RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 NAM8Q00539 523 aaKnown RBP9.15□□□□□ -0.94
RDN18-1RDN18-1 PRM15Q03262 622 aa9.15□□□□□ -0.94
RDN18-1RDN18-1 SIZ1Q04195 904 aa9.15□□□□□ -0.94
RDN18-1RDN18-1 ATP14Q12349 124 aa9.15□□□□□ -0.94
RDN18-1RDN18-1 ODC2Q99297 307 aa9.15□□□□□ -0.94
RDN18-1RDN18-1 FSH3Q99369 266 aa9.15□□□□□ -0.94
RDN18-1RDN18-1 GLT1Q12680 2145 aaKnown RBP9.15□□□□□ -0.95
RDN18-1RDN18-1 QDR1P40475 563 aa9.15□□□□□ -0.95
RDN18-1RDN18-1 PEX25Q02969 394 aa9.15□□□□□ -0.95
RDN18-1RDN18-1 ISU1Q03020 165 aa9.15□□□□□ -0.95
RDN18-1RDN18-1 TPP1Q03796 238 aa9.15□□□□□ -0.95
RDN18-1RDN18-1 YOR385WQ08909 290 aa9.15□□□□□ -0.95
RDN18-1RDN18-1 FRE7Q12333 620 aa9.15□□□□□ -0.95
RDN18-1RDN18-1 TDH2P00358 332 aaKnown RBP9.14□□□□□ -0.95
RDN18-1RDN18-1 MATALPHA1P0CY06 175 aa9.14□□□□□ -0.95
RDN18-1RDN18-1 HMLALPHA1P0CY07 175 aa9.14□□□□□ -0.95
RDN18-1RDN18-1 SRP102P36057 244 aaPredicted RBP9.14□□□□□ -0.95
RDN18-1RDN18-1 SYS1P41544 203 aa9.14□□□□□ -0.95
RDN18-1RDN18-1 POP6P53218 158 aa9.14□□□□□ -0.95
RDN18-1RDN18-1 ARG5,6Q01217 863 aa9.14□□□□□ -0.95
RDN18-1RDN18-1 AIM17P23180 465 aaKnown RBP9.13□□□□□ -0.95
RDN18-1RDN18-1 DBP2P24783 546 aaKnown RBP9.13□□□□□ -0.95
RDN18-1RDN18-1 STE50P25344 346 aa9.13□□□□□ -0.95
RDN18-1RDN18-1 PET18P25362 215 aa9.13□□□□□ -0.95
RDN18-1RDN18-1 MRP17P28778 131 aa9.13□□□□□ -0.95
RDN18-1RDN18-1 MSS1P32559 526 aaPredicted RBP9.13□□□□□ -0.95
RDN18-1RDN18-1 SEF1P34228 1148 aa9.13□□□□□ -0.95
RDN18-1RDN18-1 YIL067CP40514 678 aa9.13□□□□□ -0.95
RDN18-1RDN18-1 GPI14P47088 403 aaKnown RBP9.13□□□□□ -0.95
RDN18-1RDN18-1 CUZ1P53899 274 aa9.13□□□□□ -0.95
RDN18-1RDN18-1 YLR152CP54072 576 aa9.13□□□□□ -0.95
RDN18-1RDN18-1 CTF19Q02732 369 aa9.13□□□□□ -0.95
RDN18-1RDN18-1 IRC19Q07843 230 aa9.13□□□□□ -0.95
RDN18-1RDN18-1 HMS1Q12398 434 aa9.13□□□□□ -0.95
RDN18-1RDN18-1 CHO1P08456 276 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 PUT1P09368 476 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 MEK1P24719 497 aaPredicted RBP9.12□□□□□ -0.95
RDN18-1RDN18-1 MKK2P32491 506 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 TAF14P35189 244 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 PTI1P39927 425 aaPredicted RBP9.12□□□□□ -0.95
RDN18-1RDN18-1 SER3P40054 469 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 BUD8P41698 603 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 RMD9P53140 646 aaKnown RBP9.12□□□□□ -0.95
RDN18-1RDN18-1 YGR066CP53242 292 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 PDR16P53860 351 aaKnown RBP9.12□□□□□ -0.95
RDN18-1RDN18-1 KAP120Q02932 1032 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 MIM1Q08176 113 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 PHO2P07269 559 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 SCO1P23833 295 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 PMT2P31382 759 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 SRY1P36007 326 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 ALG3P38179 458 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 NIT3P49954 291 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 OKP1P53298 406 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 APM1Q00776 475 aaPredicted RBP9.12□□□□□ -0.95
RDN18-1RDN18-1 LAP3Q01532 483 aaKnown RBP RIP-Chip data9.12□□□□□ -0.95not detected
RDN18-1RDN18-1 REX3Q12090 404 aa9.12□□□□□ -0.95
RDN18-1RDN18-1 NOP56Q12460 504 aaKnown RBP RIP-Chip data9.12□□□□□ -0.95not detected
RDN18-1RDN18-1 GCD1P09032 578 aaPredicted RBP9.11□□□□□ -0.95
RDN18-1RDN18-1 YCR061WP25639 631 aa9.11□□□□□ -0.95
RDN18-1RDN18-1 SUA5P32579 426 aa9.11□□□□□ -0.95
RDN18-1RDN18-1 SSH1P38353 490 aaKnown RBP9.11□□□□□ -0.95
RDN18-1RDN18-1 OSH7P38755 437 aa9.11□□□□□ -0.95
RDN18-1RDN18-1 AIM46P38885 310 aa9.11□□□□□ -0.95
RDN18-1RDN18-1 BXI1P48558 297 aa9.11□□□□□ -0.95
RDN18-1RDN18-1 SLI1P53304 468 aa9.11□□□□□ -0.95
RDN18-1RDN18-1 RSM27P53305 110 aa9.11□□□□□ -0.95
RDN18-1RDN18-1 YML108WQ03759 105 aa9.11□□□□□ -0.95
RDN18-1RDN18-1 YPR147CQ06522 304 aaKnown RBP9.11□□□□□ -0.95
RDN18-1RDN18-1 SYC1Q08553 188 aaPredicted RBP9.11□□□□□ -0.95
RDN18-1RDN18-1 FEX1Q08913 375 aa9.11□□□□□ -0.95
RDN18-1RDN18-1 SNC2P33328 115 aa9.1□□□□□ -0.95
RDN18-1RDN18-1 NAT2P37293 288 aa9.1□□□□□ -0.95
RDN18-1RDN18-1 CIN2P46670 268 aa9.1□□□□□ -0.95
RDN18-1RDN18-1 LCL3P53153 274 aa9.1□□□□□ -0.95
RDN18-1RDN18-1 YGR126WP53274 230 aa9.1□□□□□ -0.95
RDN18-1RDN18-1 TRM13Q12383 476 aa9.1□□□□□ -0.95
RDN18-1RDN18-1 CTA1P15202 515 aa9.1□□□□□ -0.95
RDN18-1RDN18-1 DLS1P40366 167 aa9.1□□□□□ -0.95
RDN18-1RDN18-1 TAD2P47058 250 aa9.1□□□□□ -0.95
RDN18-1RDN18-1 MTM1P53320 366 aa9.1□□□□□ -0.95
RDN18-1RDN18-1 SWM1Q12379 170 aa9.1□□□□□ -0.95
RDN18-1RDN18-1 PAR32Q12515 295 aaKnown RBP9.1□□□□□ -0.95
RDN18-1RDN18-1 YBR085C-AO43137 85 aa9.09□□□□□ -0.95
RDN18-1RDN18-1 HOP09932 586 aa9.09□□□□□ -0.95
RDN18-1RDN18-1 HOM3P10869 527 aa9.09□□□□□ -0.95
RDN18-1RDN18-1 URA6P15700 204 aa9.09□□□□□ -0.95
RDN18-1RDN18-1 PCL1P24867 279 aa9.09□□□□□ -0.95
RDN18-1RDN18-1 KRR1P25586 316 aaPredicted RBP9.09□□□□□ -0.95
RDN18-1RDN18-1 CWH43P25618 953 aa9.09□□□□□ -0.95
RDN18-1RDN18-1 EHD3P28817 500 aa9.09□□□□□ -0.95
RDN18-1RDN18-1 NAB2P32505 525 aaKnown RBP RIP-Chip data9.09□□□□□ -0.95not detected
RDN18-1RDN18-1 MRPL27P36526 146 aaPredicted RBP9.09□□□□□ -0.95
RDN18-1RDN18-1 UBC12P52491 188 aa9.09□□□□□ -0.95
RDN18-1RDN18-1 SCW4P53334 386 aaKnown RBP9.09□□□□□ -0.95
RDN18-1RDN18-1 NRM1P53718 249 aa9.09□□□□□ -0.95
RDN18-1RDN18-1 INN1P53901 409 aa9.09□□□□□ -0.95
RDN18-1RDN18-1 YDL129WQ07555 291 aa9.09□□□□□ -0.95
RDN18-1RDN18-1 AEP3Q12089 606 aa9.09□□□□□ -0.95
RDN18-1RDN18-1 BLM10P43583 2143 aa9.09□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms