□□□□□ -1.76
NUP42	YDR192C	NAT2	P37293	288 aa		4.07	□□□□□ -1.76
NUP42	YDR192C	FES1	P38260	290 aa		4.07	□□□□□ -1.76
NUP42	YDR192C	EGD2	P38879	174 aa	Known RBP	4.07	□□□□□ -1.76
NUP42	YDR192C	IPT1	P38954	527 aa		4.07	□□□□□ -1.76
NUP42	YDR192C	YFL067W	P43537	175 aa		4.07	□□□□□ -1.76
NUP42	YDR192C	NUP57	P48837	541 aa		4.07	□□□□□ -1.76
NUP42	YDR192C	PRM8	P53174	237 aa		4.07	□□□□□ -1.76
NUP42	YDR192C	MNT4	P53745	580 aa		4.07	□□□□□ -1.76
NUP42	YDR192C	IGO1	P53897	168 aa		4.07	□□□□□ -1.76
NUP42	YDR192C	GAL83	Q04739	417 aa		4.07	□□□□□ -1.76
NUP42	YDR192C	YPR091C	Q06833	770 aa		4.07	□□□□□ -1.76
NUP42	YDR192C	RRP40	Q08285	240 aa	Known RBP	4.07	□□□□□ -1.76
NUP42	YDR192C	YPR064W	Q12492	139 aa		4.07	□□□□□ -1.76
NUP42	YDR192C	SKS1	Q12505	502 aa		4.07	□□□□□ -1.76
NUP42	YDR192C	YGL041W-A	P0C5N3	154 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	YOL163W	P0CF20	169 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	ARO3	P14843	370 aa	Known RBP	4.06	□□□□□ -1.76
NUP42	YDR192C	IDP1	P21954	428 aa	Known RBP	4.06	□□□□□ -1.76
NUP42	YDR192C	ATS1	P31386	333 aa		4.06	□□□□□ -1.76
NUP42	YDR192C	SUI1	P32911	108 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 414.4 ms