RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.78	□□□□□ -2.28	not detected
SWF1	YDR126W	KRE6	P32486	720 aa		0.78	□□□□□ -2.28
SWF1	YDR126W	SCM4	P32564	187 aa		0.78	□□□□□ -2.28
SWF1	YDR126W	CAT2	P32796	670 aa	Known RBP	0.78	□□□□□ -2.28
SWF1	YDR126W	YHI9	P38765	294 aa		0.78	□□□□□ -2.28
SWF1	YDR126W	LIN1	P38852	340 aa	Predicted RBP	0.78	□□□□□ -2.28
SWF1	YDR126W	PEX18	P38855	283 aa		0.78	□□□□□ -2.28
SWF1	YDR126W	END3	P39013	349 aa		0.78	□□□□□ -2.28
SWF1	YDR126W	PEP8	P40335	379 aa		0.78	□□□□□ -2.28
SWF1	YDR126W	MRX5	P47007	382 aa		0.78	□□□□□ -2.28
SWF1	YDR126W	MPP10	P47083	593 aa	Known RBP	0.78	□□□□□ -2.28
SWF1	YDR126W	BCP1	Q06338	283 aa		0.78	□□□□□ -2.28
SWF1	YDR126W	YOL019W	Q08157	551 aa		0.78	□□□□□ -2.28
SWF1	YDR126W	RRP42	Q12277	265 aa	Predicted RBP	0.78	□□□□□ -2.28
SWF1	YDR126W	RPL24A	P04449	155 aa	Known RBP	0.77	□□□□□ -2.29
SWF1	YDR126W	RPC40	P07703	335 aa	Known RBP	0.77	□□□□□ -2.29
SWF1	YDR126W	YOL162W	P0CF19	215 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	GAL3	P13045	520 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	ICL1	P28240	557 aa	Predicted RBP	0.77	□□□□□ -2.29
SWF1	YDR126W	COT1	P32798	439 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	SFC1	P33303	322 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	RPC25	P35718	212 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	POP8	P38208	133 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	VPS45	P38932	577 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	MNN9	P39107	395 aa	Known RBP	0.77	□□□□□ -2.29
SWF1	YDR126W	SEN34	P39707	275 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	LOC1	P43586	204 aa	Predicted RBP	0.77	□□□□□ -2.29
SWF1	YDR126W	EMC2	P47133	292 aa	Known RBP	0.77	□□□□□ -2.29
SWF1	YDR126W	CAB5	Q03941	241 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	VPS20	Q04272	221 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	YMR111C	Q04461	462 aa	Predicted RBP	0.77	□□□□□ -2.29
SWF1	YDR126W	YDR286C	Q05530	114 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	GPN3	Q06543	272 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	SAM4	Q08985	325 aa	Known RBP	0.77	□□□□□ -2.29
SWF1	YDR126W	REX3	Q12090	404 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	SIA1	Q12212	622 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	MDY2	Q12285	212 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	PSY3	Q12318	242 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	YPR1	Q12458	312 aa		0.77	□□□□□ -2.29
SWF1	YDR126W	ILV1	P00927	576 aa	Known RBP	0.76	□□□□□ -2.29
SWF1	YDR126W	SGA1	P08019	549 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	YKL162C	P36052	402 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	DRE2	P36152	348 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	MRPL40	P36534	297 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	SWC5	P38326	303 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	RRF1	P38771	230 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	SHC1	P39000	512 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	YIA6	P40556	373 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	CDC40	P40968	455 aa	Predicted RBP	0.76	□□□□□ -2.29
SWF1	YDR126W	GDS1	P41913	522 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	GTO1	P48239	356 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	YNL260C	P53846	198 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	YPL077C	Q02831	240 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	SPO19	Q03029	223 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	YML018C	Q03730	393 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	PEX12	Q04370	399 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	RRG8	Q06109	277 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	BER1	Q06688	274 aa	Known RBP	0.76	□□□□□ -2.29
SWF1	YDR126W	YLR413W	Q06689	675 aa		0.76	□□□□□ -2.29
SWF1	YDR126W	CAR2	P07991	424 aa	Known RBP	0.75	□□□□□ -2.29
SWF1	YDR126W	SSA3	P09435	649 aa	Known RBP	0.75	□□□□□ -2.29
SWF1	YDR126W	RPL31A	P0C2H8	113 aa	Known RBP	0.75	□□□□□ -2.29
SWF1	YDR126W	UGA1	P17649	471 aa		0.75	□□□□□ -2.29
SWF1	YDR126W	YKL063C	P35725	167 aa		0.75	□□□□□ -2.29
SWF1	YDR126W	SWD2	P36104	329 aa	Predicted RBP	0.75	□□□□□ -2.29
SWF1	YDR126W	HIS2	P38635	335 aa		0.75	□□□□□ -2.29
SWF1	YDR126W	OSW5	P40219	148 aa		0.75	□□□□□ -2.29
SWF1	YDR126W	NAS2	P40555	220 aa		0.75	□□□□□ -2.29
SWF1	YDR126W	ERV25	P54837	211 aa	Known RBP	0.75	□□□□□ -2.29
SWF1	YDR126W	ERV41	Q04651	352 aa		0.75	□□□□□ -2.29
SWF1	YDR126W	VAC14	Q06708	880 aa		0.75	□□□□□ -2.29
SWF1	YDR126W	PML1	Q07930	204 aa	Predicted RBP	0.75	□□□□□ -2.29
SWF1	YDR126W	MED4	Q12343	284 aa		0.75	□□□□□ -2.29
SWF1	YDR126W	YPR064W	Q12492	139 aa		0.75	□□□□□ -2.29
SWF1	YDR126W	MRP1	P10662	321 aa	Known RBP	0.74	□□□□□ -2.29
SWF1	YDR126W	OM45	P16547	393 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	RPC37	P36121	282 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	DSE2	P38844	325 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	RTT105	P40063	208 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	AIM20	P40451	204 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	TAD2	P47058	250 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	GPI8	P49018	411 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	RIB4	P50861	169 aa	Predicted RBP	0.74	□□□□□ -2.29
SWF1	YDR126W	KAP114	P53067	1004 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	MRPL50	P53724	139 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	MPP6	P53725	186 aa	Predicted RBP	0.74	□□□□□ -2.29
SWF1	YDR126W	YNL050C	P53952	270 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	ASI3	P53983	676 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	PRO2	P54885	456 aa	Known RBP	0.74	□□□□□ -2.29
SWF1	YDR126W	MZM1	Q03429	123 aa	Predicted RBP	0.74	□□□□□ -2.29
SWF1	YDR126W	YMR209C	Q03648	457 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	ATC1	Q04005	294 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	TAF9	Q05027	157 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	GMC2	Q06201	188 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	TAZ1	Q06510	381 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	ASR1	Q06834	288 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	PBP4	Q07362	185 aa	Known RBP	0.74	□□□□□ -2.29
SWF1	YDR126W	PER33	Q12144	273 aa		0.74	□□□□□ -2.29
SWF1	YDR126W	SMT3	Q12306	101 aa	Known RBP	0.74	□□□□□ -2.29
SWF1	YDR126W	PAA1	Q12447	191 aa	Known RBP	0.74	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms