RNA–Protein interactions for RNA: YPL260W

YPL260W, Transcript of Putative substrate of cAMP-dependent protein kinase (PKA), yeast

Gene YPL260W, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL260W	YPL260W	PKR1	Q03880	122 aa	Known RBP	4.1	□□□□□ -1.75
YPL260W	YPL260W	VBA1	Q04301	562 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	AVO2	Q04749	426 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	ECM22	Q05958	814 aa	Predicted RBP	4.1	□□□□□ -1.75
YPL260W	YPL260W	PUS5	Q06244	254 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	TEN1	Q07921	160 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	THI72	Q08579	599 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	YMR030W-A	Q3E760	96 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	RPS9A	O13516	197 aa	Known RBP	4.1	□□□□□ -1.75
YPL260W	YPL260W	TY1A-H	P0C2I4	478 aa	Known RBP	4.1	□□□□□ -1.75
YPL260W	YPL260W	YML003W	P0CF16	290 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	RPS4A	P0CX35	261 aa	Known RBP	4.1	□□□□□ -1.75
YPL260W	YPL260W	RPS4B	P0CX36	261 aa	Known RBP	4.1	□□□□□ -1.75
YPL260W	YPL260W	TIR1	P10863	254 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	TFS1	P14306	219 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	PPH21	P23594	369 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	ARE1	P25628	610 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	YCR099C	P25657	155 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	MRP20	P32387	263 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	MSN2	P33748	704 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	YKL151C	P36059	337 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	ALY1	P36117	915 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	YBR197C	P38306	217 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	SRP68	P38687	599 aa	Known RBP	4.1	□□□□□ -1.75
YPL260W	YPL260W	ARP1	P38696	384 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	SMB1	P40018	196 aa	Known RBP	4.1	□□□□□ -1.75
YPL260W	YPL260W	ICP55	P40051	511 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	AVT7	P40501	490 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	YIL012W	P40551	113 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	FET4	P40988	552 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	YFL040W	P43562	540 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	MOB2	P43563	287 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	YJL132W	P47014	750 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	AIM25	P47140	327 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	HMS2	P47175	358 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	BUL1	P48524	976 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	YGR053C	P53234	283 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	YGR117C	P53270	476 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	YGR126W	P53274	230 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	FRE4	P53746	719 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	AAH1	P53909	347 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	LSM3	P57743	89 aa	Known RBP	4.1	□□□□□ -1.75
YPL260W	YPL260W	YDR132C	Q03900	495 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	PAU23	Q07987	124 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	YOR378W	Q08902	515 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	TGS1	Q12052	315 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	NUS1	Q12063	375 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	UPC2	Q12151	913 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	PST1	Q12355	444 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	PAU17	Q12370	124 aa		4.1	□□□□□ -1.75
YPL260W	YPL260W	YEL009C-A	A0A023PZF2	135 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	CYC7	P00045	113 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	QCR7	P00128	127 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	COX2	P00410	251 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	GDH1	P07262	454 aa	Known RBP	4.09	□□□□□ -1.76
YPL260W	YPL260W	PAU19	P0CE85	124 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	PAU21	P0CE86	164 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	PAU22	P0CE87	164 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	RPB5	P20434	215 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	NUP1	P20676	1076 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	SEC22	P22214	214 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	PUT3	P25502	979 aa	Predicted RBP	4.09	□□□□□ -1.76
YPL260W	YPL260W	VBA3	P25594	458 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	PAU3	P25610	124 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	URK1	P27515	501 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	ADE1	P27616	306 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	CDC5	P32562	705 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	SEC17	P32602	292 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	TIP20	P33891	701 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	SCD5	P34758	872 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	MRPL11	P36521	249 aa	Predicted RBP	4.09	□□□□□ -1.76
YPL260W	YPL260W	YHR177W	P38867	453 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	GET2	P40056	285 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	PRM2	P40534	656 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	MGA1	P53050	456 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	MTL1	P53214	551 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	YGR035C	P53222	116 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	GTR2	P53290	341 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	YVH1	Q02256	364 aa	Known RBP	4.09	□□□□□ -1.76
YPL260W	YPL260W	ELC1	Q03071	99 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	MSC2	Q03455	724 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	RCE1	Q03530	315 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	MSS11	Q03825	758 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	RRP45	Q05636	305 aa	Known RBP	4.09	□□□□□ -1.76
YPL260W	YPL260W	CNL1	Q06333	122 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	BSC6	Q08280	497 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	MCA1	Q08601	432 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	FRE8	Q12209	686 aa		4.09	□□□□□ -1.76
YPL260W	YPL260W	AIM45	Q12480	344 aa	Known RBP	4.09	□□□□□ -1.76
YPL260W	YPL260W	RPL13A	Q12690	199 aa	Predicted RBP	4.09	□□□□□ -1.76
YPL260W	YPL260W	TDH2	P00358	332 aa	Known RBP	4.08	□□□□□ -1.76
YPL260W	YPL260W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
YPL260W	YPL260W	ILV5	P06168	395 aa	Known RBP	4.08	□□□□□ -1.76
YPL260W	YPL260W	YER190C-B	P0CX94	160 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	YEL077W-A	P0CX95	160 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	YGR296C-B	P0CX96	160 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	YPL283W-B	P0CX97	160 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	YPR204C-A	P0CX98	160 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	HAP4	P14064	554 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	APE1	P14904	514 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms