RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	YLR112W	Q12130	139 aa		4.38	□□□□□ -1.71
ECM1	YAL059W	YDR018C	Q12185	396 aa		4.38	□□□□□ -1.71
ECM1	YAL059W	TFC7	Q12415	435 aa		4.38	□□□□□ -1.71
ECM1	YAL059W	ARP6	Q12509	438 aa		4.38	□□□□□ -1.71
ECM1	YAL059W	PET54	P10834	293 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	SPS100	P13130	326 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	CTA1	P15202	515 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	INO2	P26798	304 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	ATG12	P38316	186 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	KRE29	P40026	464 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	AIM23	P47015	356 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	YPS5	P53057	165 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	VHT1	P53241	593 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	MSO1	P53604	210 aa	Known RBP	4.37	□□□□□ -1.71
ECM1	YAL059W	YNR066C	P53752	436 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	YNL234W	P53857	426 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	NUP49	Q02199	472 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	ABF2	Q02486	183 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	ARO80	Q04052	950 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	YMR027W	Q04371	470 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	INM2	Q05533	292 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	NOC4	Q06512	552 aa	Predicted RBP	4.37	□□□□□ -1.71
ECM1	YAL059W	TAF10	Q12030	206 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	YLR126C	Q12288	251 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	RPN6	Q12377	434 aa		4.37	□□□□□ -1.71
ECM1	YAL059W	YBR096W	P38256	230 aa		4.36	□□□□□ -1.71
ECM1	YAL059W	YBP1	P38315	674 aa		4.36	□□□□□ -1.71
ECM1	YAL059W	WSC4	P38739	605 aa		4.36	□□□□□ -1.71
ECM1	YAL059W	EDC3	P39998	551 aa	Known RBP	4.36	□□□□□ -1.71
ECM1	YAL059W	OST3	P48439	350 aa		4.36	□□□□□ -1.71
ECM1	YAL059W	YGL082W	P53155	381 aa		4.36	□□□□□ -1.71
ECM1	YAL059W	YMR166C	Q03829	368 aa		4.36	□□□□□ -1.71
ECM1	YAL059W	THI20	Q08224	551 aa		4.36	□□□□□ -1.71
ECM1	YAL059W	TPO4	Q12256	659 aa		4.36	□□□□□ -1.71
ECM1	YAL059W	SAL1	D6W196	494 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	SPT3	P06844	337 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	CUP2	P15315	225 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	GLN3	P18494	730 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
ECM1	YAL059W	CLG1	P35190	452 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	YKL075C	P36083	450 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	ARC40	P38328	384 aa	Known RBP	4.35	□□□□□ -1.71
ECM1	YAL059W	RRP3	P38712	501 aa	Known RBP	4.35	□□□□□ -1.71
ECM1	YAL059W	YHR127W	P38833	243 aa	Known RBP	4.35	□□□□□ -1.71
ECM1	YAL059W	COS4	P43542	379 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	CTK3	P46963	296 aa	Predicted RBP	4.35	□□□□□ -1.71
ECM1	YAL059W	YJR054W	P47114	497 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	JAC1	P53193	184 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	POP6	P53218	158 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	RNY1	Q02933	434 aa	Known RBP	4.35	□□□□□ -1.71
ECM1	YAL059W	YML096W	Q04489	525 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	TAF9	Q05027	157 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	BCH1	Q05029	724 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	DPP1	Q05521	289 aa		4.35	□□□□□ -1.71
ECM1	YAL059W	YLR050C	Q12155	161 aa	Known RBP	4.35	□□□□□ -1.71
ECM1	YAL059W	PHO80	P20052	293 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	IFM1	P25038	676 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	YCR043C	P25361	127 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	TAH1	P25638	111 aa	Predicted RBP	4.34	□□□□□ -1.71
ECM1	YAL059W	PDC2	P32896	925 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	TIP20	P33891	701 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	MRPL3	P36516	390 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	LEU5	P38702	357 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	GOS1	P38736	223 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	MTC6	P38849	526 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	MST28	P39552	234 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	VPS52	P39904	641 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	SNX4	P47057	423 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	MOG1	P47123	218 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	COS1	P53822	381 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	PDR17	P53844	350 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	TDA1	Q03533	586 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	YET2	Q04210	160 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	YPR127W	Q06494	345 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	YLR031W	Q07978	186 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	YLR036C	Q07986	203 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	SRL1	Q08673	210 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	RPN8	Q08723	338 aa	Known RBP	4.34	□□□□□ -1.71
ECM1	YAL059W	MMT2	Q08970	484 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	FCY22	Q12119	530 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	USB1	Q12208	290 aa	Known RBP	4.34	□□□□□ -1.71
ECM1	YAL059W	SFM1	Q12314	213 aa		4.34	□□□□□ -1.71
ECM1	YAL059W	TAF2	P23255	1407 aa		4.33	□□□□□ -1.72
ECM1	YAL059W	YOL163W	P0CF20	169 aa		4.33	□□□□□ -1.72
ECM1	YAL059W	YFL068W	P0CX99	160 aa		4.33	□□□□□ -1.72
ECM1	YAL059W	YLL066W-A	P0CY00	160 aa		4.33	□□□□□ -1.72
ECM1	YAL059W	YLL067W-A	P0CY01	160 aa		4.33	□□□□□ -1.72
ECM1	YAL059W	SAM2	P19358	384 aa	Known RBP	4.33	□□□□□ -1.72
ECM1	YAL059W	GLC7	P32598	312 aa	Known RBP	4.33	□□□□□ -1.72
ECM1	YAL059W	UPS2	P35200	230 aa		4.33	□□□□□ -1.72
ECM1	YAL059W	SSH1	P38353	490 aa	Known RBP	4.33	□□□□□ -1.72
ECM1	YAL059W	YER076C	P40049	302 aa		4.33	□□□□□ -1.72
ECM1	YAL059W	MRPL49	P40858	161 aa	Predicted RBP	4.33	□□□□□ -1.72
ECM1	YAL059W	GWT1	P47026	490 aa		4.33	□□□□□ -1.72
ECM1	YAL059W	SCS3	P53012	380 aa		4.33	□□□□□ -1.72
ECM1	YAL059W	YGL039W	P53183	348 aa	Known RBP	4.33	□□□□□ -1.72
ECM1	YAL059W	COS6	P53344	381 aa		4.33	□□□□□ -1.72
ECM1	YAL059W	YMR315W	Q04869	349 aa	Known RBP	4.33	□□□□□ -1.72
ECM1	YAL059W	PEX30	Q06169	523 aa		4.33	□□□□□ -1.72
ECM1	YAL059W	YLR446W	Q06204	433 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 222.3 ms