RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W YLR456WQ06199 204 aa5.32□□□□□ -1.56
RPN7YPR108W BSC6Q08280 497 aa5.32□□□□□ -1.56
RPN7YPR108W GUP2Q08929 609 aa5.32□□□□□ -1.56
RPN7YPR108W YMR084WA2P2R3 262 aa5.31□□□□□ -1.56
RPN7YPR108W RPL20AP0CX23 172 aaKnown RBP5.31□□□□□ -1.56
RPN7YPR108W RPL20BP0CX24 172 aaPredicted RBP5.31□□□□□ -1.56
RPN7YPR108W MRPL33P20084 86 aa5.31□□□□□ -1.56
RPN7YPR108W RNA14P25298 677 aaKnown RBP5.31□□□□□ -1.56
RPN7YPR108W KRR1P25586 316 aaPredicted RBP5.31□□□□□ -1.56
RPN7YPR108W RFA3P26755 122 aaKnown RBP5.31□□□□□ -1.56
RPN7YPR108W EHD3P28817 500 aa5.31□□□□□ -1.56
RPN7YPR108W ZRT3P34240 503 aa5.31□□□□□ -1.56
RPN7YPR108W THI2P38141 450 aa5.31□□□□□ -1.56
RPN7YPR108W YHR180WP38868 163 aa5.31□□□□□ -1.56
RPN7YPR108W PKP1P40530 394 aa5.31□□□□□ -1.56
RPN7YPR108W YKE4P40544 346 aa5.31□□□□□ -1.56
RPN7YPR108W QRI7P43122 407 aa5.31□□□□□ -1.56
RPN7YPR108W DIE2P50076 525 aa5.31□□□□□ -1.56
RPN7YPR108W PHB2P50085 310 aa5.31□□□□□ -1.56
RPN7YPR108W SUN4P53616 420 aa5.31□□□□□ -1.56
RPN7YPR108W CWC24P53769 259 aa5.31□□□□□ -1.56
RPN7YPR108W YDR541CQ03049 344 aa5.31□□□□□ -1.56
RPN7YPR108W MRPL1Q04599 285 aa5.31□□□□□ -1.56
RPN7YPR108W AVO1Q08236 1176 aa5.31□□□□□ -1.56
RPN7YPR108W FRE3Q08905 711 aa5.31□□□□□ -1.56
RPN7YPR108W RLM1Q12224 676 aa5.31□□□□□ -1.56
RPN7YPR108W RAD52P06778 471 aaKnown RBP5.3□□□□□ -1.56
RPN7YPR108W DSF1P0CX08 502 aa5.3□□□□□ -1.56
RPN7YPR108W YNR073CP0CX09 502 aa5.3□□□□□ -1.56
RPN7YPR108W RPS18AP0CX55 146 aaKnown RBP5.3□□□□□ -1.56
RPN7YPR108W RPS18BP0CX56 146 aaPredicted RBP5.3□□□□□ -1.56
RPN7YPR108W MATALPHA1P0CY06 175 aa5.3□□□□□ -1.56
RPN7YPR108W HMLALPHA1P0CY07 175 aa5.3□□□□□ -1.56
RPN7YPR108W ARF1P11076 181 aaKnown RBP5.3□□□□□ -1.56
RPN7YPR108W ERD1P16151 362 aa5.3□□□□□ -1.56
RPN7YPR108W PDX1P16451 410 aa5.3□□□□□ -1.56
RPN7YPR108W NCP1P16603 691 aaKnown RBP5.3□□□□□ -1.56
RPN7YPR108W SEN2P16658 377 aa5.3□□□□□ -1.56
RPN7YPR108W STF2P16965 84 aa5.3□□□□□ -1.56
RPN7YPR108W GPI12P23797 304 aa5.3□□□□□ -1.56
RPN7YPR108W BOS1P25385 244 aa5.3□□□□□ -1.56
RPN7YPR108W PRE2P30656 287 aaKnown RBP5.3□□□□□ -1.56
RPN7YPR108W MDH3P32419 343 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
RPN7YPR108W SNC2P33328 115 aa5.3□□□□□ -1.56
RPN7YPR108W WBP1P33767 430 aaKnown RBP5.3□□□□□ -1.56
RPN7YPR108W UTP30P36144 274 aaKnown RBP5.3□□□□□ -1.56
RPN7YPR108W APL3P38065 1025 aa5.3□□□□□ -1.56
RPN7YPR108W COS8P38723 381 aa5.3□□□□□ -1.56
RPN7YPR108W MSS4P38994 779 aa5.3□□□□□ -1.56
RPN7YPR108W FMP52P40008 231 aa5.3□□□□□ -1.56
RPN7YPR108W LTP1P40347 161 aa5.3□□□□□ -1.56
RPN7YPR108W SLM1P40485 686 aa5.3□□□□□ -1.56
RPN7YPR108W YIL086CP40503 102 aa5.3□□□□□ -1.56
RPN7YPR108W CIS3P47001 227 aa5.3□□□□□ -1.56
RPN7YPR108W SEH1P53011 349 aaKnown RBP5.3□□□□□ -1.56
RPN7YPR108W PPT1P53043 513 aa5.3□□□□□ -1.56
RPN7YPR108W ORM1P53224 222 aa5.3□□□□□ -1.56
RPN7YPR108W FHN1P53279 174 aa5.3□□□□□ -1.56
RPN7YPR108W MPP6P53725 186 aaPredicted RBP5.3□□□□□ -1.56
RPN7YPR108W PDR16P53860 351 aaKnown RBP5.3□□□□□ -1.56
RPN7YPR108W YLR152CP54072 576 aa5.3□□□□□ -1.56
RPN7YPR108W YVH1Q02256 364 aaKnown RBP5.3□□□□□ -1.56
RPN7YPR108W YPL039WQ03080 316 aa5.3□□□□□ -1.56
RPN7YPR108W HNT1Q04344 158 aaKnown RBP5.3□□□□□ -1.56
RPN7YPR108W STP3Q05937 343 aa5.3□□□□□ -1.56
RPN7YPR108W PHO92Q06390 306 aa5.3□□□□□ -1.56
RPN7YPR108W SYC1Q08553 188 aaPredicted RBP5.3□□□□□ -1.56
RPN7YPR108W YPT1P01123 206 aaKnown RBP5.29□□□□□ -1.56
RPN7YPR108W YPK2P18961 677 aa5.29□□□□□ -1.56
RPN7YPR108W RPA135P22138 1203 aaKnown RBP5.29□□□□□ -1.56
RPN7YPR108W YCR100CP25606 316 aa5.29□□□□□ -1.56
RPN7YPR108W ACP1P32463 125 aa5.29□□□□□ -1.56
RPN7YPR108W VMA8P32610 256 aaKnown RBP5.29□□□□□ -1.56
RPN7YPR108W RPC34P32910 317 aa5.29□□□□□ -1.56
RPN7YPR108W CLG1P35190 452 aa5.29□□□□□ -1.56
RPN7YPR108W MTC4P38335 694 aaKnown RBP5.29□□□□□ -1.56
RPN7YPR108W MBP1P39678 833 aa5.29□□□□□ -1.56
RPN7YPR108W TED1P40533 473 aa5.29□□□□□ -1.56
RPN7YPR108W UBX6P47049 396 aa5.29□□□□□ -1.56
RPN7YPR108W SRB7P47822 140 aa5.29□□□□□ -1.56
RPN7YPR108W TOS2P50078 622 aa5.29□□□□□ -1.56
RPN7YPR108W HSV2P50079 448 aaPredicted RBP5.29□□□□□ -1.56
RPN7YPR108W DOC1P53068 250 aa5.29□□□□□ -1.56
RPN7YPR108W RMD9P53140 646 aaKnown RBP5.29□□□□□ -1.56
RPN7YPR108W VPS73P53142 486 aaKnown RBP5.29□□□□□ -1.56
RPN7YPR108W TPC1P53257 314 aa5.29□□□□□ -1.56
RPN7YPR108W GTF1P53260 183 aaPredicted RBP5.29□□□□□ -1.56
RPN7YPR108W SYF2P53277 215 aaPredicted RBP5.29□□□□□ -1.56
RPN7YPR108W RSM27P53305 110 aa5.29□□□□□ -1.56
RPN7YPR108W SCW4P53334 386 aaKnown RBP5.29□□□□□ -1.56
RPN7YPR108W EKI1Q03764 534 aa5.29□□□□□ -1.56
RPN7YPR108W SNX41Q04053 625 aa5.29□□□□□ -1.56
RPN7YPR108W UTP15Q04305 513 aaKnown RBP5.29□□□□□ -1.56
RPN7YPR108W THI72Q08579 599 aa5.29□□□□□ -1.56
RPN7YPR108W FRE5Q08908 694 aa5.29□□□□□ -1.56
RPN7YPR108W ATG31Q12421 196 aa5.29□□□□□ -1.56
RPN7YPR108W TFB5Q3E7C1 72 aaPredicted RBP5.29□□□□□ -1.56
RPN7YPR108W CDC9P04819 755 aa5.28□□□□□ -1.56
RPN7YPR108W RPP1AP05318 106 aaPredicted RBP5.28□□□□□ -1.56
RPN7YPR108W PRB1P09232 635 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms