RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C YCR023CP25351 611 aa5.04□□□□□ -1.6
SEC18YBR080C MRM2P53123 320 aa5.04□□□□□ -1.6
SEC18YBR080C AAT1Q01802 451 aa5.04□□□□□ -1.6
SEC18YBR080C SCS7Q03529 384 aa5.04□□□□□ -1.6
SEC18YBR080C UTP15Q04305 513 aaKnown RBP5.04□□□□□ -1.6
SEC18YBR080C RDL2Q08742 149 aaKnown RBP5.04□□□□□ -1.6
SEC18YBR080C RPS28AQ3E7X9 67 aaPredicted RBP5.04□□□□□ -1.6
SEC18YBR080C DNA2P38859 1522 aa5.04□□□□□ -1.6
SEC18YBR080C ERG4P25340 473 aa5.03□□□□□ -1.6
SEC18YBR080C ARN1P38731 627 aa5.03□□□□□ -1.6
SEC18YBR080C GEP4P38812 185 aa5.03□□□□□ -1.6
SEC18YBR080C NVJ1P38881 321 aa5.03□□□□□ -1.6
SEC18YBR080C ASN1P49089 572 aaKnown RBP5.03□□□□□ -1.6
SEC18YBR080C YPS5P53057 165 aa5.03□□□□□ -1.6
SEC18YBR080C BRR6P53062 197 aa5.03□□□□□ -1.6
SEC18YBR080C PET191Q02772 108 aa5.03□□□□□ -1.6
SEC18YBR080C SSK1Q07084 712 aa5.03□□□□□ -1.6
SEC18YBR080C YAP7Q08182 245 aa5.03□□□□□ -1.6
SEC18YBR080C YLR126CQ12288 251 aa5.03□□□□□ -1.6
SEC18YBR080C MRX4Q12467 430 aa5.03□□□□□ -1.6
SEC18YBR080C POM152P39685 1337 aa5.03□□□□□ -1.6
SEC18YBR080C BPT1P14772 1559 aa5.03□□□□□ -1.6
SEC18YBR080C YOR1P53049 1477 aa5.03□□□□□ -1.6
SEC18YBR080C YIL029CP40538 142 aa5.03□□□□□ -1.6
SEC18YBR080C AIM23P47015 356 aa5.03□□□□□ -1.6
SEC18YBR080C ALB1P47019 175 aaPredicted RBP5.03□□□□□ -1.6
SEC18YBR080C GLO2Q05584 274 aa5.03□□□□□ -1.6
SEC18YBR080C YLR031WQ07978 186 aa5.03□□□□□ -1.6
SEC18YBR080C THI20Q08224 551 aa5.03□□□□□ -1.6
SEC18YBR080C YLR361C-AQ3E795 98 aa5.03□□□□□ -1.6
SEC18YBR080C EDE1P34216 1381 aa5.03□□□□□ -1.6
SEC18YBR080C CYC7P00045 113 aa5.02□□□□□ -1.61
SEC18YBR080C ALG7P07286 448 aa5.02□□□□□ -1.61
SEC18YBR080C FRE2P36033 711 aa5.02□□□□□ -1.61
SEC18YBR080C SPC34P36131 295 aa5.02□□□□□ -1.61
SEC18YBR080C MED8P38304 223 aa5.02□□□□□ -1.61
SEC18YBR080C MTC4P38335 694 aaKnown RBP5.02□□□□□ -1.61
SEC18YBR080C PCL5P38794 229 aa5.02□□□□□ -1.61
SEC18YBR080C PET8P38921 284 aa5.02□□□□□ -1.61
SEC18YBR080C PHB1P40961 287 aa5.02□□□□□ -1.61
SEC18YBR080C YGR201CP42936 225 aa5.02□□□□□ -1.61
SEC18YBR080C RRT5P43607 289 aa5.02□□□□□ -1.61
SEC18YBR080C MCM22P47167 239 aa5.02□□□□□ -1.61
SEC18YBR080C YLR036CQ07986 203 aa5.02□□□□□ -1.61
SEC18YBR080C YLR050CQ12155 161 aaKnown RBP5.02□□□□□ -1.61
SEC18YBR080C RFM1Q12192 310 aa5.02□□□□□ -1.61
SEC18YBR080C FOL3Q12676 427 aaPredicted RBP5.02□□□□□ -1.61
SEC18YBR080C YPK9Q12697 1472 aa5.02□□□□□ -1.61
SEC18YBR080C AQY1P0CD91 305 aa5.02□□□□□ -1.61
SEC18YBR080C KAR9P32526 644 aa5.02□□□□□ -1.61
SEC18YBR080C YBR062CP38239 180 aa5.02□□□□□ -1.61
SEC18YBR080C SLM6P38343 150 aa5.02□□□□□ -1.61
SEC18YBR080C NDT80P38830 627 aa5.02□□□□□ -1.61
SEC18YBR080C MDM31P38880 579 aa5.02□□□□□ -1.61
SEC18YBR080C KRE29P40026 464 aa5.02□□□□□ -1.61
SEC18YBR080C GUF1P46943 645 aa5.02□□□□□ -1.61
SEC18YBR080C YJR030CP47101 745 aa5.02□□□□□ -1.61
SEC18YBR080C HSK3P69852 69 aa5.02□□□□□ -1.61
SEC18YBR080C YMR027WQ04371 470 aa5.02□□□□□ -1.61
SEC18YBR080C SEI1Q06058 285 aa5.02□□□□□ -1.61
SEC18YBR080C MCA1Q08601 432 aa5.02□□□□□ -1.61
SEC18YBR080C YDL199CQ12407 687 aa5.02□□□□□ -1.61
SEC18YBR080C SPS100P13130 326 aa5.01□□□□□ -1.61
SEC18YBR080C PHA2P32452 334 aa5.01□□□□□ -1.61
SEC18YBR080C ANR2P36090 516 aaPredicted RBP5.01□□□□□ -1.61
SEC18YBR080C CSM2P40465 213 aa5.01□□□□□ -1.61
SEC18YBR080C YIL067CP40514 678 aa5.01□□□□□ -1.61
SEC18YBR080C UFE1P41834 346 aa5.01□□□□□ -1.61
SEC18YBR080C SWC4P53201 476 aa5.01□□□□□ -1.61
SEC18YBR080C COS6P53344 381 aa5.01□□□□□ -1.61
SEC18YBR080C BET5Q03630 159 aa5.01□□□□□ -1.61
SEC18YBR080C HEM25Q07534 307 aa5.01□□□□□ -1.61
SEC18YBR080C RAX2Q12465 1220 aa5.01□□□□□ -1.61
SEC18YBR080C YPR064WQ12492 139 aa5.01□□□□□ -1.61
SEC18YBR080C EFG1Q3E705 233 aaKnown RBP5.01□□□□□ -1.61
SEC18YBR080C YPL119C-AQ3E751 87 aa5.01□□□□□ -1.61
SEC18YBR080C MRS1P07266 363 aa5□□□□□ -1.61
SEC18YBR080C DBF2P22204 572 aa5□□□□□ -1.61
SEC18YBR080C CAM1P29547 415 aaKnown RBP5□□□□□ -1.61
SEC18YBR080C PDC2P32896 925 aa5□□□□□ -1.61
SEC18YBR080C YBR137WP38276 179 aa5□□□□□ -1.61
SEC18YBR080C CPR7P47103 393 aa5□□□□□ -1.61
SEC18YBR080C ORC5P50874 479 aa5□□□□□ -1.61
SEC18YBR080C UBC12P52491 188 aa5□□□□□ -1.61
SEC18YBR080C GTR2P53290 341 aa5□□□□□ -1.61
SEC18YBR080C YPR098CQ06089 161 aa5□□□□□ -1.61
SEC18YBR080C TMA10Q06177 86 aa5□□□□□ -1.61
SEC18YBR080C TPO3Q06451 622 aa5□□□□□ -1.61
SEC18YBR080C FRE8Q12209 686 aa5□□□□□ -1.61
SEC18YBR080C SNQ2P32568 1501 aaKnown RBP5□□□□□ -1.61
SEC18YBR080C YCR100CP25606 316 aa5□□□□□ -1.61
SEC18YBR080C TIP1P27654 210 aaPredicted RBP5□□□□□ -1.61
SEC18YBR080C ECM33P38248 429 aaKnown RBP5□□□□□ -1.61
SEC18YBR080C MPA43P53583 542 aaPredicted RBP5□□□□□ -1.61
SEC18YBR080C NRD1P53617 575 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
SEC18YBR080C DYN2Q02647 92 aa5□□□□□ -1.61
SEC18YBR080C ODC1Q03028 310 aa5□□□□□ -1.61
SEC18YBR080C PEX30Q06169 523 aa5□□□□□ -1.61
SEC18YBR080C MCT1Q12283 360 aa5□□□□□ -1.61
SEC18YBR080C BI3Q9ZZW7 517 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms