RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	YKL018C-A	Q3E7A7	99 aa		3.87	□□□□□ -1.79
SHE1	YBL031W	YKR104W	P0CE69	306 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	STF2	P16965	84 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	RNA14	P25298	677 aa	Known RBP	3.86	□□□□□ -1.79
SHE1	YBL031W	AHC2	P25649	128 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	CAT2	P32796	670 aa	Known RBP	3.86	□□□□□ -1.79
SHE1	YBL031W	DAD2	P36162	133 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	GPX2	P38143	162 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	YPT35	P38815	214 aa	Known RBP	3.86	□□□□□ -1.79
SHE1	YBL031W	MST28	P39552	234 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	YJL213W	P40896	331 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	MDE1	P47095	244 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	PAC10	P48363	199 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	YDL186W	P48568	277 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	COS10	P52924	374 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	SWC4	P53201	476 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	RHO5	P53879	331 aa	Known RBP	3.86	□□□□□ -1.79
SHE1	YBL031W	NUP49	Q02199	472 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	NUP116	Q02630	1113 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	MET31	Q03081	177 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	NDD1	Q08887	554 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	YPQ1	Q12010	308 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	PPT2	Q12036	173 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	THP3	Q12049	470 aa	Known RBP	3.86	□□□□□ -1.79
SHE1	YBL031W	YPR022C	Q12139	1133 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	YPR011C	Q12251	326 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	ORT1	Q12375	292 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	MRX4	Q12467	430 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	SNF8	Q12483	233 aa		3.86	□□□□□ -1.79
SHE1	YBL031W	ILV5	P06168	395 aa	Known RBP	3.85	□□□□□ -1.79
SHE1	YBL031W	CDC21	P06785	304 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	HYM1	P32464	399 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	KRE6	P32486	720 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	SDH3	P33421	198 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	IML3	P38265	245 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	IPI1	P38803	334 aa	Predicted RBP	3.85	□□□□□ -1.79
SHE1	YBL031W	SBE22	P38814	852 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	YHR127W	P38833	243 aa	Known RBP	3.85	□□□□□ -1.79
SHE1	YBL031W	WSS1	P38838	269 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	NVJ1	P38881	321 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	MLH1	P38920	769 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	COG3	P40094	801 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	MPM1	P40364	252 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	SNX4	P47057	423 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	YAE1	P47118	141 aa	Predicted RBP	3.85	□□□□□ -1.79
SHE1	YBL031W	TPN1	P53099	579 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	BET5	Q03630	159 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	YML108W	Q03759	105 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	ASR1	Q06834	288 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	SLF1	Q12034	447 aa	Known RBP	3.85	□□□□□ -1.79
SHE1	YBL031W	SIA1	Q12212	622 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	YDR061W	Q12298	539 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	RTR2	Q12378	196 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	SUS1	Q6WNK7	96 aa		3.85	□□□□□ -1.79
SHE1	YBL031W	DST1	P07273	309 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	MER1	P16523	270 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	RPL24B	P24000	155 aa	Known RBP	3.84	□□□□□ -1.79
SHE1	YBL031W	TAH1	P25638	111 aa	Predicted RBP	3.84	□□□□□ -1.79
SHE1	YBL031W	OAC1	P32332	324 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	SPT14	P32363	452 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	SIF2	P38262	535 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	INM1	P38710	295 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	BIG1	P38813	335 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	GGC1	P38988	300 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	RRG9	P40156	214 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	OSW5	P40219	148 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	APQ12	P40532	138 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	GDS1	P41913	522 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	APS3	P47064	194 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	NBP35	P52920	328 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	ROG1	P53118	685 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	YGL101W	P53144	215 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	YMR181C	Q03231	154 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	EMI1	Q04406	187 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	YMR317W	Q04893	1140 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	ARR1	Q06596	294 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	YFH1	Q07540	174 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	SRL2	Q12020	392 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	YGK3	Q12222	375 aa	Predicted RBP	3.84	□□□□□ -1.79
SHE1	YBL031W	FRE6	Q12473	712 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	PCL9	Q12477	304 aa		3.84	□□□□□ -1.79
SHE1	YBL031W	RRP12	Q12754	1228 aa	Known RBP	3.84	□□□□□ -1.79
SHE1	YBL031W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.84	□□□□□ -1.79
SHE1	YBL031W	YOL163W	P0CF20	169 aa		3.83	□□□□□ -1.8
SHE1	YBL031W	ZWF1	P11412	505 aa	Known RBP	3.83	□□□□□ -1.8
SHE1	YBL031W	SAR1	P20606	190 aa	Known RBP	3.83	□□□□□ -1.8
SHE1	YBL031W	MCK1	P21965	375 aa	Known RBP	3.83	□□□□□ -1.8
SHE1	YBL031W	PEX34	P25584	144 aa		3.83	□□□□□ -1.8
SHE1	YBL031W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.83	□□□□□ -1.8	not detected
SHE1	YBL031W	SEC17	P32602	292 aa		3.83	□□□□□ -1.8
SHE1	YBL031W	CLG1	P35190	452 aa		3.83	□□□□□ -1.8
SHE1	YBL031W	KKQ8	P36004	724 aa		3.83	□□□□□ -1.8
SHE1	YBL031W	MRPL4	P36517	319 aa		3.83	□□□□□ -1.8
SHE1	YBL031W	NAT2	P37293	288 aa		3.83	□□□□□ -1.8
SHE1	YBL031W	YHR035W	P38769	630 aa		3.83	□□□□□ -1.8
SHE1	YBL031W	YER137C	P40083	148 aa	Known RBP	3.83	□□□□□ -1.8
SHE1	YBL031W	PRE6	P40303	254 aa	Known RBP	3.83	□□□□□ -1.8
SHE1	YBL031W	IRC18	P47056	224 aa		3.83	□□□□□ -1.8
SHE1	YBL031W	JHD2	P47156	728 aa	Predicted RBP	3.83	□□□□□ -1.8
SHE1	YBL031W	RRN9	P53437	365 aa		3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms