RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C REX3Q12090 404 aa1.61□□□□□ -2.15
AFR1YDR085C TY3A-GQ12173 290 aa1.61□□□□□ -2.15
AFR1YDR085C TY3A-IQ99219 290 aa1.61□□□□□ -2.15
AFR1YDR085C GPI12P23797 304 aa1.6□□□□□ -2.15
AFR1YDR085C RPC25P35718 212 aa1.6□□□□□ -2.15
AFR1YDR085C DAN1P47178 298 aa1.6□□□□□ -2.15
AFR1YDR085C FMP41P53889 259 aaKnown RBP1.6□□□□□ -2.15
AFR1YDR085C VPS60Q03390 229 aa1.6□□□□□ -2.15
AFR1YDR085C SPO77Q06134 477 aa1.6□□□□□ -2.15
AFR1YDR085C YOL019WQ08157 551 aa1.6□□□□□ -2.15
AFR1YDR085C NOT5Q12514 560 aaPredicted RBP1.6□□□□□ -2.15
AFR1YDR085C YIA6P40556 373 aa1.6□□□□□ -2.15
AFR1YDR085C MND1P53102 219 aa1.6□□□□□ -2.15
AFR1YDR085C POM33Q12164 279 aa1.6□□□□□ -2.15
AFR1YDR085C YEL009C-AA0A023PZF2 135 aa1.59□□□□□ -2.15
AFR1YDR085C CSG2P35206 410 aa1.59□□□□□ -2.15
AFR1YDR085C ARN2P38724 620 aa1.59□□□□□ -2.15
AFR1YDR085C YHI9P38765 294 aa1.59□□□□□ -2.15
AFR1YDR085C VPS45P38932 577 aa1.59□□□□□ -2.15
AFR1YDR085C IBA57P47158 497 aa1.59□□□□□ -2.15
AFR1YDR085C SDC1Q03323 175 aa1.59□□□□□ -2.15
AFR1YDR085C KRR1P25586 316 aaPredicted RBP1.58□□□□□ -2.16
AFR1YDR085C BMH1P29311 267 aaKnown RBP1.58□□□□□ -2.16
AFR1YDR085C NRG2P38082 220 aa1.58□□□□□ -2.16
AFR1YDR085C HIS2P38635 335 aa1.58□□□□□ -2.16
AFR1YDR085C KEL2P50090 882 aa1.58□□□□□ -2.16
AFR1YDR085C CAB4P53332 305 aa1.58□□□□□ -2.16
AFR1YDR085C GPN3Q06543 272 aa1.58□□□□□ -2.16
AFR1YDR085C BER1Q06688 274 aaKnown RBP1.58□□□□□ -2.16
AFR1YDR085C RAD10P06838 210 aa1.58□□□□□ -2.16
AFR1YDR085C SCO1P23833 295 aa1.58□□□□□ -2.16
AFR1YDR085C HMT1P38074 348 aa1.58□□□□□ -2.16
AFR1YDR085C YHR045WP38775 560 aa1.58□□□□□ -2.16
AFR1YDR085C TDA11P38854 504 aa1.58□□□□□ -2.16
AFR1YDR085C POP2P39008 433 aa1.58□□□□□ -2.16
AFR1YDR085C COG3P40094 801 aa1.58□□□□□ -2.16
AFR1YDR085C BAT2P47176 376 aaKnown RBP1.58□□□□□ -2.16
AFR1YDR085C SLM2P53955 656 aa1.58□□□□□ -2.16
AFR1YDR085C ECM18Q04623 453 aa1.58□□□□□ -2.16
AFR1YDR085C YMR316C-AI2HB70 103 aa1.57□□□□□ -2.16
AFR1YDR085C ILV1P00927 576 aaKnown RBP1.57□□□□□ -2.16
AFR1YDR085C COS6P53344 381 aa1.57□□□□□ -2.16
AFR1YDR085C COS2P0CX12 379 aa1.56□□□□□ -2.16
AFR1YDR085C COS3P0CX13 379 aa1.56□□□□□ -2.16
AFR1YDR085C CSM1P25651 190 aa1.56□□□□□ -2.16
AFR1YDR085C SPO19Q03029 223 aa1.56□□□□□ -2.16
AFR1YDR085C TDH1P00360 332 aaKnown RBP1.56□□□□□ -2.16
AFR1YDR085C RPS3P05750 240 aaKnown RBP1.56□□□□□ -2.16
AFR1YDR085C CAM1P29547 415 aaKnown RBP1.56□□□□□ -2.16
AFR1YDR085C YJL016WP47072 561 aa1.56□□□□□ -2.16
AFR1YDR085C DCR2Q05924 578 aa1.56□□□□□ -2.16
AFR1YDR085C MDY2Q12285 212 aa1.56□□□□□ -2.16
AFR1YDR085C SMT3Q12306 101 aaKnown RBP1.56□□□□□ -2.16
AFR1YDR085C YAL064W-BO13512 126 aa1.55□□□□□ -2.16
AFR1YDR085C STF1P01098 86 aa1.55□□□□□ -2.16
AFR1YDR085C UGA1P17649 471 aa1.55□□□□□ -2.16
AFR1YDR085C GRE3P38715 327 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
AFR1YDR085C FCY21P40039 528 aa1.55□□□□□ -2.16
AFR1YDR085C MRPL49P40858 161 aaPredicted RBP1.55□□□□□ -2.16
AFR1YDR085C GON7P46984 123 aa1.55□□□□□ -2.16
AFR1YDR085C PEX31P53203 462 aa1.55□□□□□ -2.16
AFR1YDR085C YMR114CQ04471 368 aaKnown RBP1.55□□□□□ -2.16
AFR1YDR085C BCP1Q06338 283 aa1.55□□□□□ -2.16
AFR1YDR085C YPL247CQ12523 523 aa1.55□□□□□ -2.16
AFR1YDR085C PEX3P28795 441 aa1.54□□□□□ -2.16
AFR1YDR085C GDH2P33327 1092 aaKnown RBP1.54□□□□□ -2.16
AFR1YDR085C SPT8P38915 602 aa1.54□□□□□ -2.16
AFR1YDR085C SER33P40510 469 aa1.54□□□□□ -2.16
AFR1YDR085C CPD1P53314 239 aa1.54□□□□□ -2.16
AFR1YDR085C TRM44Q02648 567 aaKnown RBP1.54□□□□□ -2.16
AFR1YDR085C SEC10Q06245 871 aa1.54□□□□□ -2.16
AFR1YDR085C EMC6Q12431 108 aa1.54□□□□□ -2.16
AFR1YDR085C YHR086W-AQ3E746 53 aa1.54□□□□□ -2.16
AFR1YDR085C FRS2P15625 503 aaKnown RBP1.54□□□□□ -2.16
AFR1YDR085C DPB2P24482 689 aaPredicted RBP1.54□□□□□ -2.16
AFR1YDR085C SFC1P33303 322 aa1.54□□□□□ -2.16
AFR1YDR085C GCD14P46959 383 aaPredicted RBP1.54□□□□□ -2.16
AFR1YDR085C PNC1P53184 216 aaKnown RBP1.54□□□□□ -2.16
AFR1YDR085C YNL260CP53846 198 aa1.54□□□□□ -2.16
AFR1YDR085C VBA1Q04301 562 aa1.54□□□□□ -2.16
AFR1YDR085C ICL1P28240 557 aaPredicted RBP1.53□□□□□ -2.16
AFR1YDR085C YHL026CP38740 315 aa1.53□□□□□ -2.16
AFR1YDR085C TIF34P40217 347 aaKnown RBP1.53□□□□□ -2.16
AFR1YDR085C YJL027CP47063 138 aaPredicted RBP1.53□□□□□ -2.16
AFR1YDR085C SFH1Q06168 426 aa1.53□□□□□ -2.16
AFR1YDR085C ADH3P07246 375 aaKnown RBP1.52□□□□□ -2.17
AFR1YDR085C PPH21P23594 369 aa1.52□□□□□ -2.17
AFR1YDR085C NPT1P39683 429 aaKnown RBP1.52□□□□□ -2.17
AFR1YDR085C AGX1P43567 385 aa1.52□□□□□ -2.17
AFR1YDR085C NIF3P53081 288 aa1.52□□□□□ -2.17
AFR1YDR085C ERV41Q04651 352 aa1.52□□□□□ -2.17
AFR1YDR085C YOS9Q99220 542 aa1.52□□□□□ -2.17
AFR1YDR085C RPC40P07703 335 aaKnown RBP1.52□□□□□ -2.17
AFR1YDR085C DRE2P36152 348 aa1.52□□□□□ -2.17
AFR1YDR085C TEM1P38987 245 aa1.52□□□□□ -2.17
AFR1YDR085C YJL028WP47062 111 aa1.52□□□□□ -2.17
AFR1YDR085C MDM34P53083 459 aa1.52□□□□□ -2.17
AFR1YDR085C YGL185CP53100 379 aa1.52□□□□□ -2.17
AFR1YDR085C CDC14Q00684 551 aa1.52□□□□□ -2.17
AFR1YDR085C ATC1Q04005 294 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms