RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 BIG1P38813 335 aa2.17□□□□□ -2.06
snR43snR43 LNP1P38878 278 aa2.17□□□□□ -2.06
snR43snR43 ALP1P38971 573 aa2.17□□□□□ -2.06
snR43snR43 GDI1P39958 451 aaKnown RBP2.17□□□□□ -2.06
snR43snR43 KRE29P40026 464 aa2.17□□□□□ -2.06
snR43snR43 LAS21P40367 830 aa2.17□□□□□ -2.06
snR43snR43 YIL166CP40445 542 aa2.17□□□□□ -2.06
snR43snR43 IMA5P40884 581 aa2.17□□□□□ -2.06
snR43snR43 DIA3P52290 468 aa2.17□□□□□ -2.06
snR43snR43 MRM2P53123 320 aa2.17□□□□□ -2.06
snR43snR43 MPC1P53157 130 aaKnown RBP2.17□□□□□ -2.06
snR43snR43 TWF1P53250 332 aa2.17□□□□□ -2.06
snR43snR43 BUD17P53727 317 aa2.17□□□□□ -2.06
snR43snR43 YML119WQ03208 357 aa2.17□□□□□ -2.06
snR43snR43 NGL2Q03264 515 aaKnown RBP2.17□□□□□ -2.06
snR43snR43 YDR391CQ04170 232 aa2.17□□□□□ -2.06
snR43snR43 GMC1Q04399 608 aa2.17□□□□□ -2.06
snR43snR43 SEC13Q04491 297 aaKnown RBP2.17□□□□□ -2.06
snR43snR43 YMR317WQ04893 1140 aa2.17□□□□□ -2.06
snR43snR43 SPO77Q06134 477 aa2.17□□□□□ -2.06
snR43snR43 ARO10Q06408 635 aa2.17□□□□□ -2.06
snR43snR43 TPO3Q06451 622 aa2.17□□□□□ -2.06
snR43snR43 YPR127WQ06494 345 aa2.17□□□□□ -2.06
snR43snR43 ARR3Q06598 404 aa2.17□□□□□ -2.06
snR43snR43 SYO1Q07395 620 aa2.17□□□□□ -2.06
snR43snR43 MFG1Q07684 458 aa2.17□□□□□ -2.06
snR43snR43 RRT8Q08219 342 aa2.17□□□□□ -2.06
snR43snR43 SIA1Q12212 622 aa2.17□□□□□ -2.06
snR43snR43 IZH2Q12442 317 aa2.17□□□□□ -2.06
snR43snR43 ERP4Q12450 207 aa2.17□□□□□ -2.06
snR43snR43 ATP6P00854 259 aa2.16□□□□□ -2.06
snR43snR43 MF(ALPHA)1P01149 165 aa2.16□□□□□ -2.06
snR43snR43 ARG3P05150 338 aa2.16□□□□□ -2.06
snR43snR43 RPL6BP05739 176 aaKnown RBP2.16□□□□□ -2.06
snR43snR43 TPK2P06245 380 aa2.16□□□□□ -2.06
snR43snR43 YMR085WP0CF18 432 aa2.16□□□□□ -2.06
snR43snR43 YOL163WP0CF20 169 aa2.16□□□□□ -2.06
snR43snR43 HNM1P19807 563 aa2.16□□□□□ -2.06
snR43snR43 URE2P23202 354 aaKnown RBP2.16□□□□□ -2.06
snR43snR43 GIT1P25346 518 aa2.16□□□□□ -2.06
snR43snR43 GFD2P25370 566 aaKnown RBP2.16□□□□□ -2.06
snR43snR43 PRE2P30656 287 aaKnown RBP2.16□□□□□ -2.06
snR43snR43 SNC1P31109 117 aa2.16□□□□□ -2.06
snR43snR43 DEP1P31385 405 aa2.16□□□□□ -2.06
snR43snR43 SIP2P34164 415 aaKnown RBP2.16□□□□□ -2.06
snR43snR43 PRY2P36110 329 aa2.16□□□□□ -2.06
snR43snR43 YBR096WP38256 230 aa2.16□□□□□ -2.06
snR43snR43 YBR138CP38277 524 aa2.16□□□□□ -2.06
snR43snR43 ICS2P38284 255 aa2.16□□□□□ -2.06
snR43snR43 RCY1P39531 840 aa2.16□□□□□ -2.06
snR43snR43 ISC1P40015 477 aaKnown RBP2.16□□□□□ -2.06
snR43snR43 YER121WP40076 114 aa2.16□□□□□ -2.06
snR43snR43 BUR6P40096 142 aa2.16□□□□□ -2.06
snR43snR43 YGR201CP42936 225 aa2.16□□□□□ -2.06
snR43snR43 NUP57P48837 541 aa2.16□□□□□ -2.06
snR43snR43 IMD4P50094 524 aaKnown RBP2.16□□□□□ -2.06
snR43snR43 SHE4P51534 789 aa2.16□□□□□ -2.06
snR43snR43 UBC13P52490 153 aa2.16□□□□□ -2.06
snR43snR43 YNR071CP53757 342 aa2.16□□□□□ -2.06
snR43snR43 APM1Q00776 475 aaPredicted RBP2.16□□□□□ -2.06
snR43snR43 TAZ1Q06510 381 aa2.16□□□□□ -2.06
snR43snR43 CSI2Q08054 341 aa2.16□□□□□ -2.06
snR43snR43 ULA1Q12059 462 aa2.16□□□□□ -2.06
snR43snR43 MED2Q12124 431 aa2.16□□□□□ -2.06
snR43snR43 FRE8Q12209 686 aa2.16□□□□□ -2.06
snR43snR43 SFM1Q12314 213 aa2.16□□□□□ -2.06
snR43snR43 RNH203Q12338 110 aa2.16□□□□□ -2.06
snR43snR43 HMS1Q12398 434 aa2.16□□□□□ -2.06
snR43snR43 APC2Q12440 853 aa2.16□□□□□ -2.06
snR43snR43 YML003WP0CF16 290 aa2.15□□□□□ -2.07
snR43snR43 ARO3P14843 370 aaKnown RBP2.15□□□□□ -2.07
snR43snR43 MDM10P18409 493 aa2.15□□□□□ -2.07
snR43snR43 CCA1P21269 546 aa2.15□□□□□ -2.07
snR43snR43 POL4P25615 582 aa2.15□□□□□ -2.07
snR43snR43 CNE1P27825 502 aa2.15□□□□□ -2.07
snR43snR43 MDL1P33310 695 aa2.15□□□□□ -2.07
snR43snR43 NIC96P34077 839 aa2.15□□□□□ -2.07
snR43snR43 JEN1P36035 616 aa2.15□□□□□ -2.07
snR43snR43 YKL071WP36086 256 aa2.15□□□□□ -2.07
snR43snR43 IST2P38250 946 aa2.15□□□□□ -2.07
snR43snR43 NAB3P38996 802 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
snR43snR43 ATF1P40353 525 aa2.15□□□□□ -2.07
snR43snR43 MET28P40573 187 aa2.15□□□□□ -2.07
snR43snR43 IAH1P41734 238 aa2.15□□□□□ -2.07
snR43snR43 DPB11P47027 764 aaPredicted RBP2.15□□□□□ -2.07
snR43snR43 TAX4P47030 604 aa2.15□□□□□ -2.07
snR43snR43 YHC3P47040 408 aa2.15□□□□□ -2.07
snR43snR43 ARC35P53731 342 aaKnown RBP2.15□□□□□ -2.07
snR43snR43 YDR102CQ03864 110 aa2.15□□□□□ -2.07
snR43snR43 YDR387CQ04162 555 aa2.15□□□□□ -2.07
snR43snR43 RAD33Q04231 177 aa2.15□□□□□ -2.07
snR43snR43 KRE28Q04431 385 aa2.15□□□□□ -2.07
snR43snR43 GGA1Q06336 557 aa2.15□□□□□ -2.07
snR43snR43 NDL1Q06568 189 aa2.15□□□□□ -2.07
snR43snR43 IPK1Q06667 281 aa2.15□□□□□ -2.07
snR43snR43 PSR1Q07800 427 aa2.15□□□□□ -2.07
snR43snR43 MIM1Q08176 113 aa2.15□□□□□ -2.07
snR43snR43 YPL191CQ08930 360 aa2.15□□□□□ -2.07
snR43snR43 NSL1Q12143 216 aa2.15□□□□□ -2.07
snR43snR43 YCL048W-AQ2V2Q2 79 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms