RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 AFG3L2Q9Y4W6 797 aa17.45■□□□□ 0.38
CTSB-203ENST00000420692 HSF2BPO75031 334 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 MMEP08473 750 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 MARCKSL1P49006 195 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 DLK2Q6UY11 383 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 CPNE8Q86YQ8 564 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 TMC2Q8TDI7 906 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 ATP6V0A1Q93050 837 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 C17orf75Q9HAS0 396 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 ERVK-5Q9HDB9 667 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 GOLGA8KD6RF30 607 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 TTI1O43156 1089 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 SHOX2O60902 331 aaPredicted RBP17.44■□□□□ 0.38
CTSB-203ENST00000420692 RTN2O75298 545 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 PSAPP07602 524 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 COPB2P35606 906 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 FLT3P36888 993 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 HSPA9P38646 679 aaKnown RBP17.44■□□□□ 0.38
CTSB-203ENST00000420692 WNT7BP56706 349 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 ZNF211Q13398 564 aaPredicted RBP17.44■□□□□ 0.38
CTSB-203ENST00000420692 NAA35Q5VZE5 725 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 SV2AQ7L0J3 742 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 EIF1ADQ8N9N8 165 aaKnown RBP17.44■□□□□ 0.38
CTSB-203ENST00000420692 FAM76AQ8TAV0 307 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 DDX1Q92499 740 aaKnown RBP17.44■□□□□ 0.38
CTSB-203ENST00000420692 SEC14L1Q92503 715 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 ZNF516Q92618 1163 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 DHX38Q92620 1227 aaKnown RBP17.44■□□□□ 0.38
CTSB-203ENST00000420692 KRT35Q92764 455 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 CARD9Q9H257 536 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 ACAD9Q9H845 621 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 TMOD4Q9NZQ9 345 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 ARHGAP28Q9P2N2 729 aa17.44■□□□□ 0.38
CTSB-203ENST00000420692 SEPT9Q9UHD8 586 aaPredicted RBP17.44■□□□□ 0.38
CTSB-203ENST00000420692 LOC285556D6RIA3 1793 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 TULP1O00294 542 aaPredicted RBP17.43■□□□□ 0.38
CTSB-203ENST00000420692 ATMINO43313 823 aaPredicted RBP17.43■□□□□ 0.38
CTSB-203ENST00000420692 OPA1O60313 960 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 GRIN3BO60391 1043 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 DGAT1O75907 488 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 CLSTN1O94985 981 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 CALCAP01258 141 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 RTP1P59025 263 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 GPC5P78333 572 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 UAP1Q16222 522 aaPredicted RBP17.43■□□□□ 0.38
CTSB-203ENST00000420692 APOBEC3FQ8IUX4 373 aaKnown RBP17.43■□□□□ 0.38
CTSB-203ENST00000420692 RHOT2Q8IXI1 618 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 POMGNT1Q8WZA1 660 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 RNPC3Q96LT9 517 aaKnown RBP17.43■□□□□ 0.38
CTSB-203ENST00000420692 SGIP1Q9BQI5 828 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 WDR90Q96KV7 1748 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 DAPK3O43293 454 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 GZMAP12544 262 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 CNTN2Q02246 1040 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 CFAP58Q5T655 872 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 ZDHHC14Q8IZN3 488 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 SLITRK6Q9H5Y7 841 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 RAB20Q9NX57 234 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 GGA3Q9NZ52 723 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 CTTNBP2NLQ9P2B4 639 aa17.43■□□□□ 0.38
CTSB-203ENST00000420692 CYP11B1P15538 503 aa17.42■□□□□ 0.38
CTSB-203ENST00000420692 MFAP3P55082 362 aa17.42■□□□□ 0.38
CTSB-203ENST00000420692 CUL1Q13616 776 aa17.42■□□□□ 0.38
CTSB-203ENST00000420692 C11orf63Q6NUN7 778 aa17.42■□□□□ 0.38
CTSB-203ENST00000420692 ADAT2Q7Z6V5 191 aaKnown RBP17.42■□□□□ 0.38
CTSB-203ENST00000420692 CD302Q8IX05 232 aa17.42■□□□□ 0.38
CTSB-203ENST00000420692 SH2D3CQ8N5H7 860 aa17.42■□□□□ 0.38
CTSB-203ENST00000420692 FBXL13Q8NEE6 735 aa17.42■□□□□ 0.38
CTSB-203ENST00000420692 MCPH1Q8NEM0 835 aa17.42■□□□□ 0.38
CTSB-203ENST00000420692 PI4K2AQ9BTU6 479 aa17.42■□□□□ 0.38
CTSB-203ENST00000420692 POLR3FQ9H1D9 316 aaPredicted RBP17.42■□□□□ 0.38
CTSB-203ENST00000420692 MTA2O94776 668 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 SUPT20HL2P0C7V6 817 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 PEX5P50542 639 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 PPFIA1Q13136 1202 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 PRKG1Q13976 671 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 SUPT20HL1Q3ZLR7 823 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 BRDTQ58F21 947 aaPredicted RBP17.41■□□□□ 0.38
CTSB-203ENST00000420692 C15orf39Q6ZRI6 1047 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 GPD1LQ8N335 351 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 GOLGA6L1Q8N7Z2 621 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 FAM213AQ9BRX8 229 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 HAPLN2Q9GZV7 340 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 DIS3Q9Y2L1 958 aaKnown RBP17.41■□□□□ 0.38
CTSB-203ENST00000420692 H0YGN5 161 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 HNRNPDLO14979 420 aaKnown RBP17.41■□□□□ 0.38
CTSB-203ENST00000420692 DLATP10515 647 aaKnown RBP17.41■□□□□ 0.38
CTSB-203ENST00000420692 GARTP22102 1010 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 PTENP60484 403 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 HLTFQ14527 1009 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTSB-203ENST00000420692 MTERF2Q49AM1 385 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 NOL9Q5SY16 702 aaKnown RBP17.41■□□□□ 0.38
CTSB-203ENST00000420692 CYFIP1Q7L576 1253 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 ATP8B4Q8TF62 1192 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTSB-203ENST00000420692 CD101Q93033 1021 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 BTBD6Q96KE9 485 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 CEP89Q96ST8 783 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 ATP6V0A4Q9HBG4 840 aa17.41■□□□□ 0.38
CTSB-203ENST00000420692 GPRC5DQ9NZD1 345 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms