RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	RPL10	P41805	221 aa	Known RBP	1.35	□□□□□ -2.19
RLM1	YPL089C	YGL262W	P53054	175 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	MNT4	P53745	580 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	KTR6	P54070	446 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	HAL1	Q01766	294 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	PET117	Q02771	107 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	VHS1	Q03785	461 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	YMR244W	Q04018	355 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	API2	Q04413	109 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	SEC13	Q04491	297 aa	Known RBP	1.35	□□□□□ -2.19
RLM1	YPL089C	ADH6	Q04894	360 aa	Known RBP	1.35	□□□□□ -2.19
RLM1	YPL089C	TAF9	Q05027	157 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	VIK1	Q12045	647 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	PER33	Q12144	273 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	RUD3	Q12234	484 aa	Known RBP	1.35	□□□□□ -2.19
RLM1	YPL089C	RAX2	Q12465	1220 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	PET494	P07390	489 aa	Predicted RBP	1.35	□□□□□ -2.19
RLM1	YPL089C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	1.35	□□□□□ -2.19	not detected
RLM1	YPL089C	CDC42	P19073	191 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	SUA5	P32579	426 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	UTH1	P36135	365 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	FRM2	P37261	193 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	MBA1	P38300	278 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	RRT13	P40042	185 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	DDI1	P40087	428 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	IBA57	P47158	497 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	YGR018C	P53211	109 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	RNY1	Q02933	434 aa	Known RBP	1.35	□□□□□ -2.19
RLM1	YPL089C	CTR3	Q06686	241 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	PAM18	Q07914	168 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	YOL029C	Q08187	201 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	YPL278C	Q08990	100 aa		1.35	□□□□□ -2.19
RLM1	YPL089C	ADH1	P00330	348 aa	Known RBP	1.34	□□□□□ -2.19
RLM1	YPL089C	RPS3	P05750	240 aa	Known RBP	1.34	□□□□□ -2.19
RLM1	YPL089C	CBP6	P07253	162 aa	Predicted RBP	1.34	□□□□□ -2.19
RLM1	YPL089C	YCR016W	P25617	290 aa	Known RBP	1.34	□□□□□ -2.19
RLM1	YPL089C	ZRT3	P34240	503 aa		1.34	□□□□□ -2.19
RLM1	YPL089C	ATG12	P38316	186 aa		1.34	□□□□□ -2.19
RLM1	YPL089C	PRS2	P38620	318 aa	Known RBP	1.34	□□□□□ -2.19
RLM1	YPL089C	YER085C	P40058	173 aa		1.34	□□□□□ -2.19
RLM1	YPL089C	RRG9	P40156	214 aa		1.34	□□□□□ -2.19
RLM1	YPL089C	ASG7	P46993	209 aa		1.34	□□□□□ -2.19
RLM1	YPL089C	NBP1	P52919	319 aa	Predicted RBP	1.34	□□□□□ -2.19
RLM1	YPL089C	TRM44	Q02648	567 aa	Known RBP	1.34	□□□□□ -2.19
RLM1	YPL089C	YML018C	Q03730	393 aa		1.34	□□□□□ -2.19
RLM1	YPL089C	LOA1	Q06508	300 aa		1.34	□□□□□ -2.19
RLM1	YPL089C	MSH5	Q12175	901 aa		1.34	□□□□□ -2.19
RLM1	YPL089C	SME1	Q12330	94 aa	Predicted RBP	1.34	□□□□□ -2.19
RLM1	YPL089C	YAL067W-A	Q8TGK6	75 aa		1.34	□□□□□ -2.19
RLM1	YPL089C	YOL085C	Q99345	113 aa		1.34	□□□□□ -2.19
RLM1	YPL089C	CFT1	Q06632	1357 aa	Known RBP	1.34	□□□□□ -2.2
RLM1	YPL089C	YAL064W-B	O13512	126 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	YCR025C	P25352	136 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	ZIP1	P31111	875 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	SRB4	P32569	687 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	MSN4	P33749	630 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	MRPL3	P36516	390 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	MRX3	P38172	270 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	ECM34	P38728	170 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	1.33	□□□□□ -2.2	not detected
RLM1	YPL089C	AVT7	P40501	490 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	SER33	P40510	469 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	GCN20	P43535	752 aa	Known RBP	1.33	□□□□□ -2.2
RLM1	YPL089C	YFL064C	P43540	174 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	YJR012C	P47087	207 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	NBP35	P52920	328 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	MAL13	P53338	473 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	MRPL50	P53724	139 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	YPL113C	Q02961	396 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	VPS60	Q03390	229 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	UTP15	Q04305	513 aa	Known RBP	1.33	□□□□□ -2.2
RLM1	YPL089C	ECM19	Q06011	112 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	SEC10	Q06245	871 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	TRM10	Q12400	293 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	PSK1	P31374	1356 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	TPI1	P00942	248 aa	Known RBP	1.33	□□□□□ -2.2
RLM1	YPL089C	IMP1	P28627	190 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	NTG1	P31378	399 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	QRI5	P32344	111 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	DBP7	P36120	742 aa	Known RBP	1.33	□□□□□ -2.2
RLM1	YPL089C	AIM29	P36154	155 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	MRP21	P38175	177 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	SHC1	P39000	512 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	YER184C	P39961	794 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	KRE29	P40026	464 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	RTR1	P40084	226 aa	Predicted RBP	1.33	□□□□□ -2.2
RLM1	YPL089C	MIC19	P43594	170 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	GLG2	P47011	380 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	COG7	P53195	279 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	SWS2	P53937	143 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	CWC21	Q03375	135 aa	Known RBP	1.33	□□□□□ -2.2
RLM1	YPL089C	EBS1	Q03466	884 aa	Known RBP	1.33	□□□□□ -2.2
RLM1	YPL089C	YDR209C	Q03480	137 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	MYO5	Q04439	1219 aa	Known RBP	1.33	□□□□□ -2.2
RLM1	YPL089C	YLR283W	Q05867	314 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	MCH1	Q07376	486 aa		1.33	□□□□□ -2.2
RLM1	YPL089C	RLP24	Q07915	199 aa	Known RBP	1.33	□□□□□ -2.2
RLM1	YPL089C	SGT2	Q12118	346 aa	Known RBP	1.33	□□□□□ -2.2
RLM1	YPL089C	TIR4	Q12218	487 aa	Predicted RBP	1.33	□□□□□ -2.2
RLM1	YPL089C	TDH2	P00358	332 aa	Known RBP	1.32	□□□□□ -2.2

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms