RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C CDC42P19073 191 aa3.28□□□□□ -1.88
TRM1YDR120C KTI12P34253 313 aaKnown RBP3.28□□□□□ -1.88
TRM1YDR120C MRP21P38175 177 aa3.28□□□□□ -1.88
TRM1YDR120C GCD14P46959 383 aaPredicted RBP3.28□□□□□ -1.88
TRM1YDR120C YJR079WP47126 109 aa3.28□□□□□ -1.88
TRM1YDR120C MRX9Q07349 420 aaKnown RBP3.28□□□□□ -1.88
TRM1YDR120C PRM4Q12498 284 aa3.28□□□□□ -1.88
TRM1YDR120C YIL002W-AQ3E7Z5 69 aa3.28□□□□□ -1.88
TRM1YDR120C JIP3O13555 125 aa3.27□□□□□ -1.89
TRM1YDR120C SPS100P13130 326 aa3.27□□□□□ -1.89
TRM1YDR120C BGL2P15703 313 aaKnown RBP3.27□□□□□ -1.89
TRM1YDR120C UGA1P17649 471 aa3.27□□□□□ -1.89
TRM1YDR120C RPL5P26321 297 aaKnown RBP3.27□□□□□ -1.89
TRM1YDR120C EBP2P36049 427 aaKnown RBP3.27□□□□□ -1.89
TRM1YDR120C SMP1P38128 452 aa3.27□□□□□ -1.89
TRM1YDR120C RFT1P38206 574 aaPredicted RBP3.27□□□□□ -1.89
TRM1YDR120C YHR035WP38769 630 aa3.27□□□□□ -1.89
TRM1YDR120C CTM1P38818 585 aa3.27□□□□□ -1.89
TRM1YDR120C VEL1P53058 206 aa3.27□□□□□ -1.89
TRM1YDR120C MND1P53102 219 aa3.27□□□□□ -1.89
TRM1YDR120C TPC1P53257 314 aa3.27□□□□□ -1.89
TRM1YDR120C SPG3Q04398 127 aaPredicted RBP3.27□□□□□ -1.89
TRM1YDR120C RPL22AP05749 121 aaKnown RBP3.27□□□□□ -1.89
TRM1YDR120C RPC40P07703 335 aaKnown RBP3.27□□□□□ -1.89
TRM1YDR120C ZRT1P32804 376 aa3.27□□□□□ -1.89
TRM1YDR120C CBF5P33322 483 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
TRM1YDR120C RPC25P35718 212 aa3.27□□□□□ -1.89
TRM1YDR120C TIF34P40217 347 aaKnown RBP3.27□□□□□ -1.89
TRM1YDR120C COQ5P49017 307 aa3.27□□□□□ -1.89
TRM1YDR120C PRP24P49960 444 aaKnown RBP3.27□□□□□ -1.89
TRM1YDR120C BIO4P53630 237 aa3.27□□□□□ -1.89
TRM1YDR120C EGD1Q02642 157 aaKnown RBP3.27□□□□□ -1.89
TRM1YDR120C ARO80Q04052 950 aa3.27□□□□□ -1.89
TRM1YDR120C APC4Q04601 652 aa3.27□□□□□ -1.89
TRM1YDR120C TAF9Q05027 157 aa3.27□□□□□ -1.89
TRM1YDR120C YLR413WQ06689 675 aa3.27□□□□□ -1.89
TRM1YDR120C PBP4Q07362 185 aaKnown RBP3.27□□□□□ -1.89
TRM1YDR120C CLP1Q08685 445 aaPredicted RBP3.27□□□□□ -1.89
TRM1YDR120C MMT2Q08970 484 aa3.27□□□□□ -1.89
TRM1YDR120C AI5_BETAQ9ZZX0 354 aa3.27□□□□□ -1.89
TRM1YDR120C BRR2P32639 2163 aaKnown RBP3.26□□□□□ -1.89
TRM1YDR120C POL2P21951 2222 aaKnown RBP3.26□□□□□ -1.89
TRM1YDR120C PUT4P15380 627 aa3.26□□□□□ -1.89
TRM1YDR120C YKT6P36015 200 aaKnown RBP3.26□□□□□ -1.89
TRM1YDR120C RCK1P38622 512 aa3.26□□□□□ -1.89
TRM1YDR120C MEP1P40260 492 aa3.26□□□□□ -1.89
TRM1YDR120C DSN1P40568 576 aa3.26□□□□□ -1.89
TRM1YDR120C NRM1P53718 249 aa3.26□□□□□ -1.89
TRM1YDR120C ERV41Q04651 352 aa3.26□□□□□ -1.89
TRM1YDR120C MRPL23Q12487 163 aaPredicted RBP3.26□□□□□ -1.89
TRM1YDR120C GAL7P08431 366 aa3.25□□□□□ -1.89
TRM1YDR120C CSG2P35206 410 aa3.25□□□□□ -1.89
TRM1YDR120C URA8P38627 578 aaPredicted RBP3.25□□□□□ -1.89
TRM1YDR120C EFM1P38732 585 aa3.25□□□□□ -1.89
TRM1YDR120C GGC1P38988 300 aa3.25□□□□□ -1.89
TRM1YDR120C SEO1P39709 593 aa3.25□□□□□ -1.89
TRM1YDR120C COX16P47081 118 aa3.25□□□□□ -1.89
TRM1YDR120C SNX41Q04053 625 aa3.25□□□□□ -1.89
TRM1YDR120C DTD1Q07648 150 aaKnown RBP3.25□□□□□ -1.89
TRM1YDR120C SIA1Q12212 622 aa3.25□□□□□ -1.89
TRM1YDR120C MEC1P38111 2368 aa3.25□□□□□ -1.89
TRM1YDR120C RAD7P06779 565 aa3.24□□□□□ -1.89
TRM1YDR120C EPT1P22140 391 aa3.24□□□□□ -1.89
TRM1YDR120C SPS19P32573 292 aaKnown RBP3.24□□□□□ -1.89
TRM1YDR120C TIP20P33891 701 aa3.24□□□□□ -1.89
TRM1YDR120C TAE1P38340 232 aa3.24□□□□□ -1.89
TRM1YDR120C SER33P40510 469 aa3.24□□□□□ -1.89
TRM1YDR120C YGL185CP53100 379 aa3.24□□□□□ -1.89
TRM1YDR120C HOP2P53187 214 aa3.24□□□□□ -1.89
TRM1YDR120C SED5Q01590 340 aa3.24□□□□□ -1.89
TRM1YDR120C API2Q04413 109 aa3.24□□□□□ -1.89
TRM1YDR120C MCH1Q07376 486 aa3.24□□□□□ -1.89
TRM1YDR120C RAX2Q12465 1220 aa3.24□□□□□ -1.89
TRM1YDR120C YOL085CQ99345 113 aa3.24□□□□□ -1.89
TRM1YDR120C TPI1P00942 248 aaKnown RBP3.24□□□□□ -1.89
TRM1YDR120C POL30P15873 258 aaKnown RBP3.24□□□□□ -1.89
TRM1YDR120C DAL81P21657 970 aa3.24□□□□□ -1.89
TRM1YDR120C PPQ1P32945 549 aa3.24□□□□□ -1.89
TRM1YDR120C PET8P38921 284 aa3.24□□□□□ -1.89
TRM1YDR120C SOP4P39543 234 aaPredicted RBP3.24□□□□□ -1.89
TRM1YDR120C YEL075CP39972 122 aa3.24□□□□□ -1.89
TRM1YDR120C ASG7P46993 209 aa3.24□□□□□ -1.89
TRM1YDR120C MIM1Q08176 113 aa3.24□□□□□ -1.89
TRM1YDR120C APC9Q12107 265 aa3.24□□□□□ -1.89
TRM1YDR120C YDR018CQ12185 396 aa3.24□□□□□ -1.89
TRM1YDR120C EMP46Q12396 444 aa3.24□□□□□ -1.89
TRM1YDR120C CDC33P07260 213 aaKnown RBP3.23□□□□□ -1.89
TRM1YDR120C ERD1P16151 362 aa3.23□□□□□ -1.89
TRM1YDR120C GPI12P23797 304 aa3.23□□□□□ -1.89
TRM1YDR120C MEK1P24719 497 aaPredicted RBP3.23□□□□□ -1.89
TRM1YDR120C MCH2P36032 473 aa3.23□□□□□ -1.89
TRM1YDR120C RRT13P40042 185 aa3.23□□□□□ -1.89
TRM1YDR120C YGR266WP53326 701 aa3.23□□□□□ -1.89
TRM1YDR120C SWS2P53937 143 aa3.23□□□□□ -1.89
TRM1YDR120C VHS1Q03785 461 aa3.23□□□□□ -1.89
TRM1YDR120C UTP23Q12339 254 aaKnown RBP3.23□□□□□ -1.89
TRM1YDR120C HFA1P32874 2273 aa3.23□□□□□ -1.89
TRM1YDR120C STE2D6VTK4 431 aa3.22□□□□□ -1.89
TRM1YDR120C HIS1P00498 297 aaKnown RBP3.22□□□□□ -1.89
TRM1YDR120C CYM1P32898 989 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms